RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 RDH13Q8NBN7 331 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 SMC1BQ8NDV3 1235 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 PHOX2BQ99453 314 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 HCSTQ9UBK5 93 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 HPS5Q9UPZ3 1129 aa6.59□□□□□ -1.35
LMNB1-205ENST00000472034 USP6P35125 1406 aa6.59□□□□□ -1.36
LMNB1-205ENST00000472034 BRD4O60885 1362 aaPredicted RBP6.58□□□□□ -1.36
LMNB1-205ENST00000472034 CPDO75976 1380 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 CTCFP49711 727 aaPredicted RBP6.58□□□□□ -1.36
LMNB1-205ENST00000472034 BCAMP50895 628 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 PTPN5P54829 565 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 KMT5BQ4FZB7 885 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 TOM1L2Q6ZVM7 507 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 NGDNQ8NEJ9 315 aaKnown RBP6.58□□□□□ -1.36
LMNB1-205ENST00000472034 PRAM1Q96QH2 718 aa6.58□□□□□ -1.36
LMNB1-205ENST00000472034 MMRN1Q13201 1228 aa6.57□□□□□ -1.36
LMNB1-205ENST00000472034 NEUROD2Q15784 382 aa6.57□□□□□ -1.36
LMNB1-205ENST00000472034 C9orf131Q5VYM1 1079 aa6.57□□□□□ -1.36
LMNB1-205ENST00000472034 NLRP7Q8WX94 980 aa6.57□□□□□ -1.36
LMNB1-205ENST00000472034 KAT6BQ8WYB5 2073 aa6.56□□□□□ -1.36
LMNB1-205ENST00000472034 HSPA8P11142 646 aaKnown RBP6.56□□□□□ -1.36
LMNB1-205ENST00000472034 SSTR3P32745 418 aaPredicted RBP6.56□□□□□ -1.36
LMNB1-205ENST00000472034 FAM50AQ14320 339 aaKnown RBP6.56□□□□□ -1.36
LMNB1-205ENST00000472034 GIGYF2Q6Y7W6 1299 aaKnown RBP6.56□□□□□ -1.36
LMNB1-205ENST00000472034 ARHGAP27Q6ZUM4 889 aa6.56□□□□□ -1.36
LMNB1-205ENST00000472034 PARP9Q8IXQ6 854 aa6.55□□□□□ -1.36
LMNB1-205ENST00000472034 FAM217BQ9NTX9 383 aaPredicted RBP6.55□□□□□ -1.36
LMNB1-205ENST00000472034 C10orf71Q711Q0 1435 aa6.55□□□□□ -1.36
LMNB1-205ENST00000472034 PKD1L3Q7Z443 1732 aa6.55□□□□□ -1.36
LMNB1-205ENST00000472034 ANKRD30BQ9BXX2 1392 aa6.55□□□□□ -1.36
LMNB1-205ENST00000472034 PXDNLA1KZ92 1463 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 RPGRIP1LQ68CZ1 1315 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 EXOC5O00471 708 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 GCP02774 474 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 DIXDC1Q155Q3 683 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 GRIPAP1Q4V328 841 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 SLC27A3Q5K4L6 730 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 AMIGO3Q86WK7 504 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 AIDAQ96BJ3 306 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 WBP1LQ9NX94 342 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 BCS1LQ9Y276 419 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 QRICH2Q9H0J4 1663 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
LMNB1-205ENST00000472034 A0A0C4DFX4 3053 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 KIAA1551Q9HCM1 1747 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 TNRC6CQ9HCJ0 1690 aaKnown RBP6.53□□□□□ -1.36
LMNB1-205ENST00000472034 CFHP08603 1231 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 SIRT1Q96EB6 747 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 COL18A1P39060 1754 aa6.53□□□□□ -1.36
LMNB1-205ENST00000472034 N4BP2Q86UW6 1770 aaPredicted RBP6.53□□□□□ -1.36
LMNB1-205ENST00000472034 WDR17Q8IZU2 1322 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 KDM2BQ8NHM5 1336 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 PIK3C2AO00443 1686 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 A0A0G2JLW4 131 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 CD46P15529 392 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 VEGFBP49765 207 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 ABTB2Q8N961 1025 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 KDM4CQ9H3R0 1056 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 CNTNAP1P78357 1384 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 PLEKHG2Q9H7P9 1386 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 RGPD5Q99666 1765 aa6.52□□□□□ -1.37
LMNB1-205ENST00000472034 PIK3C2GO75747 1445 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 SLC10A3P09131 477 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 GCGRP47871 477 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 USP46P62068 366 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 RGL3Q3MIN7 710 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 PRPF38BQ5VTL8 546 aaKnown RBP6.51□□□□□ -1.37
LMNB1-205ENST00000472034 BEGAINQ9BUH8 593 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 REPIN1Q9BWE0 567 aaKnown RBP6.51□□□□□ -1.37
LMNB1-205ENST00000472034 CDCA7Q9BWT1 371 aaPredicted RBP6.51□□□□□ -1.37
LMNB1-205ENST00000472034 CARD10Q9BWT7 1032 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 RNF181Q9P0P0 153 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 POGKQ9P215 609 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 SZT2Q5T011 3432 aa6.51□□□□□ -1.37
LMNB1-205ENST00000472034 ABCC6O95255 1503 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 LY75O60449 1722 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 ACTN4O43707 911 aaKnown RBP6.5□□□□□ -1.37
LMNB1-205ENST00000472034 KDM4AO75164 1064 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 CFAP70Q5T0N1 1121 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 HOMEZQ8IX15 550 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 VIRMAQ69YN4 1812 aaKnown RBP6.5□□□□□ -1.37
LMNB1-205ENST00000472034 PPIP5K1Q6PFW1 1433 aa6.5□□□□□ -1.37
LMNB1-205ENST00000472034 USP54Q70EL1 1684 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 NSD2O96028 1365 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 WASLO00401 505 aaPredicted RBP6.49□□□□□ -1.37
LMNB1-205ENST00000472034 DLL1O00548 723 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 BRPF1P55201 1214 aaPredicted RBP6.49□□□□□ -1.37
LMNB1-205ENST00000472034 SOX10P56693 466 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 MCOLN1Q9GZU1 580 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 CCNL1Q9UK58 526 aaPredicted RBP6.49□□□□□ -1.37
LMNB1-205ENST00000472034 PCDHB3Q9Y5E6 796 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 ACEP12821 1306 aa6.49□□□□□ -1.37
LMNB1-205ENST00000472034 TOGARAM1Q9Y4F4 1720 aa6.48□□□□□ -1.37
LMNB1-205ENST00000472034 POTECB2RU33 542 aa6.48□□□□□ -1.37
LMNB1-205ENST00000472034 CSB-PGBD3P0DP91 1061 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms