RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 PALD1Q9ULE6 856 aa18.16■□□□□ 0.5
KCNC4-206ENST00000469655 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
KCNC4-206ENST00000469655 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
KCNC4-206ENST00000469655 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
KCNC4-206ENST00000469655 TRMT1Q9NXH9 659 aaKnown RBP18.16■□□□□ 0.5
KCNC4-206ENST00000469655 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 SLC20A2Q08357 652 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
KCNC4-206ENST00000469655 CNPY2Q9Y2B0 182 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
KCNC4-206ENST00000469655 FBXO38Q6PIJ6 1188 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 SYTL4Q96C24 671 aaPredicted RBP18.15■□□□□ 0.5
KCNC4-206ENST00000469655 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 USP6P35125 1406 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 TULP2O00295 520 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
KCNC4-206ENST00000469655 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 RASSF4Q9H2L5 321 aa18.15■□□□□ 0.5
KCNC4-206ENST00000469655 TTC22Q5TAA0 569 aa18.14■□□□□ 0.5
KCNC4-206ENST00000469655 SPG7Q9UQ90 795 aa18.14■□□□□ 0.5
KCNC4-206ENST00000469655 TSPYL1Q9H0U9 437 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 NRXN3Q9Y4C0 1643 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 CCDC183Q5T5S1 534 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 KRBA2Q6ZNG9 492 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 ZNF397Q8NF99 534 aaPredicted RBP18.14■□□□□ 0.49
KCNC4-206ENST00000469655 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
KCNC4-206ENST00000469655 SURF6O75683 361 aaKnown RBP18.13■□□□□ 0.49
KCNC4-206ENST00000469655 CAMK4Q16566 473 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 TRIM5Q9C035 493 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 PNMA6EA0A0J9YXQ4 647 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
KCNC4-206ENST00000469655 SYT10Q6XYQ8 523 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 LRRFIP2Q9Y608 721 aaKnown RBP18.13■□□□□ 0.49
KCNC4-206ENST00000469655 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
KCNC4-206ENST00000469655 ANKRD44Q8N8A2 993 aa18.12■□□□□ 0.49
KCNC4-206ENST00000469655 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
KCNC4-206ENST00000469655 GORABQ5T7V8 394 aa18.12■□□□□ 0.49
KCNC4-206ENST00000469655 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
KCNC4-206ENST00000469655 CWC27Q6UX04 472 aaKnown RBP18.11■□□□□ 0.49
KCNC4-206ENST00000469655 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
KCNC4-206ENST00000469655 SIL1Q9H173 461 aa18.11■□□□□ 0.49
KCNC4-206ENST00000469655 RBM6P78332 1123 aaKnown RBP18.11■□□□□ 0.49
KCNC4-206ENST00000469655 THEMISQ8N1K5 641 aaPredicted RBP18.11■□□□□ 0.49
KCNC4-206ENST00000469655 DRC1Q96MC2 740 aa18.11■□□□□ 0.49
KCNC4-206ENST00000469655 LUZP1Q86V48 1076 aa18.1■□□□□ 0.49
KCNC4-206ENST00000469655 PHAXQ9H814 394 aaKnown RBP18.1■□□□□ 0.49
KCNC4-206ENST00000469655 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
KCNC4-206ENST00000469655 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
KCNC4-206ENST00000469655 PATL2C9JE40 543 aaKnown RBP18.08■□□□□ 0.49
KCNC4-206ENST00000469655 BRD1O95696 1058 aa18.08■□□□□ 0.49
KCNC4-206ENST00000469655 MX1P20591 662 aa18.08■□□□□ 0.49
KCNC4-206ENST00000469655 RPAP2Q8IXW5 612 aaPredicted RBP18.08■□□□□ 0.49
KCNC4-206ENST00000469655 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
KCNC4-206ENST00000469655 FAM173BQ6P4H8 233 aa18.08■□□□□ 0.49
KCNC4-206ENST00000469655 TECPR2O15040 1411 aa18.08■□□□□ 0.48
KCNC4-206ENST00000469655 DHX16O60231 1041 aaKnown RBP18.08■□□□□ 0.48
KCNC4-206ENST00000469655 SART3Q15020 963 aaKnown RBP18.08■□□□□ 0.48
KCNC4-206ENST00000469655 LCMT1Q9UIC8 334 aa18.08■□□□□ 0.48
KCNC4-206ENST00000469655 RTL1A6NKG5 1358 aa18.08■□□□□ 0.48
KCNC4-206ENST00000469655 FLT4P35916 1363 aa18.08■□□□□ 0.48
KCNC4-206ENST00000469655 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 OVOS2A0A0J9YW53 1432 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 OVOS2Q6IE36 1432 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 CHRM1P11229 460 aaPredicted RBP18.07■□□□□ 0.48
KCNC4-206ENST00000469655 FLIIQ13045 1269 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 STK3Q13188 491 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 ESCO1Q5FWF5 840 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 ZCCHC17Q9NP64 241 aaKnown RBP18.07■□□□□ 0.48
KCNC4-206ENST00000469655 SETD1AO15047 1707 aaKnown RBP18.07■□□□□ 0.48
KCNC4-206ENST00000469655 HOXC9P31274 260 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 CYP2C19P33261 490 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 SKIDA1Q1XH10 827 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 TEX35Q5T0J7 233 aa18.07■□□□□ 0.48
KCNC4-206ENST00000469655 ERC2O15083 957 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 HMMRO75330 724 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 CNPY4Q8N129 248 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 PAXBP1Q9Y5B6 917 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 NDUFB9Q9Y6M9 179 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 REC8O95072 547 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 TPM3P06753 285 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 IL25Q9H293 177 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 ERCC6LQ2NKX8 1250 aa18.06■□□□□ 0.48
KCNC4-206ENST00000469655 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
KCNC4-206ENST00000469655 PTPRCP08575 1304 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 PDE1AP54750 535 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
KCNC4-206ENST00000469655 IL17REQ8NFR9 667 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 PTPN14Q15678 1187 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 E2F4Q16254 413 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 KCNG1Q9UIX4 513 aa18.05■□□□□ 0.48
KCNC4-206ENST00000469655 MYO1CO00159 1063 aa18.04■□□□□ 0.48
KCNC4-206ENST00000469655 GNAI2P04899 355 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms