RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 LDHDQ86WU2 507 aa17.32■□□□□ 0.36
TRAPPC12-216ENST00000469400 L3MBTL3Q96JM7 780 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC12-216ENST00000469400 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
TRAPPC12-216ENST00000469400 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
TRAPPC12-216ENST00000469400 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
TRAPPC12-216ENST00000469400 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
TRAPPC12-216ENST00000469400 GAS2L2Q8NHY3 880 aa17.31■□□□□ 0.36
TRAPPC12-216ENST00000469400 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
TRAPPC12-216ENST00000469400 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC12-216ENST00000469400 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
TRAPPC12-216ENST00000469400 PRDM10Q9NQV6 1147 aa17.3■□□□□ 0.36
TRAPPC12-216ENST00000469400 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
TRAPPC12-216ENST00000469400 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC12-216ENST00000469400 KCNQ3O43525 872 aa17.29■□□□□ 0.36
TRAPPC12-216ENST00000469400 VEGFBP49765 207 aa17.29■□□□□ 0.36
TRAPPC12-216ENST00000469400 KIF7Q2M1P5 1343 aa17.28■□□□□ 0.36
TRAPPC12-216ENST00000469400 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
TRAPPC12-216ENST00000469400 ITGBL1O95965 494 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC12-216ENST00000469400 CCDC93Q567U6 631 aa17.28■□□□□ 0.36
TRAPPC12-216ENST00000469400 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC12-216ENST00000469400 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 CTCFP49711 727 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 EAPPQ56P03 285 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 AIDAQ96BJ3 306 aa17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 ZNF277Q9NRM2 450 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
TRAPPC12-216ENST00000469400 CEMIPQ8WUJ3 1361 aa17.27■□□□□ 0.35
TRAPPC12-216ENST00000469400 ZNF541Q9H0D2 1346 aa17.26■□□□□ 0.35
TRAPPC12-216ENST00000469400 NPR1P16066 1061 aa17.26■□□□□ 0.35
TRAPPC12-216ENST00000469400 FKBP4Q02790 459 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRAPPC12-216ENST00000469400 CLEC4GQ6UXB4 293 aa17.26■□□□□ 0.35
TRAPPC12-216ENST00000469400 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 KLRG2A4D1S0 409 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 WBP1LQ9NX94 342 aa17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
TRAPPC12-216ENST00000469400 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 EPHX2P34913 555 aa17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 SCN4AP35499 1836 aa17.24■□□□□ 0.35
TRAPPC12-216ENST00000469400 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
TRAPPC12-216ENST00000469400 LBX1P52954 281 aa17.23■□□□□ 0.35
TRAPPC12-216ENST00000469400 TPTE2Q6XPS3 522 aa17.23■□□□□ 0.35
TRAPPC12-216ENST00000469400 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
TRAPPC12-216ENST00000469400 CACNA1SQ13698 1873 aa17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 PNMA8AQ86V59 439 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 BCORQ6W2J9 1755 aa17.22■□□□□ 0.35
TRAPPC12-216ENST00000469400 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
TRAPPC12-216ENST00000469400 RASSF10A6NK89 507 aa17.21■□□□□ 0.35
TRAPPC12-216ENST00000469400 FZD9O00144 591 aa17.21■□□□□ 0.35
TRAPPC12-216ENST00000469400 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
TRAPPC12-216ENST00000469400 MAP1SQ66K74 1059 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC12-216ENST00000469400 FAM177BA6PVY3 158 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 DEFB115Q30KQ5 88 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 NBPF10Q6P3W6 841 aaKnown RBP17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 SYNE4Q8N205 404 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 NBPF15Q8N660 670 aa17.2■□□□□ 0.34
TRAPPC12-216ENST00000469400 RGL2O15211 777 aa17.19■□□□□ 0.34
TRAPPC12-216ENST00000469400 ALDH1B1P30837 517 aa17.19■□□□□ 0.34
TRAPPC12-216ENST00000469400 GPC2Q8N158 579 aa17.19■□□□□ 0.34
TRAPPC12-216ENST00000469400 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
TRAPPC12-216ENST00000469400 NPC1L1Q9UHC9 1359 aa17.18■□□□□ 0.34
TRAPPC12-216ENST00000469400 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
TRAPPC12-216ENST00000469400 HSPA8P11142 646 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-216ENST00000469400 WDR33Q9C0J8 1336 aaKnown RBP17.18■□□□□ 0.34
TRAPPC12-216ENST00000469400 HLFQ16534 295 aa17.17■□□□□ 0.34
TRAPPC12-216ENST00000469400 MCM10Q7L590 875 aa17.17■□□□□ 0.34
TRAPPC12-216ENST00000469400 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-216ENST00000469400 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 MAP2K1Q02750 393 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 ABHD8Q96I13 439 aa17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 PSMD1Q99460 953 aa17.16■□□□□ 0.34
TRAPPC12-216ENST00000469400 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRAPPC12-216ENST00000469400 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
TRAPPC12-216ENST00000469400 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
TRAPPC12-216ENST00000469400 CRY2Q49AN0 593 aa17.14■□□□□ 0.33
TRAPPC12-216ENST00000469400 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-216ENST00000469400 GJA3Q9Y6H8 435 aa17.14■□□□□ 0.33
TRAPPC12-216ENST00000469400 EIF6P56537 245 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-216ENST00000469400 CC2D2BQ6DHV5 1058 aa17.13■□□□□ 0.33
TRAPPC12-216ENST00000469400 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
TRAPPC12-216ENST00000469400 CFAP53Q96M91 514 aa17.13■□□□□ 0.33
TRAPPC12-216ENST00000469400 ABCC12Q96J65 1359 aa17.13■□□□□ 0.33
TRAPPC12-216ENST00000469400 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-216ENST00000469400 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-216ENST00000469400 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC12-216ENST00000469400 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.332e-31■■■■■ 109.2
TRAPPC12-216ENST00000469400 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms