RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 UCN2Q96RP3 112 aa8.5□□□□□ -1.05
RBM39-228ENST00000471635 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
RBM39-228ENST00000471635 USP17L3A6NCW0 530 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 USP17L4A6NCW7 530 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 BACH1O14867 736 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 ATXN7O15265 892 aaPredicted RBP8.49□□□□□ -1.05
RBM39-228ENST00000471635 MTFR1Q15390 333 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 USP17L1Q7RTZ2 530 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 CABP1Q9NZU7 370 aa8.49□□□□□ -1.05
RBM39-228ENST00000471635 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
RBM39-228ENST00000471635 ATP4AP20648 1035 aa8.48□□□□□ -1.05
RBM39-228ENST00000471635 LCE1DQ5T752 114 aa8.48□□□□□ -1.05
RBM39-228ENST00000471635 IQSEC3Q9UPP2 1182 aaPredicted RBP8.48□□□□□ -1.05
RBM39-228ENST00000471635 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 ATP9BO43861 1147 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
RBM39-228ENST00000471635 CD33P20138 364 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 ALAS2P22557 587 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 ZNF295-AS1Q8N0V1 137 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 GLMNQ92990 594 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 PARP3Q9Y6F1 533 aa8.47□□□□□ -1.05
RBM39-228ENST00000471635 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
RBM39-228ENST00000471635 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
RBM39-228ENST00000471635 PAX4O43316 350 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.06
RBM39-228ENST00000471635 TXKP42681 527 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
RBM39-228ENST00000471635 TNP2Q05952 138 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
RBM39-228ENST00000471635 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 KIAA1024Q9UPX6 916 aa8.46□□□□□ -1.06
RBM39-228ENST00000471635 CLDN10P78369 228 aa8.45□□□□□ -1.06
RBM39-228ENST00000471635 TRIM28Q13263 835 aaKnown RBP8.45□□□□□ -1.06
RBM39-228ENST00000471635 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
RBM39-228ENST00000471635 TBCELQ5QJ74 424 aa8.45□□□□□ -1.06
RBM39-228ENST00000471635 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
RBM39-228ENST00000471635 PRR12Q9ULL5 1215 aa8.45□□□□□ -1.06
RBM39-228ENST00000471635 ZBTB7BO15156 539 aaPredicted RBP8.44□□□□□ -1.06
RBM39-228ENST00000471635 TATP17735 454 aaPredicted RBP8.44□□□□□ -1.06
RBM39-228ENST00000471635 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
RBM39-228ENST00000471635 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
RBM39-228ENST00000471635 TNS4Q8IZW8 715 aa8.44□□□□□ -1.06
RBM39-228ENST00000471635 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
RBM39-228ENST00000471635 SCHIP1Q9P0W5 487 aaPredicted RBP8.44□□□□□ -1.06
RBM39-228ENST00000471635 MKRN1Q9UHC7 482 aaKnown RBP8.44□□□□□ -1.06
RBM39-228ENST00000471635 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 SLC9A9Q8IVB4 645 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 ZDHHC3Q9NYG2 299 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 HCN2Q9UL51 889 aa8.43□□□□□ -1.06
RBM39-228ENST00000471635 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
RBM39-228ENST00000471635 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
RBM39-228ENST00000471635 ELNP15502 786 aa8.42□□□□□ -1.06
RBM39-228ENST00000471635 EPHA4P54764 986 aa8.42□□□□□ -1.06
RBM39-228ENST00000471635 BICDL1Q6ZP65 573 aa8.42□□□□□ -1.06
RBM39-228ENST00000471635 ZDHHC1Q8WTX9 485 aa8.42□□□□□ -1.06
RBM39-228ENST00000471635 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
RBM39-228ENST00000471635 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
RBM39-228ENST00000471635 C9orf172C9J069 976 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 TXLNAP40222 546 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 L3MBTL2Q969R5 705 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
RBM39-228ENST00000471635 ZIC5Q96T25 663 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 ZNF232Q9UNY5 417 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 GJA3Q9Y6H8 435 aa8.41□□□□□ -1.06
RBM39-228ENST00000471635 COL17A1Q9UMD9 1497 aaPredicted RBP8.4□□□□□ -1.06
RBM39-228ENST00000471635 A6NJR5 290 aa8.4□□□□□ -1.06
RBM39-228ENST00000471635 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
RBM39-228ENST00000471635 MDFIQ99750 246 aa8.4□□□□□ -1.06
RBM39-228ENST00000471635 PALM3A6NDB9 673 aaPredicted RBP8.39□□□□□ -1.07
RBM39-228ENST00000471635 M0R082 166 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 NOS2P35228 1153 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
RBM39-228ENST00000471635 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 TEAD4Q15561 434 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 GRIK4Q16099 956 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 SH3PXD2AQ5TCZ1 1133 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 LARGE2Q8N3Y3 721 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 FMNL2Q96PY5 1086 aa8.39□□□□□ -1.07
RBM39-228ENST00000471635 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
RBM39-228ENST00000471635 MAFBQ9Y5Q3 323 aaPredicted RBP8.39□□□□□ -1.07
RBM39-228ENST00000471635 SFI1A8K8P3 1242 aa8.38□□□□□ -1.07
RBM39-228ENST00000471635 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
RBM39-228ENST00000471635 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
RBM39-228ENST00000471635 MARK1Q9P0L2 795 aa8.38□□□□□ -1.07
RBM39-228ENST00000471635 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
RBM39-228ENST00000471635 SERTM1A2A2V5 107 aa8.37□□□□□ -1.07
RBM39-228ENST00000471635 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
RBM39-228ENST00000471635 RASA1P20936 1047 aa8.37□□□□□ -1.07
RBM39-228ENST00000471635 NRG1Q02297 640 aaPredicted RBP8.37□□□□□ -1.07
RBM39-228ENST00000471635 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms