RNA–Protein interactions for RNA: ENST00000473140.1

AGAP3-210, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 4

Gene AGAP3, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-210ENST00000473140 DZIP3Q86Y13 1208 aaKnown RBP19.4■□□□□ 0.7
AGAP3-210ENST00000473140 L3MBTL3Q96JM7 780 aaPredicted RBP19.4■□□□□ 0.7
AGAP3-210ENST00000473140 ZNF652Q9Y2D9 606 aa19.4■□□□□ 0.7
AGAP3-210ENST00000473140 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
AGAP3-210ENST00000473140 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.7
AGAP3-210ENST00000473140 TMEM88BA6NKF7 163 aa19.39■□□□□ 0.69
AGAP3-210ENST00000473140 U2SURPO15042 1029 aaKnown RBP19.39■□□□□ 0.69
AGAP3-210ENST00000473140 CTCFP49711 727 aaPredicted RBP19.39■□□□□ 0.69
AGAP3-210ENST00000473140 NBPF5PQ86XG9 351 aaPredicted RBP19.39■□□□□ 0.69
AGAP3-210ENST00000473140 TAF1DQ9H5J8 278 aaPredicted RBP19.39■□□□□ 0.69
AGAP3-210ENST00000473140 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
AGAP3-210ENST00000473140 POTEIP0CG38 1075 aa19.38■□□□□ 0.69
AGAP3-210ENST00000473140 POTEJP0CG39 1038 aa19.38■□□□□ 0.69
AGAP3-210ENST00000473140 NPR1P16066 1061 aa19.38■□□□□ 0.69
AGAP3-210ENST00000473140 PASKQ96RG2 1323 aa19.38■□□□□ 0.69
AGAP3-210ENST00000473140 FOXN1O15353 648 aa19.37■□□□□ 0.69
AGAP3-210ENST00000473140 CC2D1BQ5T0F9 858 aaKnown RBP19.37■□□□□ 0.69
AGAP3-210ENST00000473140 TPTE2Q6XPS3 522 aa19.37■□□□□ 0.69
AGAP3-210ENST00000473140 RTKN2Q8IZC4 609 aa19.37■□□□□ 0.69
AGAP3-210ENST00000473140 C7orf43Q8WVR3 580 aa19.37■□□□□ 0.69
AGAP3-210ENST00000473140 RGL2O15211 777 aa19.36■□□□□ 0.69
AGAP3-210ENST00000473140 PER1O15534 1290 aaPredicted RBP19.36■□□□□ 0.69
AGAP3-210ENST00000473140 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
AGAP3-210ENST00000473140 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
AGAP3-210ENST00000473140 HACL1Q9UJ83 578 aa19.36■□□□□ 0.69
AGAP3-210ENST00000473140 CLEC11AQ9Y240 323 aa19.36■□□□□ 0.69
AGAP3-210ENST00000473140 SLX4Q8IY92 1834 aa19.35■□□□□ 0.69
AGAP3-210ENST00000473140 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
AGAP3-210ENST00000473140 SCN7AQ01118 1682 aa19.35■□□□□ 0.69
AGAP3-210ENST00000473140 SCN4AP35499 1836 aa19.35■□□□□ 0.69
AGAP3-210ENST00000473140 KLRG2A4D1S0 409 aaPredicted RBP19.34■□□□□ 0.69
AGAP3-210ENST00000473140 ITGBL1O95965 494 aaPredicted RBP19.34■□□□□ 0.69
AGAP3-210ENST00000473140 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
AGAP3-210ENST00000473140 VEGFBP49765 207 aa19.34■□□□□ 0.69
AGAP3-210ENST00000473140 KIF7Q2M1P5 1343 aa19.33■□□□□ 0.69
AGAP3-210ENST00000473140 SNRPA1P09661 255 aaKnown RBP19.33■□□□□ 0.68
AGAP3-210ENST00000473140 USP16Q9Y5T5 823 aa19.33■□□□□ 0.68
AGAP3-210ENST00000473140 COL11A2P13942 1736 aaPredicted RBP19.33■□□□□ 0.68
AGAP3-210ENST00000473140 CEMIPQ8WUJ3 1361 aa19.32■□□□□ 0.68
AGAP3-210ENST00000473140 EPHX2P34913 555 aa19.32■□□□□ 0.68
AGAP3-210ENST00000473140 DEFB115Q30KQ5 88 aa19.32■□□□□ 0.68
AGAP3-210ENST00000473140 WBP1LQ9NX94 342 aa19.32■□□□□ 0.68
AGAP3-210ENST00000473140 RTF1Q92541 710 aaKnown RBP19.31■□□□□ 0.68
AGAP3-210ENST00000473140 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
AGAP3-210ENST00000473140 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
AGAP3-210ENST00000473140 KCNQ3O43525 872 aa19.3■□□□□ 0.68
AGAP3-210ENST00000473140 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
AGAP3-210ENST00000473140 MAP2K1Q02750 393 aaPredicted RBP19.3■□□□□ 0.68
AGAP3-210ENST00000473140 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
AGAP3-210ENST00000473140 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
AGAP3-210ENST00000473140 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
AGAP3-210ENST00000473140 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
AGAP3-210ENST00000473140 ARFGEF2Q9Y6D5 1785 aa19.29■□□□□ 0.68
AGAP3-210ENST00000473140 RASSF10A6NK89 507 aa19.29■□□□□ 0.68
AGAP3-210ENST00000473140 IARSP41252 1262 aaKnown RBP19.29■□□□□ 0.68
AGAP3-210ENST00000473140 GPC2Q8N158 579 aa19.29■□□□□ 0.68
AGAP3-210ENST00000473140 SYNE4Q8N205 404 aa19.29■□□□□ 0.68
AGAP3-210ENST00000473140 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
AGAP3-210ENST00000473140 FZD9O00144 591 aa19.28■□□□□ 0.68
AGAP3-210ENST00000473140 LBX1P52954 281 aa19.28■□□□□ 0.68
AGAP3-210ENST00000473140 CC2D2BQ6DHV5 1058 aa19.28■□□□□ 0.68
AGAP3-210ENST00000473140 ZNF541Q9H0D2 1346 aa19.27■□□□□ 0.68
AGAP3-210ENST00000473140 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
AGAP3-210ENST00000473140 CACNA1SQ13698 1873 aa19.27■□□□□ 0.68
AGAP3-210ENST00000473140 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
AGAP3-210ENST00000473140 PIP4K2AP48426 406 aaPredicted RBP19.27■□□□□ 0.68
AGAP3-210ENST00000473140 GRIPAP1Q4V328 841 aa19.27■□□□□ 0.68
AGAP3-210ENST00000473140 CCER1Q8TC90 406 aaPredicted RBP19.27■□□□□ 0.68
AGAP3-210ENST00000473140 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.68
AGAP3-210ENST00000473140 EIF6P56537 245 aaKnown RBP19.26■□□□□ 0.67
AGAP3-210ENST00000473140 PSMD1Q99460 953 aa19.26■□□□□ 0.67
AGAP3-210ENST00000473140 NYXQ9GZU5 481 aa19.26■□□□□ 0.67
AGAP3-210ENST00000473140 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
AGAP3-210ENST00000473140 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
AGAP3-210ENST00000473140 LMOD1P29536 600 aaPredicted RBP19.25■□□□□ 0.67
AGAP3-210ENST00000473140 MAP1SQ66K74 1059 aaPredicted RBP19.25■□□□□ 0.67
AGAP3-210ENST00000473140 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
AGAP3-210ENST00000473140 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
AGAP3-210ENST00000473140 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
AGAP3-210ENST00000473140 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
AGAP3-210ENST00000473140 HTATSF1O43719 755 aaKnown RBP19.24■□□□□ 0.67
AGAP3-210ENST00000473140 CNGB1Q14028 1251 aaPredicted RBP19.24■□□□□ 0.67
AGAP3-210ENST00000473140 RSPH6AQ9H0K4 717 aa19.24■□□□□ 0.67
AGAP3-210ENST00000473140 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
AGAP3-210ENST00000473140 ECE1P42892 770 aa19.23■□□□□ 0.67
AGAP3-210ENST00000473140 BEGAINQ9BUH8 593 aa19.23■□□□□ 0.67
AGAP3-210ENST00000473140 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
AGAP3-210ENST00000473140 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
AGAP3-210ENST00000473140 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
AGAP3-210ENST00000473140 OLFM4Q6UX06 510 aa19.22■□□□□ 0.67
AGAP3-210ENST00000473140 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
AGAP3-210ENST00000473140 DDX21Q9NR30 783 aaKnown RBP eCLIP19.22■□□□□ 0.67
AGAP3-210ENST00000473140 GJA3Q9Y6H8 435 aa19.22■□□□□ 0.67
AGAP3-210ENST00000473140 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
AGAP3-210ENST00000473140 TAF7Q15545 349 aaPredicted RBP19.21■□□□□ 0.67
AGAP3-210ENST00000473140 MCM10Q7L590 875 aa19.21■□□□□ 0.67
AGAP3-210ENST00000473140 U2AF1L5P0DN76 240 aaPredicted RBP19.2■□□□□ 0.66
AGAP3-210ENST00000473140 U2AF1Q01081 240 aaKnown RBP eCLIP19.2■□□□□ 0.66
AGAP3-210ENST00000473140 HLFQ16534 295 aa19.2■□□□□ 0.66
AGAP3-210ENST00000473140 CRY2Q49AN0 593 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms