RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CCZ1BP86790 482 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 CCZ1P86791 482 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 SNW1Q13573 536 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC144BQ3MJ40 725 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 CEP85Q6P2H3 762 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 LCMT1Q9UIC8 334 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 ZCCHC11Q5TAX3 1644 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 POLR3GO15318 223 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 CCP110O43303 1012 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 CPP00450 1065 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 LEKR1Q6ZMV7 388 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 UBXN4Q92575 508 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 CLSTN2Q9H4D0 955 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 MROH2AA6NES4 1674 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 PHLPP2Q6ZVD8 1323 aa10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 CDK12Q9NYV4 1490 aaPredicted RBP10.62□□□□□ -0.71
SMARCE1-207ENST00000469334 ZNF165P49910 485 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 KRT85P78386 507 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 ST5P78524 1137 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 RPAINQ86UA6 219 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 BANK1Q8NDB2 785 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 CHMP4CQ96CF2 233 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 SLC12A5Q9H2X9 1139 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 SETD1AO15047 1707 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 HSPA4P34932 840 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 GYS2P54840 703 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 DNM1Q05193 864 aaKnown RBP10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 TMX1Q9H3N1 280 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 ANO2Q9NQ90 1003 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 IMPACTQ9P2X3 320 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 LIMCH1Q9UPQ0 1083 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 KIF20BQ96Q89 1820 aa10.61□□□□□ -0.71
SMARCE1-207ENST00000469334 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 CPSF1Q10570 1443 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 EFCAB8A8MWE9 144 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 NRDCO43847 1150 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 FCHSD2O94868 740 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 CHMLP26374 656 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 HAP1P54257 671 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 GSCP56915 257 aaPredicted RBP10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 SMC1AQ14683 1233 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 TTC14Q96N46 770 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 MKRN1Q9UHC7 482 aaKnown RBP10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 MTMR6Q9Y217 621 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 AOX1Q06278 1338 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 NPHP3Q7Z494 1330 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 TTC21AQ8NDW8 1320 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 PNPLA6Q8IY17 1366 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 PPLO60437 1756 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 MCTP2Q6DN12 878 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 REXO1L1PQ8IX06 675 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 PREX1Q8TCU6 1659 aa10.6□□□□□ -0.71
SMARCE1-207ENST00000469334 DLG5Q8TDM6 1919 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 ARHGEF28Q8N1W1 1705 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 SALL3Q9BXA9 1300 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 TBC1D8O95759 1140 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 TSGA10IPQ3SY00 556 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 CT47A1Q5JQC4 288 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 JAKMIP3Q5VZ66 844 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 PACS2Q86VP3 889 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 MSL3Q8N5Y2 521 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC150Q8NCX0 1101 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 UPF3BQ9BZI7 483 aaKnown RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 SCAND2PQ9GZW5 306 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 OSBPL5Q9H0X9 879 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 SH2B1Q9NRF2 756 aaPredicted RBP10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
SMARCE1-207ENST00000469334 TADA3O75528 432 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 ZNF853P0CG23 659 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 MED4Q9NPJ6 270 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 EXOC6BQ9Y2D4 811 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 TULP4Q9NRJ4 1543 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 MLECQ14165 292 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 CC2D1AQ6P1N0 951 aaPredicted RBP10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 MMS22LQ6ZRQ5 1243 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 DRC1Q96MC2 740 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 CXorf56Q9H5V9 222 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 DNAI1Q9UI46 699 aa10.58□□□□□ -0.72
SMARCE1-207ENST00000469334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 LIG1P18858 919 aa10.57□□□□□ -0.72
SMARCE1-207ENST00000469334 LMAN1P49257 510 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms