RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 NBPF15Q8N660 670 aa27.45■■□□□ 1.98
ARF1-206ENST00000473949 PNISRQ8TF01 805 aaKnown RBP27.45■■□□□ 1.98
ARF1-206ENST00000473949 CNKSR1Q969H4 720 aa27.45■■□□□ 1.98
ARF1-206ENST00000473949 CCDC88AQ3V6T2 1871 aa27.44■■□□□ 1.98
ARF1-206ENST00000473949 MAPK8IP3Q9UPT6 1336 aa27.44■■□□□ 1.98
ARF1-206ENST00000473949 DLG5Q8TDM6 1919 aa27.44■■□□□ 1.98
ARF1-206ENST00000473949 FSTL1Q12841 308 aa27.44■■□□□ 1.98
ARF1-206ENST00000473949 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
ARF1-206ENST00000473949 PNNQ9H307 717 aaKnown RBP27.44■■□□□ 1.98
ARF1-206ENST00000473949 GLTPD2A6NH11 291 aa27.43■■□□□ 1.98
ARF1-206ENST00000473949 NFE2L2Q16236 605 aa27.43■■□□□ 1.98
ARF1-206ENST00000473949 STYK1Q6J9G0 422 aa27.43■■□□□ 1.98
ARF1-206ENST00000473949 MASTLQ96GX5 879 aa27.43■■□□□ 1.98
ARF1-206ENST00000473949 NIP7Q9Y221 180 aaKnown RBP eCLIP27.43■■□□□ 1.98
ARF1-206ENST00000473949 TIAM2Q8IVF5 1701 aa27.43■■□□□ 1.98
ARF1-206ENST00000473949 SRGNP10124 158 aa27.42■■□□□ 1.98
ARF1-206ENST00000473949 FAM177BA6PVY3 158 aa27.41■■□□□ 1.98
ARF1-206ENST00000473949 PRPF40BQ6NWY9 871 aaKnown RBP27.41■■□□□ 1.98
ARF1-206ENST00000473949 NGEFQ8N5V2 710 aa27.41■■□□□ 1.98
ARF1-206ENST00000473949 THUMPD2Q9BTF0 503 aaKnown RBP27.41■■□□□ 1.98
ARF1-206ENST00000473949 CACNA1SQ13698 1873 aa27.4■■□□□ 1.98
ARF1-206ENST00000473949 ERFEQ4G0M1 354 aa27.4■■□□□ 1.98
ARF1-206ENST00000473949 TPTE2Q6XPS3 522 aa27.4■■□□□ 1.98
ARF1-206ENST00000473949 LAMB4A4D0S4 1761 aa27.4■■□□□ 1.98
ARF1-206ENST00000473949 VEGFAP15692 232 aaPredicted RBP27.39■■□□□ 1.98
ARF1-206ENST00000473949 DPY19L2Q6NUT2 758 aa27.39■■□□□ 1.98
ARF1-206ENST00000473949 TAOK3Q9H2K8 898 aa27.39■■□□□ 1.98
ARF1-206ENST00000473949 KDM3BQ7LBC6 1761 aa27.38■■□□□ 1.97
ARF1-206ENST00000473949 SOGA3Q5TF21 947 aa27.38■■□□□ 1.97
ARF1-206ENST00000473949 SMC1BQ8NDV3 1235 aa27.38■■□□□ 1.97
ARF1-206ENST00000473949 SLX4Q8IY92 1834 aa27.37■■□□□ 1.97
ARF1-206ENST00000473949 RGL2O15211 777 aa27.37■■□□□ 1.97
ARF1-206ENST00000473949 HLFQ16534 295 aa27.37■■□□□ 1.97
ARF1-206ENST00000473949 FER1L6Q2WGJ9 1857 aa27.37■■□□□ 1.97
ARF1-206ENST00000473949 RRP7AQ9Y3A4 280 aaKnown RBP27.37■■□□□ 1.97
ARF1-206ENST00000473949 WDR90Q96KV7 1748 aa27.36■■□□□ 1.97
ARF1-206ENST00000473949 GTF2E1P29083 439 aaPredicted RBP27.36■■□□□ 1.97
ARF1-206ENST00000473949 EIF4A1P60842 406 aaKnown RBP27.36■■□□□ 1.97
ARF1-206ENST00000473949 NPR1P16066 1061 aa27.35■■□□□ 1.97
ARF1-206ENST00000473949 HTRA3P83110 453 aa27.35■■□□□ 1.97
ARF1-206ENST00000473949 LTBP3Q9NS15 1303 aa27.35■■□□□ 1.97
ARF1-206ENST00000473949 RALBP1Q15311 655 aa27.34■■□□□ 1.97
ARF1-206ENST00000473949 DNAJC5GQ8N7S2 189 aa27.34■■□□□ 1.97
ARF1-206ENST00000473949 ARFGEF2Q9Y6D5 1785 aa27.33■■□□□ 1.97
ARF1-206ENST00000473949 MYL6BP14649 208 aa27.33■■□□□ 1.97
ARF1-206ENST00000473949 KIF6Q6ZMV9 814 aa27.33■■□□□ 1.97
ARF1-206ENST00000473949 DICER1Q9UPY3 1922 aaKnown RBP27.32■■□□□ 1.96
ARF1-206ENST00000473949 CCDC93Q567U6 631 aa27.31■■□□□ 1.96
ARF1-206ENST00000473949 TSPYL4Q9UJ04 414 aa27.31■■□□□ 1.96
ARF1-206ENST00000473949 ERVV-1B6SEH8 477 aa27.3■■□□□ 1.96
ARF1-206ENST00000473949 RIPK4P57078 832 aa27.3■■□□□ 1.96
ARF1-206ENST00000473949 NYXQ9GZU5 481 aa27.3■■□□□ 1.96
ARF1-206ENST00000473949 MAP3K15Q6ZN16 1313 aa27.3■■□□□ 1.96
ARF1-206ENST00000473949 KLRG2A4D1S0 409 aaPredicted RBP27.29■■□□□ 1.96
ARF1-206ENST00000473949 TTLL7Q6ZT98 887 aa27.29■■□□□ 1.96
ARF1-206ENST00000473949 DDX10Q13206 875 aaKnown RBP27.28■■□□□ 1.96
ARF1-206ENST00000473949 ZBTB3Q9H5J0 574 aa27.28■■□□□ 1.96
ARF1-206ENST00000473949 IFFO2Q5TF58 517 aa27.27■■□□□ 1.96
ARF1-206ENST00000473949 NUTM1Q86Y26 1132 aa27.27■■□□□ 1.96
ARF1-206ENST00000473949 C7orf43Q8WVR3 580 aa27.27■■□□□ 1.96
ARF1-206ENST00000473949 KLRG1Q96E93 195 aa27.27■■□□□ 1.96
ARF1-206ENST00000473949 POTECB2RU33 542 aa27.26■■□□□ 1.95
ARF1-206ENST00000473949 GPTP24298 496 aa27.26■■□□□ 1.95
ARF1-206ENST00000473949 ALDH1B1P30837 517 aa27.26■■□□□ 1.95
ARF1-206ENST00000473949 NUP98P52948 1817 aa27.25■■□□□ 1.95
ARF1-206ENST00000473949 DDNO94850 711 aaPredicted RBP27.25■■□□□ 1.95
ARF1-206ENST00000473949 EIF2S2P20042 333 aaKnown RBP27.24■■□□□ 1.95
ARF1-206ENST00000473949 FKBP4Q02790 459 aaKnown RBP eCLIP27.24■■□□□ 1.956e-6■□□□□ 9.8
ARF1-206ENST00000473949 LMOD3Q0VAK6 560 aa27.24■■□□□ 1.95
ARF1-206ENST00000473949 OLFM4Q6UX06 510 aa27.24■■□□□ 1.95
ARF1-206ENST00000473949 ABCC12Q96J65 1359 aa27.23■■□□□ 1.95
ARF1-206ENST00000473949 ERBB4Q15303 1308 aa27.23■■□□□ 1.95
ARF1-206ENST00000473949 MYBBP1AQ9BQG0 1328 aaKnown RBP27.23■■□□□ 1.95
ARF1-206ENST00000473949 TMPOP42166 694 aaKnown RBP27.23■■□□□ 1.95
ARF1-206ENST00000473949 RTKN2Q8IZC4 609 aa27.23■■□□□ 1.95
ARF1-206ENST00000473949 ZNF277Q9NRM2 450 aaPredicted RBP27.23■■□□□ 1.95
ARF1-206ENST00000473949 NEUROD2Q15784 382 aa27.21■■□□□ 1.95
ARF1-206ENST00000473949 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
ARF1-206ENST00000473949 UBN2Q6ZU65 1347 aa27.2■■□□□ 1.95
ARF1-206ENST00000473949 SUSD4Q5VX71 490 aa27.2■■□□□ 1.94
ARF1-206ENST00000473949 RPGRQ92834 1020 aaKnown RBP27.2■■□□□ 1.94
ARF1-206ENST00000473949 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
ARF1-206ENST00000473949 BABAM1Q9NWV8 329 aa27.19■■□□□ 1.94
ARF1-206ENST00000473949 WDR43Q15061 677 aaKnown RBP eCLIP27.18■■□□□ 1.94
ARF1-206ENST00000473949 CRY2Q49AN0 593 aa27.18■■□□□ 1.94
ARF1-206ENST00000473949 IBTKQ9P2D0 1353 aaPredicted RBP27.18■■□□□ 1.94
ARF1-206ENST00000473949 IQCA1LA6NCM1 817 aa27.17■■□□□ 1.94
ARF1-206ENST00000473949 PPP1R42Q7Z4L9 355 aa27.17■■□□□ 1.94
ARF1-206ENST00000473949 ZNF34Q8IZ26 560 aa27.17■■□□□ 1.94
ARF1-206ENST00000473949 SYNE4Q8N205 404 aa27.17■■□□□ 1.94
ARF1-206ENST00000473949 NECTIN2Q92692 538 aa27.17■■□□□ 1.94
ARF1-206ENST00000473949 ANXA1P04083 346 aa27.16■■□□□ 1.94
ARF1-206ENST00000473949 IARSP41252 1262 aaKnown RBP27.16■■□□□ 1.94
ARF1-206ENST00000473949 JMYQ8N9B5 988 aa27.16■■□□□ 1.94
ARF1-206ENST00000473949 LAS1LQ9Y4W2 734 aaKnown RBP27.16■■□□□ 1.94
ARF1-206ENST00000473949 PDIA6Q15084 440 aa27.15■■□□□ 1.94
ARF1-206ENST00000473949 CHADLQ6NUI6 762 aa27.15■■□□□ 1.94
ARF1-206ENST00000473949 NTSR2O95665 410 aa27.14■■□□□ 1.94
ARF1-206ENST00000473949 POTEIP0CG38 1075 aa27.14■■□□□ 1.94
ARF1-206ENST00000473949 POTEJP0CG39 1038 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms