RNA–Protein interactions for RNA: ENST00000470838.1

CPA1-202, Transcript of carboxypeptidase A1, humanhuman

TSL 2

Gene CPA1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-202ENST00000470838 CNKSR1Q969H4 720 aa24.45■■□□□ 1.5
CPA1-202ENST00000470838 CCDC88AQ3V6T2 1871 aa24.45■■□□□ 1.5
CPA1-202ENST00000470838 C7orf43Q8WVR3 580 aa24.44■■□□□ 1.5
CPA1-202ENST00000470838 FER1L6Q2WGJ9 1857 aa24.44■■□□□ 1.5
CPA1-202ENST00000470838 U2AF1L5P0DN76 240 aaPredicted RBP24.43■■□□□ 1.5
CPA1-202ENST00000470838 U2AF1Q01081 240 aaKnown RBP eCLIP24.43■■□□□ 1.5
CPA1-202ENST00000470838 MCM10Q7L590 875 aa24.43■■□□□ 1.5
CPA1-202ENST00000470838 MASTLQ96GX5 879 aa24.43■■□□□ 1.5
CPA1-202ENST00000470838 COL11A2P13942 1736 aaPredicted RBP24.42■■□□□ 1.5
CPA1-202ENST00000470838 NBPF26B4DH59 902 aa24.42■■□□□ 1.5
CPA1-202ENST00000470838 ST5P78524 1137 aa24.42■■□□□ 1.5
CPA1-202ENST00000470838 ERFEQ4G0M1 354 aa24.42■■□□□ 1.5
CPA1-202ENST00000470838 NBPF10Q6P3W6 841 aaKnown RBP24.42■■□□□ 1.5
CPA1-202ENST00000470838 NBPF15Q8N660 670 aa24.42■■□□□ 1.5
CPA1-202ENST00000470838 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
CPA1-202ENST00000470838 PIP4K2AP48426 406 aaPredicted RBP24.41■■□□□ 1.5
CPA1-202ENST00000470838 PRPF40BQ6NWY9 871 aaKnown RBP24.41■■□□□ 1.5
CPA1-202ENST00000470838 SOGA3Q5TF21 947 aa24.4■■□□□ 1.5
CPA1-202ENST00000470838 TAOK3Q9H2K8 898 aa24.4■■□□□ 1.5
CPA1-202ENST00000470838 ZNF219Q9P2Y4 722 aaPredicted RBP24.4■■□□□ 1.5
CPA1-202ENST00000470838 SLX4Q8IY92 1834 aa24.4■■□□□ 1.5
CPA1-202ENST00000470838 DICER1Q9UPY3 1922 aaKnown RBP24.39■■□□□ 1.5
CPA1-202ENST00000470838 TIAM2Q8IVF5 1701 aa24.39■■□□□ 1.5
CPA1-202ENST00000470838 DCTN1Q14203 1278 aa24.39■■□□□ 1.49
CPA1-202ENST00000470838 TAF7Q15545 349 aaPredicted RBP24.39■■□□□ 1.49
CPA1-202ENST00000470838 BCORQ6W2J9 1755 aa24.39■■□□□ 1.49
CPA1-202ENST00000470838 NBPF5PQ86XG9 351 aaPredicted RBP24.38■■□□□ 1.49
CPA1-202ENST00000470838 ZNF652Q9Y2D9 606 aa24.38■■□□□ 1.49
CPA1-202ENST00000470838 NPR1P16066 1061 aa24.36■■□□□ 1.49
CPA1-202ENST00000470838 TPTE2Q6XPS3 522 aa24.36■■□□□ 1.49
CPA1-202ENST00000470838 NPHP1O15259 732 aa24.35■■□□□ 1.49
CPA1-202ENST00000470838 COL13A1Q5TAT6 717 aaPredicted RBP24.34■■□□□ 1.49
CPA1-202ENST00000470838 DDNO94850 711 aaPredicted RBP24.33■■□□□ 1.49
CPA1-202ENST00000470838 NIP7Q9Y221 180 aaKnown RBP eCLIP24.33■■□□□ 1.49
CPA1-202ENST00000470838 ARFGEF2Q9Y6D5 1785 aa24.32■■□□□ 1.48
CPA1-202ENST00000470838 HLFQ16534 295 aa24.32■■□□□ 1.48
CPA1-202ENST00000470838 L3MBTL3Q96JM7 780 aaPredicted RBP24.32■■□□□ 1.48
CPA1-202ENST00000470838 MIS18AQ9NYP9 233 aa24.32■■□□□ 1.48
CPA1-202ENST00000470838 CCDC93Q567U6 631 aa24.31■■□□□ 1.48
CPA1-202ENST00000470838 CHADLQ6NUI6 762 aa24.31■■□□□ 1.48
CPA1-202ENST00000470838 PLEKHF1Q96S99 279 aa24.31■■□□□ 1.48
CPA1-202ENST00000470838 ERVV-1B6SEH8 477 aa24.29■■□□□ 1.48
CPA1-202ENST00000470838 FKBP4Q02790 459 aaKnown RBP eCLIP24.29■■□□□ 1.48
CPA1-202ENST00000470838 PNISRQ8TF01 805 aaKnown RBP24.29■■□□□ 1.48
CPA1-202ENST00000470838 POTEIP0CG38 1075 aa24.28■■□□□ 1.48
CPA1-202ENST00000470838 POTEJP0CG39 1038 aa24.28■■□□□ 1.48
CPA1-202ENST00000470838 ALDH1B1P30837 517 aa24.27■■□□□ 1.48
CPA1-202ENST00000470838 EIF4A1P60842 406 aaKnown RBP24.27■■□□□ 1.48
CPA1-202ENST00000470838 CRY2Q49AN0 593 aa24.27■■□□□ 1.48
CPA1-202ENST00000470838 RTKN2Q8IZC4 609 aa24.27■■□□□ 1.48
CPA1-202ENST00000470838 CREBZFQ9NS37 354 aa24.27■■□□□ 1.48
CPA1-202ENST00000470838 IQCA1LA6NCM1 817 aa24.26■■□□□ 1.47
CPA1-202ENST00000470838 OLFM4Q6UX06 510 aa24.25■■□□□ 1.47
CPA1-202ENST00000470838 TAF1DQ9H5J8 278 aaPredicted RBP24.25■■□□□ 1.47
CPA1-202ENST00000470838 SNED1Q8TER0 1413 aa24.25■■□□□ 1.47
CPA1-202ENST00000470838 ZNF277Q9NRM2 450 aaPredicted RBP24.24■■□□□ 1.47
CPA1-202ENST00000470838 PASKQ96RG2 1323 aa24.24■■□□□ 1.47
CPA1-202ENST00000470838 FZD9O00144 591 aa24.23■■□□□ 1.47
CPA1-202ENST00000470838 NFE2L2Q16236 605 aa24.23■■□□□ 1.47
CPA1-202ENST00000470838 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
CPA1-202ENST00000470838 MAP3K15Q6ZN16 1313 aa24.23■■□□□ 1.47
CPA1-202ENST00000470838 CACNA1SQ13698 1873 aa24.22■■□□□ 1.47
CPA1-202ENST00000470838 FAM177BA6PVY3 158 aa24.22■■□□□ 1.47
CPA1-202ENST00000470838 HSPA1AP0DMV8 641 aaKnown RBP24.22■■□□□ 1.47
CPA1-202ENST00000470838 HSPA1BP0DMV9 641 aaKnown RBP24.22■■□□□ 1.47
CPA1-202ENST00000470838 HOXA10P31260 410 aaPredicted RBP24.22■■□□□ 1.47
CPA1-202ENST00000470838 TTLL7Q6ZT98 887 aa24.22■■□□□ 1.47
CPA1-202ENST00000470838 PSMD1Q99460 953 aa24.22■■□□□ 1.47
CPA1-202ENST00000470838 NYXQ9GZU5 481 aa24.22■■□□□ 1.47
CPA1-202ENST00000470838 ITGBL1O95965 494 aaPredicted RBP24.21■■□□□ 1.47
CPA1-202ENST00000470838 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
CPA1-202ENST00000470838 SCN4AP35499 1836 aa24.21■■□□□ 1.47
CPA1-202ENST00000470838 ZNF541Q9H0D2 1346 aa24.2■■□□□ 1.46
CPA1-202ENST00000470838 NEFMP07197 916 aa24.2■■□□□ 1.46
CPA1-202ENST00000470838 GTF2E1P29083 439 aaPredicted RBP24.2■■□□□ 1.46
CPA1-202ENST00000470838 CC2D2BQ6DHV5 1058 aa24.2■■□□□ 1.46
CPA1-202ENST00000470838 KDM3BQ7LBC6 1761 aa24.2■■□□□ 1.46
CPA1-202ENST00000470838 RIC1Q4ADV7 1423 aa24.19■■□□□ 1.46
CPA1-202ENST00000470838 ABCC12Q96J65 1359 aa24.19■■□□□ 1.46
CPA1-202ENST00000470838 IBTKQ9P2D0 1353 aaPredicted RBP24.19■■□□□ 1.46
CPA1-202ENST00000470838 IARSP41252 1262 aaKnown RBP24.19■■□□□ 1.46
CPA1-202ENST00000470838 ZNF34Q8IZ26 560 aa24.19■■□□□ 1.46
CPA1-202ENST00000470838 RRP7AQ9Y3A4 280 aaKnown RBP24.19■■□□□ 1.46
CPA1-202ENST00000470838 LAMB4A4D0S4 1761 aa24.19■■□□□ 1.46
CPA1-202ENST00000470838 ERBB4Q15303 1308 aa24.18■■□□□ 1.46
CPA1-202ENST00000470838 NUTM1Q86Y26 1132 aa24.18■■□□□ 1.46
CPA1-202ENST00000470838 NGEFQ8N5V2 710 aa24.18■■□□□ 1.46
CPA1-202ENST00000470838 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
CPA1-202ENST00000470838 DLG5Q8TDM6 1919 aa24.18■■□□□ 1.46
CPA1-202ENST00000470838 UBN2Q6ZU65 1347 aa24.17■■□□□ 1.46
CPA1-202ENST00000470838 LRP10Q7Z4F1 713 aa24.17■■□□□ 1.46
CPA1-202ENST00000470838 TNS4Q8IZW8 715 aa24.17■■□□□ 1.46
CPA1-202ENST00000470838 PNNQ9H307 717 aaKnown RBP24.17■■□□□ 1.46
CPA1-202ENST00000470838 HACL1Q9UJ83 578 aa24.17■■□□□ 1.46
CPA1-202ENST00000470838 GRIPAP1Q4V328 841 aa24.16■■□□□ 1.46
CPA1-202ENST00000470838 SUSD4Q5VX71 490 aa24.16■■□□□ 1.46
CPA1-202ENST00000470838 GPC2Q8N158 579 aa24.16■■□□□ 1.46
CPA1-202ENST00000470838 NUP98P52948 1817 aa24.16■■□□□ 1.46
CPA1-202ENST00000470838 GIGYF2Q6Y7W6 1299 aaKnown RBP24.15■■□□□ 1.46
CPA1-202ENST00000470838 KIF6Q6ZMV9 814 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms