RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
CCDC171-204ENST00000470191 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
CCDC171-204ENST00000470191 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
CCDC171-204ENST00000470191 A1BGP04217 495 aa12.38□□□□□ -0.43
CCDC171-204ENST00000470191 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-204ENST00000470191 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-204ENST00000470191 LBX1P52954 281 aa12.38□□□□□ -0.43
CCDC171-204ENST00000470191 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC171-204ENST00000470191 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
CCDC171-204ENST00000470191 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
CCDC171-204ENST00000470191 ZNF496Q96IT1 587 aaPredicted RBP12.38□□□□□ -0.43
CCDC171-204ENST00000470191 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
CCDC171-204ENST00000470191 ST5P78524 1137 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 TEFQ10587 303 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 LDHDQ86WU2 507 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
CCDC171-204ENST00000470191 PRDM10Q9NQV6 1147 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
CCDC171-204ENST00000470191 HEG1Q9ULI3 1381 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 OLFM4Q6UX06 510 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 ZNF541Q9H0D2 1346 aa12.36□□□□□ -0.43
CCDC171-204ENST00000470191 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
CCDC171-204ENST00000470191 SRGNP10124 158 aa12.35□□□□□ -0.43
CCDC171-204ENST00000470191 MASTLQ96GX5 879 aa12.35□□□□□ -0.43
CCDC171-204ENST00000470191 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-204ENST00000470191 U2SURPO15042 1029 aaKnown RBP12.34□□□□□ -0.43
CCDC171-204ENST00000470191 CAMTA2O94983 1202 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 ITGBL1O95965 494 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-204ENST00000470191 IL6STP40189 918 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-204ENST00000470191 GRM1Q13255 1194 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
CCDC171-204ENST00000470191 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
CCDC171-204ENST00000470191 PCGF6Q9BYE7 350 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 HACL1Q9UJ83 578 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
CCDC171-204ENST00000470191 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 KCNQ3O43525 872 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 EPHX2P34913 555 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 DEFB115Q30KQ5 88 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 CCDC93Q567U6 631 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 CC2D1BQ5T0F9 858 aaKnown RBP12.33□□□□□ -0.44
CCDC171-204ENST00000470191 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-204ENST00000470191 NBPF5PQ86XG9 351 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-204ENST00000470191 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
CCDC171-204ENST00000470191 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
CCDC171-204ENST00000470191 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
CCDC171-204ENST00000470191 GNAT3A8MTJ3 354 aa12.32□□□□□ -0.44
CCDC171-204ENST00000470191 HSPA8P11142 646 aaKnown RBP12.32□□□□□ -0.44
CCDC171-204ENST00000470191 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC171-204ENST00000470191 ABHD8Q96I13 439 aa12.32□□□□□ -0.44
CCDC171-204ENST00000470191 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
CCDC171-204ENST00000470191 FMNL2Q96PY5 1086 aa12.32□□□□□ -0.44
CCDC171-204ENST00000470191 PRAMEF22A3QJZ6 481 aa12.31□□□□□ -0.44
CCDC171-204ENST00000470191 FMR1Q06787 632 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC171-204ENST00000470191 AMER1Q5JTC6 1135 aaPredicted RBP12.31□□□□□ -0.44
CCDC171-204ENST00000470191 CNTROBQ8N137 903 aa12.31□□□□□ -0.44
CCDC171-204ENST00000470191 GJA3Q9Y6H8 435 aa12.31□□□□□ -0.44
CCDC171-204ENST00000470191 TRPM7Q96QT4 1865 aa12.31□□□□□ -0.44
CCDC171-204ENST00000470191 WDR33Q9C0J8 1336 aaKnown RBP12.31□□□□□ -0.44
CCDC171-204ENST00000470191 CCDC85CA6NKD9 419 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 NPR1P16066 1061 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 SYNE4Q8N205 404 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 C7orf43Q8WVR3 580 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
CCDC171-204ENST00000470191 IARSP41252 1262 aaKnown RBP12.29□□□□□ -0.44
CCDC171-204ENST00000470191 TRIM26Q12899 539 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-204ENST00000470191 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
CCDC171-204ENST00000470191 TSKSQ9UJT2 592 aa12.29□□□□□ -0.44
CCDC171-204ENST00000470191 LTBP1Q14766 1721 aa12.28□□□□□ -0.44
CCDC171-204ENST00000470191 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CCDC171-204ENST00000470191 SLC34A2O95436 690 aa12.28□□□□□ -0.44
CCDC171-204ENST00000470191 GTF2E1P29083 439 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-204ENST00000470191 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
CCDC171-204ENST00000470191 GAS2L2Q8NHY3 880 aa12.28□□□□□ -0.44
CCDC171-204ENST00000470191 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC171-204ENST00000470191 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
CCDC171-204ENST00000470191 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
CCDC171-204ENST00000470191 MAP2K1Q02750 393 aaPredicted RBP12.27□□□□□ -0.45
CCDC171-204ENST00000470191 CYP4F22Q6NT55 531 aa12.27□□□□□ -0.45
CCDC171-204ENST00000470191 TPTE2Q6XPS3 522 aa12.27□□□□□ -0.45
CCDC171-204ENST00000470191 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
CCDC171-204ENST00000470191 COL4A5P29400 1685 aa12.26□□□□□ -0.45
CCDC171-204ENST00000470191 NUP98P52948 1817 aa12.26□□□□□ -0.45
CCDC171-204ENST00000470191 NGEFQ8N5V2 710 aa12.26□□□□□ -0.45
CCDC171-204ENST00000470191 JDP2Q8WYK2 163 aa12.26□□□□□ -0.45
CCDC171-204ENST00000470191 CAPNS2Q96L46 248 aa12.26□□□□□ -0.45
CCDC171-204ENST00000470191 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms