RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MCM5P33992 734 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 PSME1Q06323 249 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 USP48Q86UV5 1035 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 RUFY2Q8WXA3 655 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 ECHDC1Q9NTX5 307 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 MAP3K2Q9Y2U5 619 aa16.46■□□□□ 0.23
BRCA1-209ENST00000470026 TCHHQ07283 1943 aa16.46■□□□□ 0.22
BRCA1-209ENST00000470026 TPM2P07951 284 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 TERF1P54274 439 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
BRCA1-209ENST00000470026 ANKLE2Q86XL3 938 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 GADD45BO75293 160 aaPredicted RBP16.45■□□□□ 0.22
BRCA1-209ENST00000470026 ZSCAN22P10073 491 aaPredicted RBP16.45■□□□□ 0.22
BRCA1-209ENST00000470026 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
BRCA1-209ENST00000470026 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
BRCA1-209ENST00000470026 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
BRCA1-209ENST00000470026 PHF14O94880 888 aa16.44■□□□□ 0.22
BRCA1-209ENST00000470026 GCP02774 474 aa16.44■□□□□ 0.22
BRCA1-209ENST00000470026 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
BRCA1-209ENST00000470026 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
BRCA1-209ENST00000470026 C1orf141Q5JVX7 400 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 VPS53Q5VIR6 699 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 EVI5LQ96CN4 794 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 DIAPH3Q9NSV4 1193 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 ZKSCAN5Q9Y2L8 839 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 MST1RQ04912 1400 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 NECTIN1Q15223 517 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
BRCA1-209ENST00000470026 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 KAZALD1Q96I82 304 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
BRCA1-209ENST00000470026 STX6O43752 255 aa16.42■□□□□ 0.22
BRCA1-209ENST00000470026 SYT1P21579 422 aa16.42■□□□□ 0.22
BRCA1-209ENST00000470026 PTH1RQ03431 593 aa16.42■□□□□ 0.22
BRCA1-209ENST00000470026 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
BRCA1-209ENST00000470026 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
BRCA1-209ENST00000470026 MRC1P22897 1456 aa16.42■□□□□ 0.22
BRCA1-209ENST00000470026 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
BRCA1-209ENST00000470026 GDPD2Q9HCC8 539 aa16.42■□□□□ 0.22
BRCA1-209ENST00000470026 DDX21Q9NR30 783 aaKnown RBP eCLIP16.42■□□□□ 0.22
BRCA1-209ENST00000470026 F13A1P00488 732 aa16.41■□□□□ 0.22
BRCA1-209ENST00000470026 UVSSAQ2YD98 709 aa16.41■□□□□ 0.22
BRCA1-209ENST00000470026 FAM184AQ8NB25 1140 aa16.41■□□□□ 0.22
BRCA1-209ENST00000470026 SH2B1Q9NRF2 756 aaPredicted RBP16.41■□□□□ 0.22
BRCA1-209ENST00000470026 CCDC39Q9UFE4 941 aa16.41■□□□□ 0.22
BRCA1-209ENST00000470026 GRM8O00222 908 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 LARGE1O95461 756 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
BRCA1-209ENST00000470026 PDIA6Q15084 440 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
BRCA1-209ENST00000470026 SASH1O94885 1247 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
BRCA1-209ENST00000470026 UBE2HP62256 183 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 CWF19L2Q2TBE0 894 aaKnown RBP16.4■□□□□ 0.22
BRCA1-209ENST00000470026 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 SMC3Q9UQE7 1217 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
BRCA1-209ENST00000470026 PRAMEF22A3QJZ6 481 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 HIP1O00291 1037 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 RRP9O43818 475 aaKnown RBP16.39■□□□□ 0.21
BRCA1-209ENST00000470026 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 PDRG1Q9NUG6 133 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
BRCA1-209ENST00000470026 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
BRCA1-209ENST00000470026 JCADQ9P266 1359 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
BRCA1-209ENST00000470026 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
BRCA1-209ENST00000470026 AACSQ86V21 672 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 RNF214Q8ND24 703 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 UBE2Q2Q8WVN8 375 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
BRCA1-209ENST00000470026 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
BRCA1-209ENST00000470026 JAKMIP1Q96N16 626 aaKnown RBP16.38■□□□□ 0.21
BRCA1-209ENST00000470026 MTMR6Q9Y217 621 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 CYP46A1Q9Y6A2 500 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 C5P01031 1676 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 SCN11AQ9UI33 1791 aa16.38■□□□□ 0.21
BRCA1-209ENST00000470026 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-209ENST00000470026 CPA1P15085 419 aa16.37■□□□□ 0.21
BRCA1-209ENST00000470026 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-209ENST00000470026 ABCC6O95255 1503 aa16.37■□□□□ 0.21
BRCA1-209ENST00000470026 ORAI2Q96SN7 254 aa16.37■□□□□ 0.21
BRCA1-209ENST00000470026 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
BRCA1-209ENST00000470026 BICC1Q9H694 974 aaKnown RBP16.37■□□□□ 0.21
BRCA1-209ENST00000470026 AXIN2Q9Y2T1 843 aa16.37■□□□□ 0.21
BRCA1-209ENST00000470026 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
BRCA1-209ENST00000470026 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
BRCA1-209ENST00000470026 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
BRCA1-209ENST00000470026 IGKV5-2P06315 115 aa16.36■□□□□ 0.21
BRCA1-209ENST00000470026 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms