RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 METTL22Q9BUU2 404 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-233ENST00000470710 CCNL1Q9UK58 526 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-233ENST00000470710 SBF2Q86WG5 1849 aa10.98□□□□□ -0.65
HDLBP-233ENST00000470710 EIF5P55010 431 aaKnown RBP10.97□□□□□ -0.65
HDLBP-233ENST00000470710 NEXNQ0ZGT2 675 aa10.97□□□□□ -0.65
HDLBP-233ENST00000470710 SLC27A3Q5K4L6 730 aa10.97□□□□□ -0.65
HDLBP-233ENST00000470710 TTLL7Q6ZT98 887 aa10.97□□□□□ -0.65
HDLBP-233ENST00000470710 PCDHB15Q9Y5E8 787 aa10.97□□□□□ -0.65
HDLBP-233ENST00000470710 RREB1Q92766 1687 aa10.96□□□□□ -0.65
HDLBP-233ENST00000470710 GNAI3P08754 354 aa10.96□□□□□ -0.65
HDLBP-233ENST00000470710 KIF6Q6ZMV9 814 aa10.96□□□□□ -0.65
HDLBP-233ENST00000470710 MEIS3Q99687 375 aa10.96□□□□□ -0.65
HDLBP-233ENST00000470710 MAP3K15Q6ZN16 1313 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 KDM2BQ8NHM5 1336 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 ERVV-1B6SEH8 477 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 PLSCR1O15162 318 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 IGKV5-2P06315 115 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 HDAC1Q13547 482 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-233ENST00000470710 NPM2Q86SE8 214 aaKnown RBP10.95□□□□□ -0.66
HDLBP-233ENST00000470710 USP44Q9H0E7 712 aa10.95□□□□□ -0.66
HDLBP-233ENST00000470710 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
HDLBP-233ENST00000470710 UTYO14607 1347 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 A0A087WZG4 1122 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 RGL2O15211 777 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 GNAI2P04899 355 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
HDLBP-233ENST00000470710 CENPQQ7L2Z9 268 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-233ENST00000470710 MYD88Q99836 296 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 RWDD1Q9H446 243 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-233ENST00000470710 HDAC5Q9UQL6 1122 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
HDLBP-233ENST00000470710 LY75O60449 1722 aa10.94□□□□□ -0.66
HDLBP-233ENST00000470710 RPS6KA4O75676 772 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
HDLBP-233ENST00000470710 KCNQ4P56696 695 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 GCKRQ14397 625 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 CWF19L2Q2TBE0 894 aaKnown RBP10.93□□□□□ -0.66
HDLBP-233ENST00000470710 HSP90AB3PQ58FF7 597 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 GIGYF2Q6Y7W6 1299 aaKnown RBP10.93□□□□□ -0.66
HDLBP-233ENST00000470710 DZIP3Q86Y13 1208 aaKnown RBP10.93□□□□□ -0.66
HDLBP-233ENST00000470710 ISCA1Q9BUE6 129 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 ZBTB3Q9H5J0 574 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 LRRC4BQ9NT99 713 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 EP400Q96L91 3159 aa10.93□□□□□ -0.66
HDLBP-233ENST00000470710 COL5A3P25940 1745 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-233ENST00000470710 COL15A1P39059 1388 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 GRM8O00222 908 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 CAMTA2O94983 1202 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 APBA3O96018 575 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 TXNRD1Q16881 649 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 RPAP2Q8IXW5 612 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-233ENST00000470710 ANKRD44Q8N8A2 993 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 CCDC191Q8NCU4 936 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 C1orf115Q9H7X2 142 aa10.92□□□□□ -0.66
HDLBP-233ENST00000470710 C9orf78Q9NZ63 289 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-233ENST00000470710 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
HDLBP-233ENST00000470710 GNPATO15228 680 aa10.91□□□□□ -0.66
HDLBP-233ENST00000470710 IGHDP01880 384 aa10.91□□□□□ -0.66
HDLBP-233ENST00000470710 NBPF7P0C2Y1 421 aaPredicted RBP10.91□□□□□ -0.66
HDLBP-233ENST00000470710 CEP85Q6P2H3 762 aa10.91□□□□□ -0.66
HDLBP-233ENST00000470710 PROM2Q8N271 834 aa10.91□□□□□ -0.66
HDLBP-233ENST00000470710 CWC25Q9NXE8 425 aaPredicted RBP10.91□□□□□ -0.66
HDLBP-233ENST00000470710 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
HDLBP-233ENST00000470710 MYH14Q7Z406 1995 aaKnown RBP10.9□□□□□ -0.66
HDLBP-233ENST00000470710 NUP188Q5SRE5 1749 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 HLFQ16534 295 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 CLEC4GQ6UXB4 293 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 SIRT2Q8IXJ6 389 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 AK7Q96M32 723 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 ARXQ96QS3 562 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
HDLBP-233ENST00000470710 LRRFIP2Q9Y608 721 aaKnown RBP10.9□□□□□ -0.66
HDLBP-233ENST00000470710 H7C1W4 665 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 HMMRO75330 724 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 CASP7P55210 303 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 ATP8B2P98198 1209 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 MTX1Q13505 466 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 ZNF34Q8IZ26 560 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 ARFGEF2Q9Y6D5 1785 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
HDLBP-233ENST00000470710 SSFA2P28290 1259 aa10.88□□□□□ -0.67
HDLBP-233ENST00000470710 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
HDLBP-233ENST00000470710 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
HDLBP-233ENST00000470710 SUCLG2Q96I99 432 aa10.88□□□□□ -0.67
HDLBP-233ENST00000470710 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
HDLBP-233ENST00000470710 TNS1Q9HBL0 1735 aaKnown RBP10.87□□□□□ -0.67
HDLBP-233ENST00000470710 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
HDLBP-233ENST00000470710 POLA2Q14181 598 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 PARP10Q53GL7 1025 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 TRAPPC3LQ5T215 181 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 UBE3BQ7Z3V4 1068 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 AMIGO3Q86WK7 504 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
HDLBP-233ENST00000470710 GCC1Q96CN9 775 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 KAZALD1Q96I82 304 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 CAMKK2Q96RR4 588 aa10.87□□□□□ -0.67
HDLBP-233ENST00000470710 RGPD3A6NKT7 1758 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms