RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 KCTD17Q8N5Z5 321 aa8.3□□□□□ -1.08
ITGA6-209ENST00000470259 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L15C9J2P7 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L13C9JLJ4 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L11C9JVI0 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L21D6R901 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L18D6R9N7 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L22D6RA61 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L17D6RBQ6 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L19D6RCP7 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L20D6RJB6 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 DKK1O94907 266 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 RFX1P22670 979 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 GSK3AP49840 483 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 USP17L24Q0WX57 530 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 PTK7Q13308 1070 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 SAMD5Q5TGI4 173 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
ITGA6-209ENST00000470259 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 MARK1Q9P0L2 795 aa8.29□□□□□ -1.08
ITGA6-209ENST00000470259 SHISA8B8ZZ34 492 aa8.28□□□□□ -1.08
ITGA6-209ENST00000470259 ARAFP10398 606 aa8.28□□□□□ -1.08
ITGA6-209ENST00000470259 ANKMY2Q8IV38 441 aa8.28□□□□□ -1.08
ITGA6-209ENST00000470259 NGLY1Q96IV0 654 aa8.28□□□□□ -1.08
ITGA6-209ENST00000470259 ANKIB1Q9P2G1 1089 aa8.28□□□□□ -1.08
ITGA6-209ENST00000470259 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
ITGA6-209ENST00000470259 FAM196BA6NMK8 535 aa8.27□□□□□ -1.09
ITGA6-209ENST00000470259 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
ITGA6-209ENST00000470259 C1orf53Q5VUE5 145 aa8.27□□□□□ -1.09
ITGA6-209ENST00000470259 SLCO4C1Q6ZQN7 724 aa8.27□□□□□ -1.09
ITGA6-209ENST00000470259 STRN4Q9NRL3 753 aa8.27□□□□□ -1.09
ITGA6-209ENST00000470259 C21orf2O43822 256 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 ADH6P28332 368 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 LAMC2Q13753 1193 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 CFAP70Q5T0N1 1121 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 GAS2L2Q8NHY3 880 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
ITGA6-209ENST00000470259 EPXP11678 715 aa8.25□□□□□ -1.09
ITGA6-209ENST00000470259 HIRAP54198 1017 aaPredicted RBP8.25□□□□□ -1.09
ITGA6-209ENST00000470259 PCBP4P57723 403 aaKnown RBP8.25□□□□□ -1.09
ITGA6-209ENST00000470259 ALDH16A1Q8IZ83 802 aa8.25□□□□□ -1.09
ITGA6-209ENST00000470259 HCN2Q9UL51 889 aa8.25□□□□□ -1.09
ITGA6-209ENST00000470259 EFSO43281 561 aa8.24□□□□□ -1.09
ITGA6-209ENST00000470259 SNRPNP63162 240 aaKnown RBP8.24□□□□□ -1.09
ITGA6-209ENST00000470259 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
ITGA6-209ENST00000470259 C7orf43Q8WVR3 580 aa8.24□□□□□ -1.09
ITGA6-209ENST00000470259 C2orf49Q9BVC5 232 aaPredicted RBP8.24□□□□□ -1.09
ITGA6-209ENST00000470259 ZMYND15Q9H091 742 aa8.24□□□□□ -1.09
ITGA6-209ENST00000470259 MKL2Q9ULH7 1088 aa8.24□□□□□ -1.09
ITGA6-209ENST00000470259 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
ITGA6-209ENST00000470259 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
ITGA6-209ENST00000470259 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
ITGA6-209ENST00000470259 BTBD6Q96KE9 485 aa8.23□□□□□ -1.09
ITGA6-209ENST00000470259 SUSD3Q96L08 255 aa8.23□□□□□ -1.09
ITGA6-209ENST00000470259 HIF1AQ16665 826 aa8.22□□□□□ -1.09
ITGA6-209ENST00000470259 ZNF468Q5VIY5 522 aaPredicted RBP8.22□□□□□ -1.09
ITGA6-209ENST00000470259 VTI1AQ96AJ9 217 aa8.22□□□□□ -1.09
ITGA6-209ENST00000470259 BRD7Q9NPI1 651 aa8.22□□□□□ -1.09
ITGA6-209ENST00000470259 AVENQ9NQS1 362 aaPredicted RBP8.22□□□□□ -1.09
ITGA6-209ENST00000470259 KLF15Q9UIH9 416 aa8.22□□□□□ -1.09
ITGA6-209ENST00000470259 IGFBP4P22692 258 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 NEUROD1Q13562 356 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 GPAT2Q6NUI2 795 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 POTEAQ6S8J7 498 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 SYT9Q86SS6 491 aa8.21□□□□□ -1.1
ITGA6-209ENST00000470259 PIK3R2O00459 728 aa8.2□□□□□ -1.1
ITGA6-209ENST00000470259 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
ITGA6-209ENST00000470259 ARXQ96QS3 562 aa8.2□□□□□ -1.1
ITGA6-209ENST00000470259 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
ITGA6-209ENST00000470259 KCNH4Q9UQ05 1017 aa8.2□□□□□ -1.1
ITGA6-209ENST00000470259 GTF3C3Q9Y5Q9 886 aa8.2□□□□□ -1.1
ITGA6-209ENST00000470259 ALAS2P22557 587 aa8.19□□□□□ -1.1
ITGA6-209ENST00000470259 SPEM2Q0P670 501 aa8.19□□□□□ -1.1
ITGA6-209ENST00000470259 CHSY3Q70JA7 882 aa8.19□□□□□ -1.1
ITGA6-209ENST00000470259 DCAF5Q96JK2 942 aa8.19□□□□□ -1.1
ITGA6-209ENST00000470259 SLC30A3Q99726 388 aa8.19□□□□□ -1.1
ITGA6-209ENST00000470259 TYRO3Q06418 890 aa8.18□□□□□ -1.1
ITGA6-209ENST00000470259 RTN1Q16799 776 aa8.18□□□□□ -1.1
ITGA6-209ENST00000470259 BTLAQ7Z6A9 289 aa8.18□□□□□ -1.1
ITGA6-209ENST00000470259 RAB44Q7Z6P3 723 aaPredicted RBP8.18□□□□□ -1.1
ITGA6-209ENST00000470259 CCDC97Q96F63 343 aaPredicted RBP8.17□□□□□ -1.1
ITGA6-209ENST00000470259 ELOA3CA0A087WX78 387 aaPredicted RBP8.16□□□□□ -1.1
ITGA6-209ENST00000470259 ELOA3DA6NLF2 546 aaPredicted RBP8.16□□□□□ -1.1
ITGA6-209ENST00000470259 GNB5O14775 395 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 SIN3BO75182 1162 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 WEE1P30291 646 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 ELOA3BQ3SY89 546 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 LINC00114Q6XXX2 140 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 ELOA3Q8NG57 546 aa8.16□□□□□ -1.1
ITGA6-209ENST00000470259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.16□□□□□ -1.1
ITGA6-209ENST00000470259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.15□□□□□ -1.1
ITGA6-209ENST00000470259 FOXO3O43524 673 aa8.15□□□□□ -1.1
ITGA6-209ENST00000470259 BHMTQ93088 406 aa8.15□□□□□ -1.1
ITGA6-209ENST00000470259 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
ITGA6-209ENST00000470259 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms