RNA–Protein interactions for RNA: ENST00000471474.5

SEMA3A-206, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 688 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-206ENST00000471474 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 CFHR5Q9BXR6 569 aa9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
SEMA3A-206ENST00000471474 DCDC2BA2VCK2 349 aa9.32□□□□□ -0.92
SEMA3A-206ENST00000471474 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
SEMA3A-206ENST00000471474 FAM69CQ0P6D2 419 aa9.32□□□□□ -0.92
SEMA3A-206ENST00000471474 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
SEMA3A-206ENST00000471474 ZNF295-AS1Q8N0V1 137 aa9.32□□□□□ -0.92
SEMA3A-206ENST00000471474 BMP4P12644 408 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 DGKZQ13574 1117 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 RETREG2Q8NC44 543 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 ABHD17AQ96GS6 310 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 SUSD3Q96L08 255 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
SEMA3A-206ENST00000471474 EPB42P16452 691 aa9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 INSM1Q01101 510 aaPredicted RBP9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 NEUROD1Q13562 356 aa9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 C16orf46Q6P387 395 aa9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 HSH2DQ96JZ2 352 aa9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
SEMA3A-206ENST00000471474 FGFR3P22607 806 aa9.29□□□□□ -0.92
SEMA3A-206ENST00000471474 GPR161Q8N6U8 529 aaKnown RBP9.29□□□□□ -0.92
SEMA3A-206ENST00000471474 TMEM88BA6NKF7 163 aa9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 BNIP3LO60238 219 aa9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 BRD2P25440 801 aaKnown RBP9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 OCLNQ16625 522 aa9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 COL26A1Q96A83 441 aa9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
SEMA3A-206ENST00000471474 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 MAPTP10636 758 aaKnown RBP9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 MAP2K3P46734 347 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 MAP3K10Q02779 954 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 AAMPQ13685 434 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 TTC16Q8NEE8 873 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 IFT43Q96FT9 208 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 MARK1Q9P0L2 795 aa9.27□□□□□ -0.93
SEMA3A-206ENST00000471474 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 SAMD5Q5TGI4 173 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 ZNF280CQ8ND82 737 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 QTRT2Q9H974 415 aaKnown RBP9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 FAM13BQ9NYF5 915 aa9.26□□□□□ -0.93
SEMA3A-206ENST00000471474 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 TGFBR3LH3BV60 316 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 ABL1P00519 1130 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 SRSF11Q05519 484 aaKnown RBP9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 LAMC2Q13753 1193 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 BTLAQ7Z6A9 289 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 MYO19Q96H55 970 aa9.25□□□□□ -0.93
SEMA3A-206ENST00000471474 IGF1RP08069 1367 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 CD33P20138 364 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 SSFA2P28290 1259 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 TNP2Q05952 138 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 ENAMQ9NRM1 1142 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
SEMA3A-206ENST00000471474 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
SEMA3A-206ENST00000471474 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
SEMA3A-206ENST00000471474 RNFT1Q5M7Z0 435 aa9.23□□□□□ -0.93
SEMA3A-206ENST00000471474 COX20Q5RI15 118 aa9.23□□□□□ -0.93
SEMA3A-206ENST00000471474 ABTB2Q8N961 1025 aa9.23□□□□□ -0.93
SEMA3A-206ENST00000471474 WIPF1O43516 503 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 MICAL2O94851 1124 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 IDH3AP50213 366 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 ARSDP51689 593 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 IER5Q5VY09 327 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 SVOPQ8N4V2 548 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 ZSCAN1Q8NBB4 408 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 STIM2Q9P246 746 aa9.22□□□□□ -0.93
SEMA3A-206ENST00000471474 THBS1P07996 1170 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 PCSK2P16519 638 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 CTBSQ01459 385 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 GAS6Q14393 721 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 TREML1Q86YW5 311 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 SEPT3Q9UH03 358 aa9.21□□□□□ -0.94
SEMA3A-206ENST00000471474 CMTR1Q8N1G2 835 aaKnown RBP9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 GTF3C2Q8WUA4 911 aaPredicted RBP9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 OXCT2Q9BYC2 517 aaPredicted RBP9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 SAP130Q9H0E3 1048 aa9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 GDF2Q9UK05 429 aaPredicted RBP9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 LRFN2Q9ULH4 789 aa9.2□□□□□ -0.94
SEMA3A-206ENST00000471474 AMPD1P23109 780 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 TYRO3Q06418 890 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 SFSWAPQ12872 951 aaKnown RBP9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 UBAP2LQ14157 1087 aaKnown RBP9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 CAPN12Q6ZSI9 719 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 RGL4Q8IZJ4 473 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 GOLGA6L1Q8N7Z2 621 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 NEDD1Q8NHV4 660 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 C7orf43Q8WVR3 580 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 IGFLR1Q9H665 355 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 NDFIP2Q9NV92 336 aa9.19□□□□□ -0.94
SEMA3A-206ENST00000471474 TBC1D8BQ0IIM8 1120 aa9.18□□□□□ -0.94
SEMA3A-206ENST00000471474 SPEM2Q0P670 501 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms