RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 USP44Q9H0E7 712 aa16.19■□□□□ 0.18
RUNX1-213ENST00000469087 LRRC4BQ9NT99 713 aa16.19■□□□□ 0.18
RUNX1-213ENST00000469087 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
RUNX1-213ENST00000469087 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 ATP10DQ9P241 1426 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 ARXQ96QS3 562 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 MYD88Q99836 296 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 C1orf115Q9H7X2 142 aa16.18■□□□□ 0.18
RUNX1-213ENST00000469087 N4BP2Q86UW6 1770 aaPredicted RBP16.17■□□□□ 0.18
RUNX1-213ENST00000469087 ALDH1L1O75891 902 aa16.17■□□□□ 0.18
RUNX1-213ENST00000469087 IGHDP01880 384 aa16.17■□□□□ 0.18
RUNX1-213ENST00000469087 PROM2Q8N271 834 aa16.17■□□□□ 0.18
RUNX1-213ENST00000469087 RREB1Q92766 1687 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 APBA3O96018 575 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 NEXNQ0ZGT2 675 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
RUNX1-213ENST00000469087 TBC1D2BQ9UPU7 963 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 ARFGEF2Q9Y6D5 1785 aa16.16■□□□□ 0.18
RUNX1-213ENST00000469087 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 PLSCR1O15162 318 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 TAF1LQ8IZX4 1826 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
RUNX1-213ENST00000469087 HLFQ16534 295 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 NPM2Q86SE8 214 aaKnown RBP16.15■□□□□ 0.18
RUNX1-213ENST00000469087 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
RUNX1-213ENST00000469087 MAP3K15Q6ZN16 1313 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
RUNX1-213ENST00000469087 GNAI3P08754 354 aa16.14■□□□□ 0.17
RUNX1-213ENST00000469087 TXNRD1Q16881 649 aa16.14■□□□□ 0.17
RUNX1-213ENST00000469087 SLC27A3Q5K4L6 730 aa16.14■□□□□ 0.17
RUNX1-213ENST00000469087 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
RUNX1-213ENST00000469087 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
RUNX1-213ENST00000469087 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
RUNX1-213ENST00000469087 GCKRQ14397 625 aa16.13■□□□□ 0.17
RUNX1-213ENST00000469087 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
RUNX1-213ENST00000469087 SIRT2Q8IXJ6 389 aa16.13■□□□□ 0.17
RUNX1-213ENST00000469087 KDM2BQ8NHM5 1336 aa16.13■□□□□ 0.17
RUNX1-213ENST00000469087 ERVV-1B6SEH8 477 aa16.12■□□□□ 0.17
RUNX1-213ENST00000469087 GNAI2P04899 355 aa16.12■□□□□ 0.17
RUNX1-213ENST00000469087 AMIGO3Q86WK7 504 aa16.12■□□□□ 0.17
RUNX1-213ENST00000469087 RWDD1Q9H446 243 aaPredicted RBP16.12■□□□□ 0.17
RUNX1-213ENST00000469087 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
RUNX1-213ENST00000469087 GRM8O00222 908 aa16.11■□□□□ 0.17
RUNX1-213ENST00000469087 GNPATO15228 680 aa16.11■□□□□ 0.17
RUNX1-213ENST00000469087 UBTFL1P0CB47 393 aaPredicted RBP16.11■□□□□ 0.17
RUNX1-213ENST00000469087 ISCA1Q9BUE6 129 aa16.11■□□□□ 0.17
RUNX1-213ENST00000469087 COL15A1P39059 1388 aa16.11■□□□□ 0.17
RUNX1-213ENST00000469087 UTYO14607 1347 aa16.11■□□□□ 0.17
RUNX1-213ENST00000469087 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 LRRFIP2Q9Y608 721 aaKnown RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
RUNX1-213ENST00000469087 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 NUP98P52948 1817 aa16.1■□□□□ 0.17
RUNX1-213ENST00000469087 TNS1Q9HBL0 1735 aaKnown RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
RUNX1-213ENST00000469087 CEP85Q6P2H3 762 aa16.1■□□□□ 0.17
RUNX1-213ENST00000469087 RPAP2Q8IXW5 612 aaPredicted RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
RUNX1-213ENST00000469087 AFDNP55196 1824 aaKnown RBP16.09■□□□□ 0.17
RUNX1-213ENST00000469087 TRIM28Q13263 835 aaKnown RBP16.09■□□□□ 0.17
RUNX1-213ENST00000469087 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
RUNX1-213ENST00000469087 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
RUNX1-213ENST00000469087 CCDC191Q8NCU4 936 aa16.09■□□□□ 0.17
RUNX1-213ENST00000469087 JARID2Q92833 1246 aaPredicted RBP16.09■□□□□ 0.17
RUNX1-213ENST00000469087 A0A087WZG4 1122 aa16.08■□□□□ 0.17
RUNX1-213ENST00000469087 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.17
RUNX1-213ENST00000469087 AK7Q96M32 723 aa16.08■□□□□ 0.17
RUNX1-213ENST00000469087 CWC25Q9NXE8 425 aaPredicted RBP16.08■□□□□ 0.17
RUNX1-213ENST00000469087 H7C1W4 665 aa16.08■□□□□ 0.16
RUNX1-213ENST00000469087 KAZALD1Q96I82 304 aa16.08■□□□□ 0.16
RUNX1-213ENST00000469087 GPTP24298 496 aa16.07■□□□□ 0.16
RUNX1-213ENST00000469087 ATP8B2P98198 1209 aa16.07■□□□□ 0.16
RUNX1-213ENST00000469087 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
RUNX1-213ENST00000469087 ZNF34Q8IZ26 560 aa16.07■□□□□ 0.16
RUNX1-213ENST00000469087 SUCLG2Q96I99 432 aa16.07■□□□□ 0.16
RUNX1-213ENST00000469087 CASP7P55210 303 aa16.06■□□□□ 0.16
RUNX1-213ENST00000469087 TRAPPC3LQ5T215 181 aa16.06■□□□□ 0.16
RUNX1-213ENST00000469087 UBE3BQ7Z3V4 1068 aa16.06■□□□□ 0.16
RUNX1-213ENST00000469087 PNMA6EA0A0J9YXQ4 647 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 PHF14O94880 888 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
RUNX1-213ENST00000469087 RTL5Q5HYW3 569 aaPredicted RBP16.05■□□□□ 0.16
RUNX1-213ENST00000469087 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 EZH2Q15910 746 aaKnown RBP16.05■□□□□ 0.16
RUNX1-213ENST00000469087 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
RUNX1-213ENST00000469087 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
RUNX1-213ENST00000469087 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
RUNX1-213ENST00000469087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.04■□□□□ 0.16
RUNX1-213ENST00000469087 HMGB2P26583 209 aaKnown RBP16.04■□□□□ 0.16
RUNX1-213ENST00000469087 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms