RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 CEMIPQ8WUJ3 1361 aa26.75■■□□□ 1.87
CCDC78-208ENST00000471861 GNAT3A8MTJ3 354 aa26.75■■□□□ 1.87
CCDC78-208ENST00000471861 FOXN1O15353 648 aa26.75■■□□□ 1.87
CCDC78-208ENST00000471861 KCNQ3O43525 872 aa26.75■■□□□ 1.87
CCDC78-208ENST00000471861 SETDB2Q96T68 719 aa26.75■■□□□ 1.87
CCDC78-208ENST00000471861 CC2D1BQ5T0F9 858 aaKnown RBP26.74■■□□□ 1.87
CCDC78-208ENST00000471861 C7orf43Q8WVR3 580 aa26.74■■□□□ 1.87
CCDC78-208ENST00000471861 L3MBTL3Q96JM7 780 aaPredicted RBP26.74■■□□□ 1.87
CCDC78-208ENST00000471861 ST5P78524 1137 aa26.73■■□□□ 1.87
CCDC78-208ENST00000471861 MASTLQ96GX5 879 aa26.73■■□□□ 1.87
CCDC78-208ENST00000471861 FMNL2Q96PY5 1086 aa26.73■■□□□ 1.87
CCDC78-208ENST00000471861 SCN4AP35499 1836 aa26.72■■□□□ 1.87
CCDC78-208ENST00000471861 PIP4K2AP48426 406 aaPredicted RBP26.72■■□□□ 1.87
CCDC78-208ENST00000471861 GAS2L2Q8NHY3 880 aa26.72■■□□□ 1.87
CCDC78-208ENST00000471861 TAF1DQ9H5J8 278 aaPredicted RBP26.72■■□□□ 1.87
CCDC78-208ENST00000471861 ADAMTSL1Q8N6G6 1762 aa26.71■■□□□ 1.87
CCDC78-208ENST00000471861 SOGA3Q5TF21 947 aa26.71■■□□□ 1.87
CCDC78-208ENST00000471861 LDHDQ86WU2 507 aa26.71■■□□□ 1.87
CCDC78-208ENST00000471861 DZIP3Q86Y13 1208 aaKnown RBP26.71■■□□□ 1.87
CCDC78-208ENST00000471861 ZNF541Q9H0D2 1346 aa26.7■■□□□ 1.87
CCDC78-208ENST00000471861 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
CCDC78-208ENST00000471861 IQCA1LA6NCM1 817 aa26.69■■□□□ 1.86
CCDC78-208ENST00000471861 U2SURPO15042 1029 aaKnown RBP26.69■■□□□ 1.86
CCDC78-208ENST00000471861 NPHP1O15259 732 aa26.69■■□□□ 1.86
CCDC78-208ENST00000471861 USP16Q9Y5T5 823 aa26.69■■□□□ 1.86
CCDC78-208ENST00000471861 ITGBL1O95965 494 aaPredicted RBP26.68■■□□□ 1.86
CCDC78-208ENST00000471861 OLFM4Q6UX06 510 aa26.68■■□□□ 1.86
CCDC78-208ENST00000471861 VEGFBP49765 207 aa26.67■■□□□ 1.86
CCDC78-208ENST00000471861 CCDC93Q567U6 631 aa26.67■■□□□ 1.86
CCDC78-208ENST00000471861 PRDM10Q9NQV6 1147 aa26.66■■□□□ 1.86
CCDC78-208ENST00000471861 KLRG2A4D1S0 409 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-208ENST00000471861 BTBD11A6QL63 1104 aa26.65■■□□□ 1.86
CCDC78-208ENST00000471861 NPM2Q86SE8 214 aaKnown RBP26.65■■□□□ 1.86
CCDC78-208ENST00000471861 NBPF5PQ86XG9 351 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-208ENST00000471861 PHACTR3Q96KR7 559 aa26.65■■□□□ 1.86
CCDC78-208ENST00000471861 ZNF277Q9NRM2 450 aaPredicted RBP26.65■■□□□ 1.86
CCDC78-208ENST00000471861 NPR1P16066 1061 aa26.64■■□□□ 1.86
CCDC78-208ENST00000471861 FKBP4Q02790 459 aaKnown RBP eCLIP26.64■■□□□ 1.86
CCDC78-208ENST00000471861 TMEM88BA6NKF7 163 aa26.63■■□□□ 1.85
CCDC78-208ENST00000471861 CLEC4GQ6UXB4 293 aa26.63■■□□□ 1.85
CCDC78-208ENST00000471861 SNED1Q8TER0 1413 aa26.63■■□□□ 1.85
CCDC78-208ENST00000471861 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
CCDC78-208ENST00000471861 EAPPQ56P03 285 aaPredicted RBP26.62■■□□□ 1.85
CCDC78-208ENST00000471861 RSPH6AQ9H0K4 717 aa26.61■■□□□ 1.85
CCDC78-208ENST00000471861 WBP1LQ9NX94 342 aa26.61■■□□□ 1.85
CCDC78-208ENST00000471861 HACL1Q9UJ83 578 aa26.61■■□□□ 1.85
CCDC78-208ENST00000471861 PRKAR2BP31323 418 aa26.6■■□□□ 1.85
CCDC78-208ENST00000471861 CTCFP49711 727 aaPredicted RBP26.6■■□□□ 1.85
CCDC78-208ENST00000471861 RNF123Q5XPI4 1314 aa26.6■■□□□ 1.85
CCDC78-208ENST00000471861 NBPF26B4DH59 902 aa26.59■■□□□ 1.85
CCDC78-208ENST00000471861 EPHX2P34913 555 aa26.59■■□□□ 1.85
CCDC78-208ENST00000471861 NBPF10Q6P3W6 841 aaKnown RBP26.59■■□□□ 1.85
CCDC78-208ENST00000471861 NBPF15Q8N660 670 aa26.59■■□□□ 1.85
CCDC78-208ENST00000471861 COL4A5P29400 1685 aa26.59■■□□□ 1.85
CCDC78-208ENST00000471861 CNGB1Q14028 1251 aaPredicted RBP26.58■■□□□ 1.85
CCDC78-208ENST00000471861 ZNF652Q9Y2D9 606 aa26.58■■□□□ 1.85
CCDC78-208ENST00000471861 FZD9O00144 591 aa26.57■■□□□ 1.84
CCDC78-208ENST00000471861 MAP1SQ66K74 1059 aaPredicted RBP26.57■■□□□ 1.84
CCDC78-208ENST00000471861 AIDAQ96BJ3 306 aa26.57■■□□□ 1.84
CCDC78-208ENST00000471861 NIP7Q9Y221 180 aaKnown RBP eCLIP26.57■■□□□ 1.84
CCDC78-208ENST00000471861 RASSF10A6NK89 507 aa26.56■■□□□ 1.84
CCDC78-208ENST00000471861 SNRPA1P09661 255 aaKnown RBP26.56■■□□□ 1.84
CCDC78-208ENST00000471861 IARSP41252 1262 aaKnown RBP26.56■■□□□ 1.84
CCDC78-208ENST00000471861 LBX1P52954 281 aa26.56■■□□□ 1.84
CCDC78-208ENST00000471861 LTBP1Q14766 1721 aa26.56■■□□□ 1.84
CCDC78-208ENST00000471861 FAM177BA6PVY3 158 aa26.55■■□□□ 1.84
CCDC78-208ENST00000471861 RTKN2Q8IZC4 609 aa26.55■■□□□ 1.84
CCDC78-208ENST00000471861 CLEC11AQ9Y240 323 aa26.55■■□□□ 1.84
CCDC78-208ENST00000471861 ABCC12Q96J65 1359 aa26.55■■□□□ 1.84
CCDC78-208ENST00000471861 RGL2O15211 777 aa26.54■■□□□ 1.84
CCDC78-208ENST00000471861 HLFQ16534 295 aa26.54■■□□□ 1.84
CCDC78-208ENST00000471861 TPTE2Q6XPS3 522 aa26.54■■□□□ 1.84
CCDC78-208ENST00000471861 MCM10Q7L590 875 aa26.54■■□□□ 1.84
CCDC78-208ENST00000471861 CNTROBQ8N137 903 aa26.54■■□□□ 1.84
CCDC78-208ENST00000471861 HSPA8P11142 646 aaKnown RBP26.53■■□□□ 1.84
CCDC78-208ENST00000471861 SYNE4Q8N205 404 aa26.53■■□□□ 1.84
CCDC78-208ENST00000471861 THSD7BQ9C0I4 1608 aa26.53■■□□□ 1.84
CCDC78-208ENST00000471861 PNMA8AQ86V59 439 aaPredicted RBP26.52■■□□□ 1.84
CCDC78-208ENST00000471861 LAMB4A4D0S4 1761 aa26.51■■□□□ 1.83
CCDC78-208ENST00000471861 DEFB115Q30KQ5 88 aa26.51■■□□□ 1.83
CCDC78-208ENST00000471861 SLC51AQ86UW1 340 aa26.51■■□□□ 1.83
CCDC78-208ENST00000471861 GPC2Q8N158 579 aa26.51■■□□□ 1.83
CCDC78-208ENST00000471861 DCTN1Q14203 1278 aa26.5■■□□□ 1.83
CCDC78-208ENST00000471861 WDR33Q9C0J8 1336 aaKnown RBP26.49■■□□□ 1.83
CCDC78-208ENST00000471861 CRY2Q49AN0 593 aa26.49■■□□□ 1.83
CCDC78-208ENST00000471861 PSMD1Q99460 953 aa26.49■■□□□ 1.83
CCDC78-208ENST00000471861 ALDH1B1P30837 517 aa26.48■■□□□ 1.83
CCDC78-208ENST00000471861 FMR1Q06787 632 aaKnown RBP eCLIP26.48■■□□□ 1.83
CCDC78-208ENST00000471861 CCER1Q8TC90 406 aaPredicted RBP26.47■■□□□ 1.83
CCDC78-208ENST00000471861 DDX21Q9NR30 783 aaKnown RBP eCLIP26.47■■□□□ 1.83
CCDC78-208ENST00000471861 NUTM1Q86Y26 1132 aa26.46■■□□□ 1.83
CCDC78-208ENST00000471861 ABHD8Q96I13 439 aa26.46■■□□□ 1.83
CCDC78-208ENST00000471861 ABT1Q9ULW3 272 aaKnown RBP26.46■■□□□ 1.83
CCDC78-208ENST00000471861 SCNN1DP51172 638 aa26.45■■□□□ 1.82
CCDC78-208ENST00000471861 RTF1Q92541 710 aaKnown RBP26.45■■□□□ 1.82
CCDC78-208ENST00000471861 RIC1Q4ADV7 1423 aa26.43■■□□□ 1.82
CCDC78-208ENST00000471861 MAP2K1Q02750 393 aaPredicted RBP26.43■■□□□ 1.82
CCDC78-208ENST00000471861 JDP2Q8WYK2 163 aa26.43■■□□□ 1.82
CCDC78-208ENST00000471861 CFAP53Q96M91 514 aa26.43■■□□□ 1.82
CCDC78-208ENST00000471861 GJA3Q9Y6H8 435 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms