RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 KDM2BQ8NHM5 1336 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 TOMM70O94826 608 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 PLEKHF1Q96S99 279 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 BRIP1Q9BX63 1249 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 RRAGCQ9HB90 399 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 ZNF652Q9Y2D9 606 aa15.8■□□□□ 0.12
SMPD4-217ENST00000473720 NBPF26B4DH59 902 aa15.79■□□□□ 0.12
SMPD4-217ENST00000473720 C21orf2O43822 256 aa15.79■□□□□ 0.12
SMPD4-217ENST00000473720 NBPF10Q6P3W6 841 aaKnown RBP15.79■□□□□ 0.12
SMPD4-217ENST00000473720 NBPF5PQ86XG9 351 aaPredicted RBP15.79■□□□□ 0.12
SMPD4-217ENST00000473720 NBPF15Q8N660 670 aa15.79■□□□□ 0.12
SMPD4-217ENST00000473720 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
SMPD4-217ENST00000473720 LMNB1P20700 586 aa15.78■□□□□ 0.12
SMPD4-217ENST00000473720 NIP7Q9Y221 180 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMPD4-217ENST00000473720 RRP7AQ9Y3A4 280 aaKnown RBP15.78■□□□□ 0.12
SMPD4-217ENST00000473720 MYL6BP14649 208 aa15.77■□□□□ 0.12
SMPD4-217ENST00000473720 PRELPP51888 382 aa15.77■□□□□ 0.12
SMPD4-217ENST00000473720 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
SMPD4-217ENST00000473720 NFKBIEO00221 500 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 RALBP1Q15311 655 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 HLFQ16534 295 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 PDZRN3Q9UPQ7 1066 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 CEP350Q5VT06 3117 aa15.76■□□□□ 0.11
SMPD4-217ENST00000473720 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-217ENST00000473720 RIPK4P57078 832 aa15.75■□□□□ 0.11
SMPD4-217ENST00000473720 EIF4A1P60842 406 aaKnown RBP15.75■□□□□ 0.11
SMPD4-217ENST00000473720 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
SMPD4-217ENST00000473720 CNKSR1Q969H4 720 aa15.75■□□□□ 0.11
SMPD4-217ENST00000473720 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
SMPD4-217ENST00000473720 SRGNP10124 158 aa15.74■□□□□ 0.11
SMPD4-217ENST00000473720 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
SMPD4-217ENST00000473720 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
SMPD4-217ENST00000473720 MASTLQ96GX5 879 aa15.74■□□□□ 0.11
SMPD4-217ENST00000473720 TSPYL4Q9UJ04 414 aa15.74■□□□□ 0.11
SMPD4-217ENST00000473720 STYK1Q6J9G0 422 aa15.73■□□□□ 0.11
SMPD4-217ENST00000473720 TPTE2Q6XPS3 522 aa15.73■□□□□ 0.11
SMPD4-217ENST00000473720 KIF6Q6ZMV9 814 aa15.73■□□□□ 0.11
SMPD4-217ENST00000473720 RBM46Q8TBY0 533 aaKnown RBP15.73■□□□□ 0.11
SMPD4-217ENST00000473720 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
SMPD4-217ENST00000473720 APLP1P51693 650 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 TTLL7Q6ZT98 887 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 ZBTB3Q9H5J0 574 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 LAMB2P55268 1798 aa15.72■□□□□ 0.11
SMPD4-217ENST00000473720 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.11
SMPD4-217ENST00000473720 GPTP24298 496 aa15.71■□□□□ 0.11
SMPD4-217ENST00000473720 TMPOP42166 694 aaKnown RBP15.71■□□□□ 0.11
SMPD4-217ENST00000473720 HTRA3P83110 453 aa15.71■□□□□ 0.11
SMPD4-217ENST00000473720 NUTM1Q86Y26 1132 aa15.71■□□□□ 0.11
SMPD4-217ENST00000473720 NECTIN2Q92692 538 aa15.71■□□□□ 0.11
SMPD4-217ENST00000473720 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
SMPD4-217ENST00000473720 LAS1LQ9Y4W2 734 aaKnown RBP15.71■□□□□ 0.11
SMPD4-217ENST00000473720 MAP3K15Q6ZN16 1313 aa15.7■□□□□ 0.1
SMPD4-217ENST00000473720 ZC3H4Q9UPT8 1303 aaKnown RBP15.7■□□□□ 0.1
SMPD4-217ENST00000473720 TAF1P21675 1872 aa15.7■□□□□ 0.1
SMPD4-217ENST00000473720 NPR1P16066 1061 aa15.7■□□□□ 0.1
SMPD4-217ENST00000473720 WDR43Q15061 677 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMPD4-217ENST00000473720 DPY19L2Q6NUT2 758 aa15.7■□□□□ 0.1
SMPD4-217ENST00000473720 ANXA1P04083 346 aa15.69■□□□□ 0.1
SMPD4-217ENST00000473720 VEGFAP15692 232 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-217ENST00000473720 LMOD3Q0VAK6 560 aa15.68■□□□□ 0.1
SMPD4-217ENST00000473720 OLFM4Q6UX06 510 aa15.68■□□□□ 0.1
SMPD4-217ENST00000473720 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 SCN4AP35499 1836 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 ERVV-1B6SEH8 477 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 FSTL1Q12841 308 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 CCDC93Q567U6 631 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 SOGA3Q5TF21 947 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
SMPD4-217ENST00000473720 AIMP1Q12904 312 aaKnown RBP15.66■□□□□ 0.1
SMPD4-217ENST00000473720 SMC1BQ8NDV3 1235 aa15.66■□□□□ 0.1
SMPD4-217ENST00000473720 UBN2Q6ZU65 1347 aa15.66■□□□□ 0.1
SMPD4-217ENST00000473720 LTBP3Q9NS15 1303 aa15.66■□□□□ 0.1
SMPD4-217ENST00000473720 RGL2O15211 777 aa15.65■□□□□ 0.1
SMPD4-217ENST00000473720 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-217ENST00000473720 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
SMPD4-217ENST00000473720 SUSD4Q5VX71 490 aa15.65■□□□□ 0.1
SMPD4-217ENST00000473720 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
SMPD4-217ENST00000473720 RUNDC1Q96C34 613 aa15.65■□□□□ 0.1
SMPD4-217ENST00000473720 ZNF277Q9NRM2 450 aaPredicted RBP15.65■□□□□ 0.1
SMPD4-217ENST00000473720 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
SMPD4-217ENST00000473720 ALDH1B1P30837 517 aa15.64■□□□□ 0.09
SMPD4-217ENST00000473720 KRT24Q2M2I5 525 aa15.64■□□□□ 0.09
SMPD4-217ENST00000473720 GIGYF2Q6Y7W6 1299 aaKnown RBP15.64■□□□□ 0.09
SMPD4-217ENST00000473720 ADAMTS8Q9UP79 889 aa15.64■□□□□ 0.09
SMPD4-217ENST00000473720 KLRG2A4D1S0 409 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-217ENST00000473720 POTECB2RU33 542 aa15.63■□□□□ 0.09
SMPD4-217ENST00000473720 FKBP4Q02790 459 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMPD4-217ENST00000473720 C7orf43Q8WVR3 580 aa15.63■□□□□ 0.09
SMPD4-217ENST00000473720 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
SMPD4-217ENST00000473720 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
SMPD4-217ENST00000473720 PDIA6Q15084 440 aa15.62■□□□□ 0.09
SMPD4-217ENST00000473720 PPP1R42Q7Z4L9 355 aa15.62■□□□□ 0.09
SMPD4-217ENST00000473720 ZNF34Q8IZ26 560 aa15.62■□□□□ 0.09
SMPD4-217ENST00000473720 DNAJC5GQ8N7S2 189 aa15.62■□□□□ 0.09
SMPD4-217ENST00000473720 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
SMPD4-217ENST00000473720 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
SMPD4-217ENST00000473720 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms