RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 VRTNQ9H8Y1 702 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 GDF2Q9UK05 429 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-208ENST00000470170 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
COL11A1-208ENST00000470170 CNTNAP5Q8WYK1 1306 aa11.37□□□□□ -0.59
COL11A1-208ENST00000470170 GDF11O95390 407 aa11.37□□□□□ -0.59
COL11A1-208ENST00000470170 SAMD5Q5TGI4 173 aa11.37□□□□□ -0.59
COL11A1-208ENST00000470170 TMEM151AQ8N4L1 468 aa11.37□□□□□ -0.59
COL11A1-208ENST00000470170 STRN4Q9NRL3 753 aa11.37□□□□□ -0.59
COL11A1-208ENST00000470170 FAM196BA6NMK8 535 aa11.36□□□□□ -0.59
COL11A1-208ENST00000470170 HIRAP54198 1017 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-208ENST00000470170 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
COL11A1-208ENST00000470170 PHACTR1Q9C0D0 580 aa11.36□□□□□ -0.59
COL11A1-208ENST00000470170 SLCO4C1Q6ZQN7 724 aa11.35□□□□□ -0.59
COL11A1-208ENST00000470170 EDARADDQ8WWZ3 215 aa11.35□□□□□ -0.59
COL11A1-208ENST00000470170 SCG3Q8WXD2 468 aaKnown RBP11.35□□□□□ -0.59
COL11A1-208ENST00000470170 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
COL11A1-208ENST00000470170 NEUROD4Q9HD90 331 aa11.35□□□□□ -0.59
COL11A1-208ENST00000470170 DNMT3AQ9Y6K1 912 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-208ENST00000470170 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
COL11A1-208ENST00000470170 EFSO43281 561 aa11.34□□□□□ -0.59
COL11A1-208ENST00000470170 ARAFP10398 606 aa11.34□□□□□ -0.59
COL11A1-208ENST00000470170 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
COL11A1-208ENST00000470170 ANKMY2Q8IV38 441 aa11.34□□□□□ -0.59
COL11A1-208ENST00000470170 KCTD17Q8N5Z5 321 aa11.34□□□□□ -0.59
COL11A1-208ENST00000470170 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-208ENST00000470170 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 SNRPNP63162 240 aaKnown RBP11.33□□□□□ -0.6
COL11A1-208ENST00000470170 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 PODNQ7Z5L7 613 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 GAS2L2Q8NHY3 880 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 HSH2DQ96JZ2 352 aa11.33□□□□□ -0.6
COL11A1-208ENST00000470170 GPC6Q9Y625 555 aaPredicted RBP11.33□□□□□ -0.6
COL11A1-208ENST00000470170 RFX1P22670 979 aa11.32□□□□□ -0.6
COL11A1-208ENST00000470170 KANK3Q6NY19 840 aa11.32□□□□□ -0.6
COL11A1-208ENST00000470170 ARXQ96QS3 562 aa11.32□□□□□ -0.6
COL11A1-208ENST00000470170 C2orf49Q9BVC5 232 aaPredicted RBP11.32□□□□□ -0.6
COL11A1-208ENST00000470170 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
COL11A1-208ENST00000470170 BEND7Q8N7W2 519 aaPredicted RBP11.31□□□□□ -0.6
COL11A1-208ENST00000470170 NGLY1Q96IV0 654 aa11.31□□□□□ -0.6
COL11A1-208ENST00000470170 KLF15Q9UIH9 416 aa11.31□□□□□ -0.6
COL11A1-208ENST00000470170 PHF20L1A8MW92 1017 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 EPXP11678 715 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 GRIN2CQ14957 1233 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 ALDH16A1Q8IZ83 802 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 ZNF280CQ8ND82 737 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
COL11A1-208ENST00000470170 AMPD1P23109 780 aa11.29□□□□□ -0.6
COL11A1-208ENST00000470170 ADH6P28332 368 aa11.29□□□□□ -0.6
COL11A1-208ENST00000470170 PCBP4P57723 403 aaKnown RBP11.29□□□□□ -0.6
COL11A1-208ENST00000470170 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
COL11A1-208ENST00000470170 STAG2Q8N3U4 1231 aa11.29□□□□□ -0.6
COL11A1-208ENST00000470170 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
COL11A1-208ENST00000470170 ZNF468Q5VIY5 522 aaPredicted RBP11.28□□□□□ -0.6
COL11A1-208ENST00000470170 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
COL11A1-208ENST00000470170 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
COL11A1-208ENST00000470170 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
COL11A1-208ENST00000470170 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
COL11A1-208ENST00000470170 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
COL11A1-208ENST00000470170 HOXB4P17483 251 aaPredicted RBP11.26□□□□□ -0.61
COL11A1-208ENST00000470170 IGFBP4P22692 258 aa11.26□□□□□ -0.61
COL11A1-208ENST00000470170 BTBD6Q96KE9 485 aa11.26□□□□□ -0.61
COL11A1-208ENST00000470170 CEP63Q96MT8 703 aa11.26□□□□□ -0.61
COL11A1-208ENST00000470170 SLC30A3Q99726 388 aa11.25□□□□□ -0.61
COL11A1-208ENST00000470170 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
COL11A1-208ENST00000470170 TYRO3Q06418 890 aa11.24□□□□□ -0.61
COL11A1-208ENST00000470170 FAM200AQ8TCP9 573 aa11.24□□□□□ -0.61
COL11A1-208ENST00000470170 MKL2Q9ULH7 1088 aa11.24□□□□□ -0.61
COL11A1-208ENST00000470170 NOVA2Q9UNW9 492 aaKnown RBP11.24□□□□□ -0.61
COL11A1-208ENST00000470170 CHSY3Q70JA7 882 aa11.23□□□□□ -0.61
COL11A1-208ENST00000470170 SYT9Q86SS6 491 aa11.23□□□□□ -0.61
COL11A1-208ENST00000470170 GTF3C3Q9Y5Q9 886 aa11.23□□□□□ -0.61
COL11A1-208ENST00000470170 RAB44Q7Z6P3 723 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-208ENST00000470170 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
COL11A1-208ENST00000470170 WEE1P30291 646 aa11.21□□□□□ -0.61
COL11A1-208ENST00000470170 RTN1Q16799 776 aa11.21□□□□□ -0.61
COL11A1-208ENST00000470170 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.61
COL11A1-208ENST00000470170 BTLAQ7Z6A9 289 aa11.21□□□□□ -0.61
COL11A1-208ENST00000470170 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
COL11A1-208ENST00000470170 DGKGP49619 791 aa11.2□□□□□ -0.62
COL11A1-208ENST00000470170 SPEM2Q0P670 501 aa11.2□□□□□ -0.62
COL11A1-208ENST00000470170 GPAT2Q6NUI2 795 aa11.2□□□□□ -0.62
COL11A1-208ENST00000470170 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
COL11A1-208ENST00000470170 KCNH4Q9UQ05 1017 aa11.19□□□□□ -0.62
COL11A1-208ENST00000470170 BCS1LQ9Y276 419 aa11.19□□□□□ -0.62
COL11A1-208ENST00000470170 KCNQ4P56696 695 aa11.18□□□□□ -0.62
COL11A1-208ENST00000470170 HIF1AQ16665 826 aa11.18□□□□□ -0.62
COL11A1-208ENST00000470170 SUV39H2Q9H5I1 410 aa11.18□□□□□ -0.62
COL11A1-208ENST00000470170 FOXO3O43524 673 aa11.17□□□□□ -0.62
COL11A1-208ENST00000470170 SIN3BO75182 1162 aa11.17□□□□□ -0.62
COL11A1-208ENST00000470170 COL8A1P27658 744 aa11.17□□□□□ -0.62
COL11A1-208ENST00000470170 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
COL11A1-208ENST00000470170 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
COL11A1-208ENST00000470170 KLK14Q9P0G3 267 aa11.17□□□□□ -0.62
COL11A1-208ENST00000470170 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
COL11A1-208ENST00000470170 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
COL11A1-208ENST00000470170 ELOA3DA6NLF2 546 aaPredicted RBP11.16□□□□□ -0.62
COL11A1-208ENST00000470170 ELOA3BQ3SY89 546 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms