RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 NARFQ9UHQ1 456 aa20.33■□□□□ 0.85
CNOT3-206ENST00000471126 CEMIPQ8WUJ3 1361 aa20.33■□□□□ 0.84
CNOT3-206ENST00000471126 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
CNOT3-206ENST00000471126 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
CNOT3-206ENST00000471126 GRM1Q13255 1194 aa20.31■□□□□ 0.84
CNOT3-206ENST00000471126 PAXIP1Q6ZW49 1069 aaPredicted RBP20.31■□□□□ 0.84
CNOT3-206ENST00000471126 CAPNS2Q96L46 248 aa20.31■□□□□ 0.84
CNOT3-206ENST00000471126 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
CNOT3-206ENST00000471126 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
CNOT3-206ENST00000471126 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
CNOT3-206ENST00000471126 NFATC2IPQ8NCF5 419 aa20.3■□□□□ 0.84
CNOT3-206ENST00000471126 GPR101Q96P66 508 aaPredicted RBP20.3■□□□□ 0.84
CNOT3-206ENST00000471126 SLC52A2Q9HAB3 445 aa20.3■□□□□ 0.84
CNOT3-206ENST00000471126 HACL1Q9UJ83 578 aa20.3■□□□□ 0.84
CNOT3-206ENST00000471126 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
CNOT3-206ENST00000471126 TNRC18O15417 2968 aaPredicted RBP20.29■□□□□ 0.84
CNOT3-206ENST00000471126 EPHX2P34913 555 aa20.29■□□□□ 0.84
CNOT3-206ENST00000471126 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
CNOT3-206ENST00000471126 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
CNOT3-206ENST00000471126 ECE1P42892 770 aa20.28■□□□□ 0.84
CNOT3-206ENST00000471126 CYP4F22Q6NT55 531 aa20.28■□□□□ 0.84
CNOT3-206ENST00000471126 BICDL1Q6ZP65 573 aa20.28■□□□□ 0.84
CNOT3-206ENST00000471126 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
CNOT3-206ENST00000471126 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
CNOT3-206ENST00000471126 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.84
CNOT3-206ENST00000471126 DDX21Q9NR30 783 aaKnown RBP eCLIP20.27■□□□□ 0.84
CNOT3-206ENST00000471126 PDE6BP35913 854 aa20.26■□□□□ 0.83
CNOT3-206ENST00000471126 DGKZQ13574 1117 aa20.26■□□□□ 0.83
CNOT3-206ENST00000471126 PNMA8AQ86V59 439 aaPredicted RBP20.26■□□□□ 0.83
CNOT3-206ENST00000471126 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
CNOT3-206ENST00000471126 DLEC1Q9Y238 1755 aa20.26■□□□□ 0.83
CNOT3-206ENST00000471126 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
CNOT3-206ENST00000471126 ANP32CO43423 234 aa20.25■□□□□ 0.83
CNOT3-206ENST00000471126 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
CNOT3-206ENST00000471126 PDZRN3Q9UPQ7 1066 aa20.25■□□□□ 0.83
CNOT3-206ENST00000471126 AFDNP55196 1824 aaKnown RBP20.25■□□□□ 0.83
CNOT3-206ENST00000471126 ZNF541Q9H0D2 1346 aa20.25■□□□□ 0.83
CNOT3-206ENST00000471126 FMR1Q06787 632 aaKnown RBP eCLIP20.24■□□□□ 0.83
CNOT3-206ENST00000471126 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
CNOT3-206ENST00000471126 COL15A1P39059 1388 aa20.23■□□□□ 0.83
CNOT3-206ENST00000471126 AOC2O75106 756 aa20.23■□□□□ 0.83
CNOT3-206ENST00000471126 CYP19A1P11511 503 aaPredicted RBP20.23■□□□□ 0.83
CNOT3-206ENST00000471126 TJP1Q07157 1748 aa20.23■□□□□ 0.83
CNOT3-206ENST00000471126 NFE2L2Q16236 605 aa20.23■□□□□ 0.83
CNOT3-206ENST00000471126 PRPF38BQ5VTL8 546 aaKnown RBP20.23■□□□□ 0.83
CNOT3-206ENST00000471126 ADAMTS8Q9UP79 889 aa20.23■□□□□ 0.83
CNOT3-206ENST00000471126 DICER1Q9UPY3 1922 aaKnown RBP20.22■□□□□ 0.83
CNOT3-206ENST00000471126 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
CNOT3-206ENST00000471126 ZBTB1Q9Y2K1 713 aa20.22■□□□□ 0.83
CNOT3-206ENST00000471126 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
CNOT3-206ENST00000471126 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
CNOT3-206ENST00000471126 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
CNOT3-206ENST00000471126 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
CNOT3-206ENST00000471126 SCN4AP35499 1836 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 MAP2K2P36507 400 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 SOX10P56693 466 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 PRR5LQ6MZQ0 368 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
CNOT3-206ENST00000471126 CA12O43570 354 aa20.19■□□□□ 0.82
CNOT3-206ENST00000471126 NEFMP07197 916 aa20.19■□□□□ 0.82
CNOT3-206ENST00000471126 TBC1D9BQ66K14 1250 aa20.19■□□□□ 0.82
CNOT3-206ENST00000471126 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
CNOT3-206ENST00000471126 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
CNOT3-206ENST00000471126 PDE4DIPQ5VU43 2346 aa20.19■□□□□ 0.82
CNOT3-206ENST00000471126 CST9Q5W186 159 aa20.18■□□□□ 0.82
CNOT3-206ENST00000471126 STYK1Q6J9G0 422 aa20.18■□□□□ 0.82
CNOT3-206ENST00000471126 ADAMTSL1Q8N6G6 1762 aa20.17■□□□□ 0.82
CNOT3-206ENST00000471126 CANXP27824 592 aaKnown RBP20.17■□□□□ 0.82
CNOT3-206ENST00000471126 TEFQ10587 303 aa20.17■□□□□ 0.82
CNOT3-206ENST00000471126 ZNF277Q9NRM2 450 aaPredicted RBP20.17■□□□□ 0.82
CNOT3-206ENST00000471126 TLL2Q9Y6L7 1015 aa20.17■□□□□ 0.82
CNOT3-206ENST00000471126 THSD7BQ9C0I4 1608 aa20.16■□□□□ 0.82
CNOT3-206ENST00000471126 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
CNOT3-206ENST00000471126 SRGNP10124 158 aa20.16■□□□□ 0.82
CNOT3-206ENST00000471126 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
CNOT3-206ENST00000471126 MCM10Q7L590 875 aa20.16■□□□□ 0.82
CNOT3-206ENST00000471126 RTF1Q92541 710 aaKnown RBP20.16■□□□□ 0.82
CNOT3-206ENST00000471126 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
CNOT3-206ENST00000471126 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
CNOT3-206ENST00000471126 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
CNOT3-206ENST00000471126 VSIG10Q8N0Z9 540 aa20.15■□□□□ 0.82
CNOT3-206ENST00000471126 C7orf43Q8WVR3 580 aa20.15■□□□□ 0.82
CNOT3-206ENST00000471126 TRAF5O00463 557 aa20.14■□□□□ 0.81
CNOT3-206ENST00000471126 FKBP4Q02790 459 aaKnown RBP eCLIP20.14■□□□□ 0.81
CNOT3-206ENST00000471126 DCTN1Q14203 1278 aa20.14■□□□□ 0.81
CNOT3-206ENST00000471126 MASTLQ96GX5 879 aa20.14■□□□□ 0.81
CNOT3-206ENST00000471126 FZD9O00144 591 aa20.13■□□□□ 0.81
CNOT3-206ENST00000471126 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
CNOT3-206ENST00000471126 MRS2Q9HD23 443 aa20.13■□□□□ 0.81
CNOT3-206ENST00000471126 LTBP1Q14766 1721 aa20.13■□□□□ 0.81
CNOT3-206ENST00000471126 RIPK4P57078 832 aa20.12■□□□□ 0.81
CNOT3-206ENST00000471126 GPC2Q8N158 579 aa20.12■□□□□ 0.81
CNOT3-206ENST00000471126 NPHP1O15259 732 aa20.11■□□□□ 0.81
CNOT3-206ENST00000471126 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
CNOT3-206ENST00000471126 BRPF1P55201 1214 aaPredicted RBP20.11■□□□□ 0.81
CNOT3-206ENST00000471126 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
CNOT3-206ENST00000471126 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
CNOT3-206ENST00000471126 HEG1Q9ULI3 1381 aa20.1■□□□□ 0.81
CNOT3-206ENST00000471126 ANKRD31Q8N7Z5 1873 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms