RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 INTS4Q96HW7 963 aaKnown RBP20.61■□□□□ 0.89
CBX6-203ENST00000469420 PA2G4Q9UQ80 394 aaKnown RBP20.61■□□□□ 0.89
CBX6-203ENST00000469420 USP42Q9H9J4 1324 aaKnown RBP20.61■□□□□ 0.89
CBX6-203ENST00000469420 LSG1Q9H089 658 aaKnown RBP20.6■□□□□ 0.89
CBX6-203ENST00000469420 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
CBX6-203ENST00000469420 CLCN1P35523 988 aa20.59■□□□□ 0.89
CBX6-203ENST00000469420 CWC27Q6UX04 472 aaKnown RBP20.59■□□□□ 0.89
CBX6-203ENST00000469420 NLRP2Q9NX02 1062 aa20.59■□□□□ 0.89
CBX6-203ENST00000469420 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
CBX6-203ENST00000469420 TTC41PQ6P2S7 1318 aa20.58■□□□□ 0.89
CBX6-203ENST00000469420 CHRNA2Q15822 529 aa20.58■□□□□ 0.89
CBX6-203ENST00000469420 NSFL1CQ9UNZ2 370 aaKnown RBP20.58■□□□□ 0.89
CBX6-203ENST00000469420 SNX14Q9Y5W7 946 aa20.58■□□□□ 0.89
CBX6-203ENST00000469420 GLRX3O76003 335 aaKnown RBP20.58■□□□□ 0.88
CBX6-203ENST00000469420 ATF3P18847 181 aa20.58■□□□□ 0.88
CBX6-203ENST00000469420 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.88
CBX6-203ENST00000469420 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
CBX6-203ENST00000469420 ESPNB1AK53 854 aa20.57■□□□□ 0.88
CBX6-203ENST00000469420 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
CBX6-203ENST00000469420 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
CBX6-203ENST00000469420 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.57■□□□□ 0.88
CBX6-203ENST00000469420 PHKG2P15735 406 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 CCDC173Q0VFZ6 552 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
CBX6-203ENST00000469420 ZNF790Q6PG37 636 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 SUCLG2Q96I99 432 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 SLC52A2Q9HAB3 445 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 TMEM63CQ9P1W3 806 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
CBX6-203ENST00000469420 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
CBX6-203ENST00000469420 RAPGEF4Q8WZA2 1011 aa20.55■□□□□ 0.88
CBX6-203ENST00000469420 DCCP43146 1447 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 GRM8O00222 908 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 PRIM1P49642 420 aaKnown RBP20.54■□□□□ 0.88
CBX6-203ENST00000469420 LINS1Q8NG48 757 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 TTC14Q96N46 770 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
CBX6-203ENST00000469420 DIAPH3Q9NSV4 1193 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 ECHDC1Q9NTX5 307 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 TNS3Q68CZ2 1445 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 KIAA1211Q6ZU35 1233 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 RBSNQ9H1K0 784 aa20.54■□□□□ 0.88
CBX6-203ENST00000469420 BICC1Q9H694 974 aaKnown RBP20.54■□□□□ 0.88
CBX6-203ENST00000469420 IGKV5-2P06315 115 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 IFIT2P09913 472 aaKnown RBP20.53■□□□□ 0.88
CBX6-203ENST00000469420 FOXD4L6Q3SYB3 417 aaPredicted RBP20.53■□□□□ 0.88
CBX6-203ENST00000469420 FOXD4L3Q6VB84 417 aaPredicted RBP20.53■□□□□ 0.88
CBX6-203ENST00000469420 RPAP1Q9BWH6 1393 aaPredicted RBP20.53■□□□□ 0.88
CBX6-203ENST00000469420 GLI3P10071 1580 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 CYP27B1O15528 508 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 HSPA2P54652 639 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 AK2P54819 239 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 AACSQ86V21 672 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 ERC1Q8IUD2 1116 aa20.53■□□□□ 0.88
CBX6-203ENST00000469420 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
CBX6-203ENST00000469420 PIP4K2AP48426 406 aaPredicted RBP20.52■□□□□ 0.88
CBX6-203ENST00000469420 GPATCH3Q96I76 525 aa20.52■□□□□ 0.88
CBX6-203ENST00000469420 ZNF496Q96IT1 587 aaPredicted RBP20.52■□□□□ 0.88
CBX6-203ENST00000469420 SYCE3A1L190 88 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 DDX58O95786 925 aaKnown RBP20.51■□□□□ 0.87
CBX6-203ENST00000469420 CPA1P15085 419 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 TATP17735 454 aaPredicted RBP20.51■□□□□ 0.87
CBX6-203ENST00000469420 ANP32BQ92688 251 aaKnown RBP20.51■□□□□ 0.87
CBX6-203ENST00000469420 TCHHQ07283 1943 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 UTYO14607 1347 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 MRC1P22897 1456 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 MBD3O95983 291 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 MYL6BP14649 208 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 PTH1RQ03431 593 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 ABCC6O95255 1503 aa20.51■□□□□ 0.87
CBX6-203ENST00000469420 RUFY3Q7L099 469 aa20.5■□□□□ 0.87
CBX6-203ENST00000469420 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
CBX6-203ENST00000469420 HDAC5Q9UQL6 1122 aa20.5■□□□□ 0.87
CBX6-203ENST00000469420 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
CBX6-203ENST00000469420 SASH1O94885 1247 aa20.5■□□□□ 0.87
CBX6-203ENST00000469420 GDPD2Q9HCC8 539 aa20.5■□□□□ 0.87
CBX6-203ENST00000469420 CSB-PGBD3P0DP91 1061 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 CASTP20810 708 aaKnown RBP20.49■□□□□ 0.87
CBX6-203ENST00000469420 RIC3Q7Z5B4 369 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 RUFY2Q8WXA3 655 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 WDR33Q9C0J8 1336 aaKnown RBP20.49■□□□□ 0.87
CBX6-203ENST00000469420 LRSAM1Q6UWE0 723 aa20.49■□□□□ 0.87
CBX6-203ENST00000469420 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
CBX6-203ENST00000469420 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
CBX6-203ENST00000469420 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
CBX6-203ENST00000469420 SIL1Q9H173 461 aa20.48■□□□□ 0.87
CBX6-203ENST00000469420 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
CBX6-203ENST00000469420 ADCK5Q3MIX3 580 aa20.47■□□□□ 0.87
CBX6-203ENST00000469420 PRPF40BQ6NWY9 871 aaKnown RBP20.47■□□□□ 0.87
CBX6-203ENST00000469420 IFNL2Q8IZJ0 200 aa20.47■□□□□ 0.87
CBX6-203ENST00000469420 EVI5LQ96CN4 794 aa20.47■□□□□ 0.87
CBX6-203ENST00000469420 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
CBX6-203ENST00000469420 LIMCH1Q9UPQ0 1083 aa20.47■□□□□ 0.87
CBX6-203ENST00000469420 LARGE1O95461 756 aa20.47■□□□□ 0.87
CBX6-203ENST00000469420 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms