RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 TOPAZ1Q8N9V7 1692 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 USP47Q96K76 1375 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
ITGB1-209ENST00000472147 KAT6BQ8WYB5 2073 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 TOMM70O94826 608 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 NUDT18Q6ZVK8 323 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
ITGB1-209ENST00000472147 COG3Q96JB2 828 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 SBNO2Q9Y2G9 1366 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 ATP10DQ9P241 1426 aa8.19□□□□□ -1.1
ITGB1-209ENST00000472147 HOXC9P31274 260 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 PTPN5P54829 565 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 NBPF6Q5VWK0 638 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 Q6ZNB5 142 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 RAPGEF4Q8WZA2 1011 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 NBPF4Q96M43 638 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 ROCK2O75116 1388 aaKnown RBP8.18□□□□□ -1.1
ITGB1-209ENST00000472147 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
ITGB1-209ENST00000472147 NBPF26B4DH59 902 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 SMAPO00193 183 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 TATP17735 454 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-209ENST00000472147 TGFB2P61812 414 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 MPRIPQ6WCQ1 1025 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
ITGB1-209ENST00000472147 ZNF526Q8TF50 670 aaPredicted RBP8.17□□□□□ -1.1
ITGB1-209ENST00000472147 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 NFAT5O94916 1531 aa8.17□□□□□ -1.1
ITGB1-209ENST00000472147 NEUROD1Q13562 356 aa8.16□□□□□ -1.1
ITGB1-209ENST00000472147 AMHR2Q16671 573 aa8.16□□□□□ -1.1
ITGB1-209ENST00000472147 MAP3K19Q56UN5 1328 aa8.16□□□□□ -1.1
ITGB1-209ENST00000472147 NLGN1Q8N2Q7 840 aa8.16□□□□□ -1.1
ITGB1-209ENST00000472147 SIN3AQ96ST3 1273 aa8.16□□□□□ -1.1
ITGB1-209ENST00000472147 EDC4Q6P2E9 1401 aaKnown RBP8.15□□□□□ -1.1
ITGB1-209ENST00000472147 ADCY9O60503 1353 aa8.15□□□□□ -1.1
ITGB1-209ENST00000472147 NSD2O96028 1365 aa8.15□□□□□ -1.1
ITGB1-209ENST00000472147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.15□□□□□ -1.1
ITGB1-209ENST00000472147 SSFA2P28290 1259 aa8.15□□□□□ -1.1
ITGB1-209ENST00000472147 PDE4DQ08499 809 aa8.15□□□□□ -1.1
ITGB1-209ENST00000472147 TMUB1Q9BVT8 246 aa8.15□□□□□ -1.1
ITGB1-209ENST00000472147 PIK3C2AO00443 1686 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 NHSQ6T4R5 1651 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 PAPPAQ13219 1627 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 IGSF1Q8N6C5 1336 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 PIGBQ92521 554 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 SEPT9Q9UHD8 586 aaPredicted RBP8.14□□□□□ -1.11
ITGB1-209ENST00000472147 AKAP12Q02952 1782 aa8.14□□□□□ -1.11
ITGB1-209ENST00000472147 PCDH11XQ9BZA7 1347 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 PCDH11YQ9BZA8 1340 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 FYB1O15117 783 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 FBLN1P23142 703 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 SIK1P57059 783 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 TMF1P82094 1093 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 FSTL1Q12841 308 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 TRAPPC3LQ5T215 181 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 LAPTM4BQ86VI4 370 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 NLRP7Q8WX94 980 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
ITGB1-209ENST00000472147 SPG7Q9UQ90 795 aa8.13□□□□□ -1.11
ITGB1-209ENST00000472147 CYP27B1O15528 508 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 BRPF1P55201 1214 aaPredicted RBP8.12□□□□□ -1.11
ITGB1-209ENST00000472147 JMYQ8N9B5 988 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 NBPF3Q9H094 633 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 CD163L1Q9NR16 1453 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 COL24A1Q17RW2 1714 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 SHANK3Q9BYB0 1731 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 NSD3Q9BZ95 1437 aa8.12□□□□□ -1.11
ITGB1-209ENST00000472147 PALLDQ8WX93 1383 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 BTAF1O14981 1849 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 A0A0G2JLW4 131 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 DNAJB2P25686 324 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 HSP90AB2PQ58FF8 381 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
ITGB1-209ENST00000472147 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-209ENST00000472147 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 RGPD5Q99666 1765 aa8.11□□□□□ -1.11
ITGB1-209ENST00000472147 A0A1W2PP64 1363 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 MMP10P09238 476 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-209ENST00000472147 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
ITGB1-209ENST00000472147 AMIGO3Q86WK7 504 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 MRPL50Q8N5N7 158 aaKnown RBP8.1□□□□□ -1.11
ITGB1-209ENST00000472147 TESK2Q96S53 571 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 TMEM134Q9H6X4 195 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 BCS1LQ9Y276 419 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
ITGB1-209ENST00000472147 INSRP06213 1382 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 KIF24Q5T7B8 1368 aa8.1□□□□□ -1.11
ITGB1-209ENST00000472147 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
ITGB1-209ENST00000472147 QRICH2Q9H0J4 1663 aa8.09□□□□□ -1.11
ITGB1-209ENST00000472147 ST20-MTHFSA0A0A6YYL1 179 aa8.09□□□□□ -1.11
ITGB1-209ENST00000472147 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-209ENST00000472147 IFNL2Q8IZJ0 200 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms