RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 NEXNQ0ZGT2 675 aa19.04■□□□□ 0.64
COL4A5-203ENST00000470339 ITPK1Q13572 414 aa19.04■□□□□ 0.64
COL4A5-203ENST00000470339 RWDD1Q9H446 243 aaPredicted RBP19.04■□□□□ 0.64
COL4A5-203ENST00000470339 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
COL4A5-203ENST00000470339 KDM2BQ8NHM5 1336 aa19.03■□□□□ 0.64
COL4A5-203ENST00000470339 HDAC1Q13547 482 aaPredicted RBP19.03■□□□□ 0.64
COL4A5-203ENST00000470339 INTS5Q6P9B9 1019 aaKnown RBP19.03■□□□□ 0.64
COL4A5-203ENST00000470339 HDAC5Q9UQL6 1122 aa19.03■□□□□ 0.64
COL4A5-203ENST00000470339 AFDNP55196 1824 aaKnown RBP19.02■□□□□ 0.64
COL4A5-203ENST00000470339 CRKLP46109 303 aaKnown RBP19.02■□□□□ 0.64
COL4A5-203ENST00000470339 RC3H1Q5TC82 1133 aaKnown RBP19.02■□□□□ 0.64
COL4A5-203ENST00000470339 MEIS3Q99687 375 aa19.02■□□□□ 0.64
COL4A5-203ENST00000470339 USP44Q9H0E7 712 aa19.02■□□□□ 0.64
COL4A5-203ENST00000470339 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
COL4A5-203ENST00000470339 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
COL4A5-203ENST00000470339 KIF6Q6ZMV9 814 aa19.01■□□□□ 0.63
COL4A5-203ENST00000470339 TTLL7Q6ZT98 887 aa19.01■□□□□ 0.63
COL4A5-203ENST00000470339 RPAP2Q8IXW5 612 aaPredicted RBP19.01■□□□□ 0.63
COL4A5-203ENST00000470339 ZBTB1Q9Y2K1 713 aa19.01■□□□□ 0.63
COL4A5-203ENST00000470339 GNAI2P04899 355 aa19■□□□□ 0.63
COL4A5-203ENST00000470339 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
COL4A5-203ENST00000470339 ERVV-1B6SEH8 477 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 TRIM37O94972 964 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 IGHDP01880 384 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 CCNL1Q9UK58 526 aaPredicted RBP18.99■□□□□ 0.63
COL4A5-203ENST00000470339 NUP98P52948 1817 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 UTYO14607 1347 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 MAP3K15Q6ZN16 1313 aa18.99■□□□□ 0.63
COL4A5-203ENST00000470339 NEURL1BA8MQ27 555 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 IGKV5-2P06315 115 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
COL4A5-203ENST00000470339 SLC27A3Q5K4L6 730 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 LINC00116Q8NCU8 138 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 MYD88Q99836 296 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
COL4A5-203ENST00000470339 A0A087WZG4 1122 aa18.97■□□□□ 0.63
COL4A5-203ENST00000470339 TRIM28Q13263 835 aaKnown RBP18.97■□□□□ 0.63
COL4A5-203ENST00000470339 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
COL4A5-203ENST00000470339 PLSCR1O15162 318 aa18.96■□□□□ 0.63
COL4A5-203ENST00000470339 RGL2O15211 777 aa18.96■□□□□ 0.63
COL4A5-203ENST00000470339 GCKRQ14397 625 aa18.96■□□□□ 0.63
COL4A5-203ENST00000470339 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
COL4A5-203ENST00000470339 HSP90AB3PQ58FF7 597 aa18.96■□□□□ 0.63
COL4A5-203ENST00000470339 GIGYF2Q6Y7W6 1299 aaKnown RBP18.96■□□□□ 0.63
COL4A5-203ENST00000470339 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
COL4A5-203ENST00000470339 GRM8O00222 908 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 TCIRG1Q13488 830 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 CEP85Q6P2H3 762 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
COL4A5-203ENST00000470339 CCDC191Q8NCU4 936 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 ZBTB3Q9H5J0 574 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 RGPD3A6NKT7 1758 aaPredicted RBP18.95■□□□□ 0.62
COL4A5-203ENST00000470339 RGPD4Q7Z3J3 1758 aa18.95■□□□□ 0.62
COL4A5-203ENST00000470339 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
COL4A5-203ENST00000470339 SIRT2Q8IXJ6 389 aa18.94■□□□□ 0.62
COL4A5-203ENST00000470339 ISCA1Q9BUE6 129 aa18.94■□□□□ 0.62
COL4A5-203ENST00000470339 ZNF330Q9Y3S2 320 aaPredicted RBP18.94■□□□□ 0.62
COL4A5-203ENST00000470339 TNS1Q9HBL0 1735 aaKnown RBP18.94■□□□□ 0.62
COL4A5-203ENST00000470339 COL15A1P39059 1388 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 EP400Q96L91 3159 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 HMMRO75330 724 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 RPS6KA4O75676 772 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 NBPF7P0C2Y1 421 aaPredicted RBP18.93■□□□□ 0.62
COL4A5-203ENST00000470339 SMC5Q8IY18 1101 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
COL4A5-203ENST00000470339 BCORQ6W2J9 1755 aa18.93■□□□□ 0.62
COL4A5-203ENST00000470339 ATP8B2P98198 1209 aa18.92■□□□□ 0.62
COL4A5-203ENST00000470339 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
COL4A5-203ENST00000470339 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
COL4A5-203ENST00000470339 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 H7C1W4 665 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 KCNQ4P56696 695 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 MTX1Q13505 466 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 CLEC4GQ6UXB4 293 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 ARXQ96QS3 562 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 LRRC4BQ9NT99 713 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 TBC1D2BQ9UPU7 963 aa18.9■□□□□ 0.62
COL4A5-203ENST00000470339 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
COL4A5-203ENST00000470339 APBA3O96018 575 aa18.89■□□□□ 0.61
COL4A5-203ENST00000470339 HLFQ16534 295 aa18.89■□□□□ 0.61
COL4A5-203ENST00000470339 DCTPP1Q9H773 170 aa18.89■□□□□ 0.61
COL4A5-203ENST00000470339 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
COL4A5-203ENST00000470339 UBR3Q6ZT12 1888 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 ADRA2BP18089 450 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 CASP7P55210 303 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 TXNRD1Q16881 649 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 ZNF34Q8IZ26 560 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
COL4A5-203ENST00000470339 GNPATO15228 680 aa18.87■□□□□ 0.61
COL4A5-203ENST00000470339 SCN7AQ01118 1682 aa18.87■□□□□ 0.61
COL4A5-203ENST00000470339 POLA2Q14181 598 aa18.86■□□□□ 0.61
COL4A5-203ENST00000470339 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
COL4A5-203ENST00000470339 PROM2Q8N271 834 aa18.86■□□□□ 0.61
COL4A5-203ENST00000470339 AK7Q96M32 723 aa18.86■□□□□ 0.61
COL4A5-203ENST00000470339 NARFQ9UHQ1 456 aa18.86■□□□□ 0.61
COL4A5-203ENST00000470339 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
COL4A5-203ENST00000470339 PARP10Q53GL7 1025 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms