RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 A0A087WZG4 1122 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 BCAR3O75815 825 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 GYS1P13807 737 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 ZNF428Q96B54 188 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 ZBTB3Q9H5J0 574 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 SMC4Q9NTJ3 1288 aa18.96■□□□□ 0.63
COL9A3-209ENST00000469852 PPP1R1BQ9UD71 204 aaPredicted RBP18.96■□□□□ 0.63
COL9A3-209ENST00000469852 FLIIQ13045 1269 aa18.95■□□□□ 0.62
COL9A3-209ENST00000469852 HLFQ16534 295 aa18.95■□□□□ 0.62
COL9A3-209ENST00000469852 MSL1Q68DK7 614 aa18.95■□□□□ 0.62
COL9A3-209ENST00000469852 MAP3K15Q6ZN16 1313 aa18.95■□□□□ 0.62
COL9A3-209ENST00000469852 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
COL9A3-209ENST00000469852 FKBP8Q14318 412 aa18.94■□□□□ 0.62
COL9A3-209ENST00000469852 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
COL9A3-209ENST00000469852 COL24A1Q17RW2 1714 aa18.94■□□□□ 0.62
COL9A3-209ENST00000469852 ADCY9O60503 1353 aa18.93■□□□□ 0.62
COL9A3-209ENST00000469852 ZPR1O75312 459 aa18.93■□□□□ 0.62
COL9A3-209ENST00000469852 KIF6Q6ZMV9 814 aa18.93■□□□□ 0.62
COL9A3-209ENST00000469852 ANKRD36CQ5JPF3 1778 aa18.92■□□□□ 0.62
COL9A3-209ENST00000469852 YY1P25490 414 aa18.92■□□□□ 0.62
COL9A3-209ENST00000469852 PTGER2P43116 358 aa18.92■□□□□ 0.62
COL9A3-209ENST00000469852 ANKRD13DQ6ZTN6 518 aa18.91■□□□□ 0.62
COL9A3-209ENST00000469852 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
COL9A3-209ENST00000469852 PI4KAP2A4QPH2 592 aa18.9■□□□□ 0.62
COL9A3-209ENST00000469852 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
COL9A3-209ENST00000469852 BRPF1P55201 1214 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-209ENST00000469852 FKBP5Q13451 457 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-209ENST00000469852 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
COL9A3-209ENST00000469852 PI4KAP1Q8N8J0 262 aa18.9■□□□□ 0.62
COL9A3-209ENST00000469852 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
COL9A3-209ENST00000469852 ATF5Q9Y2D1 282 aaPredicted RBP18.9■□□□□ 0.62
COL9A3-209ENST00000469852 F6X3S4 739 aa18.89■□□□□ 0.61
COL9A3-209ENST00000469852 GIGYF2Q6Y7W6 1299 aaKnown RBP18.89■□□□□ 0.61
COL9A3-209ENST00000469852 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
COL9A3-209ENST00000469852 NOB1Q9ULX3 412 aaKnown RBP18.89■□□□□ 0.61
COL9A3-209ENST00000469852 TNNQ9UQP3 1299 aa18.89■□□□□ 0.61
COL9A3-209ENST00000469852 MAP3K2Q9Y2U5 619 aa18.89■□□□□ 0.61
COL9A3-209ENST00000469852 NFIXQ14938 502 aa18.88■□□□□ 0.61
COL9A3-209ENST00000469852 KSR2Q6VAB6 950 aa18.88■□□□□ 0.61
COL9A3-209ENST00000469852 BICDL1Q6ZP65 573 aa18.88■□□□□ 0.61
COL9A3-209ENST00000469852 RIC3Q7Z5B4 369 aa18.88■□□□□ 0.61
COL9A3-209ENST00000469852 MTFR1LQ9H019 292 aa18.88■□□□□ 0.61
COL9A3-209ENST00000469852 DDR1Q08345 913 aa18.87■□□□□ 0.61
COL9A3-209ENST00000469852 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
COL9A3-209ENST00000469852 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
COL9A3-209ENST00000469852 ATP10DQ9P241 1426 aa18.87■□□□□ 0.61
COL9A3-209ENST00000469852 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
COL9A3-209ENST00000469852 PTPRCP08575 1304 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 DDX58O95786 925 aaKnown RBP18.86■□□□□ 0.61
COL9A3-209ENST00000469852 GPTP24298 496 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 TM4SF1P30408 202 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 NLGN1Q8N2Q7 840 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-209ENST00000469852 MYD88Q99836 296 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 SGIP1Q9BQI5 828 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 ZNF652Q9Y2D9 606 aa18.86■□□□□ 0.61
COL9A3-209ENST00000469852 KIF16BQ96L93 1317 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 RGL2O15211 777 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 MMP10P09238 476 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 ZNF34Q8IZ26 560 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 DNAAF4Q8WXU2 420 aa18.85■□□□□ 0.61
COL9A3-209ENST00000469852 METTL22Q9BUU2 404 aaPredicted RBP18.85■□□□□ 0.61
COL9A3-209ENST00000469852 NRXN2Q9P2S2 1712 aa18.84■□□□□ 0.61
COL9A3-209ENST00000469852 POLRMTO00411 1230 aaKnown RBP18.84■□□□□ 0.61
COL9A3-209ENST00000469852 NIP7Q9Y221 180 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL9A3-209ENST00000469852 N4BP2Q86UW6 1770 aaPredicted RBP18.83■□□□□ 0.61
COL9A3-209ENST00000469852 DCAF8L1A6NGE4 600 aa18.83■□□□□ 0.6
COL9A3-209ENST00000469852 PLIN1O60240 522 aa18.83■□□□□ 0.6
COL9A3-209ENST00000469852 IGKV5-2P06315 115 aa18.83■□□□□ 0.6
COL9A3-209ENST00000469852 ISCA1Q9BUE6 129 aa18.83■□□□□ 0.6
COL9A3-209ENST00000469852 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
COL9A3-209ENST00000469852 TRIM27P14373 513 aa18.82■□□□□ 0.6
COL9A3-209ENST00000469852 CWF19L2Q2TBE0 894 aaKnown RBP18.82■□□□□ 0.6
COL9A3-209ENST00000469852 CARMIL3Q8ND23 1372 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 HSP90AB3PQ58FF7 597 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 SUSD4Q5VX71 490 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 NLRP10Q86W26 655 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 SETDB2Q96T68 719 aa18.81■□□□□ 0.6
COL9A3-209ENST00000469852 FHDC1Q9C0D6 1143 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-209ENST00000469852 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 SERPINB2P05120 415 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 ATF7IPQ6VMQ6 1270 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 ARHGAP45Q92619 1136 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 CLUAP1Q96AJ1 413 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 SYT17Q9BSW7 474 aa18.8■□□□□ 0.6
COL9A3-209ENST00000469852 API5Q9BZZ5 524 aaKnown RBP18.8■□□□□ 0.6
COL9A3-209ENST00000469852 ABCC4O15439 1325 aa18.79■□□□□ 0.6
COL9A3-209ENST00000469852 NEURL1BA8MQ27 555 aa18.79■□□□□ 0.6
COL9A3-209ENST00000469852 NTSR2O95665 410 aa18.78■□□□□ 0.6
COL9A3-209ENST00000469852 RLBP1P12271 317 aa18.78■□□□□ 0.6
COL9A3-209ENST00000469852 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
COL9A3-209ENST00000469852 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms