RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 RTF1Q92541 710 aaKnown RBP11.21□□□□□ -0.61
SYN3-210ENST00000468922 ZNF496Q96IT1 587 aaPredicted RBP11.21□□□□□ -0.61
SYN3-210ENST00000468922 SERPINB2P05120 415 aa11.2□□□□□ -0.62
SYN3-210ENST00000468922 DCTN1Q14203 1278 aa11.2□□□□□ -0.62
SYN3-210ENST00000468922 NFIXQ14938 502 aa11.2□□□□□ -0.62
SYN3-210ENST00000468922 MCM10Q7L590 875 aa11.2□□□□□ -0.62
SYN3-210ENST00000468922 SOS1Q07889 1333 aaPredicted RBP11.19□□□□□ -0.62
SYN3-210ENST00000468922 WDR33Q9C0J8 1336 aaKnown RBP11.19□□□□□ -0.62
SYN3-210ENST00000468922 BTBD11A6QL63 1104 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 KCNQ3O43525 872 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 C21orf2O43822 256 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 ITGBL1O95965 494 aaPredicted RBP11.19□□□□□ -0.62
SYN3-210ENST00000468922 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYN3-210ENST00000468922 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 FMNL2Q96PY5 1086 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 TEX13AQ9BXU3 409 aaPredicted RBP11.19□□□□□ -0.62
SYN3-210ENST00000468922 ZNF219Q9P2Y4 722 aaPredicted RBP11.19□□□□□ -0.62
SYN3-210ENST00000468922 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
SYN3-210ENST00000468922 MAPK8IP3Q9UPT6 1336 aa11.18□□□□□ -0.62
SYN3-210ENST00000468922 RASSF10A6NK89 507 aa11.18□□□□□ -0.62
SYN3-210ENST00000468922 TAF7Q15545 349 aaPredicted RBP11.18□□□□□ -0.62
SYN3-210ENST00000468922 BEGAINQ9BUH8 593 aa11.18□□□□□ -0.62
SYN3-210ENST00000468922 TAF1DQ9H5J8 278 aaPredicted RBP11.18□□□□□ -0.62
SYN3-210ENST00000468922 NARFQ9UHQ1 456 aa11.18□□□□□ -0.62
SYN3-210ENST00000468922 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
SYN3-210ENST00000468922 STARD3NLO95772 234 aa11.17□□□□□ -0.62
SYN3-210ENST00000468922 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
SYN3-210ENST00000468922 TAOK3Q9H2K8 898 aa11.17□□□□□ -0.62
SYN3-210ENST00000468922 ADAMTS8Q9UP79 889 aa11.17□□□□□ -0.62
SYN3-210ENST00000468922 ZBTB1Q9Y2K1 713 aa11.17□□□□□ -0.62
SYN3-210ENST00000468922 KDM3BQ7LBC6 1761 aa11.16□□□□□ -0.62
SYN3-210ENST00000468922 LTBP3Q9NS15 1303 aa11.16□□□□□ -0.62
SYN3-210ENST00000468922 PDE6BP35913 854 aa11.16□□□□□ -0.62
SYN3-210ENST00000468922 TMPOP42166 694 aaKnown RBP11.16□□□□□ -0.62
SYN3-210ENST00000468922 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
SYN3-210ENST00000468922 PNISRQ8TF01 805 aaKnown RBP11.16□□□□□ -0.62
SYN3-210ENST00000468922 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
SYN3-210ENST00000468922 RIPK4P57078 832 aa11.15□□□□□ -0.62
SYN3-210ENST00000468922 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYN3-210ENST00000468922 CNTROBQ8N137 903 aa11.15□□□□□ -0.62
SYN3-210ENST00000468922 RUNDC1Q96C34 613 aa11.15□□□□□ -0.62
SYN3-210ENST00000468922 L3MBTL3Q96JM7 780 aaPredicted RBP11.15□□□□□ -0.62
SYN3-210ENST00000468922 TIAM2Q8IVF5 1701 aa11.15□□□□□ -0.63
SYN3-210ENST00000468922 COL15A1P39059 1388 aa11.15□□□□□ -0.63
SYN3-210ENST00000468922 SNRPA1P09661 255 aaKnown RBP11.14□□□□□ -0.63
SYN3-210ENST00000468922 IL6STP40189 918 aaPredicted RBP11.14□□□□□ -0.63
SYN3-210ENST00000468922 BICDL1Q6ZP65 573 aa11.14□□□□□ -0.63
SYN3-210ENST00000468922 THUMPD2Q9BTF0 503 aaKnown RBP11.14□□□□□ -0.63
SYN3-210ENST00000468922 BRIP1Q9BX63 1249 aa11.14□□□□□ -0.63
SYN3-210ENST00000468922 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
SYN3-210ENST00000468922 HACL1Q9UJ83 578 aa11.14□□□□□ -0.63
SYN3-210ENST00000468922 USP16Q9Y5T5 823 aa11.14□□□□□ -0.63
SYN3-210ENST00000468922 A1BGP04217 495 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
SYN3-210ENST00000468922 EPHX2P34913 555 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 ECE1P42892 770 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 LMOD3Q0VAK6 560 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
SYN3-210ENST00000468922 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
SYN3-210ENST00000468922 PNMA8AQ86V59 439 aaPredicted RBP11.13□□□□□ -0.63
SYN3-210ENST00000468922 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
SYN3-210ENST00000468922 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 CARMIL3Q8ND23 1372 aa11.13□□□□□ -0.63
SYN3-210ENST00000468922 A0A087WZG4 1122 aa11.12□□□□□ -0.63
SYN3-210ENST00000468922 PRAMEF22A3QJZ6 481 aa11.12□□□□□ -0.63
SYN3-210ENST00000468922 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
SYN3-210ENST00000468922 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
SYN3-210ENST00000468922 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
SYN3-210ENST00000468922 GRM1Q13255 1194 aa11.11□□□□□ -0.63
SYN3-210ENST00000468922 CAPNS2Q96L46 248 aa11.11□□□□□ -0.63
SYN3-210ENST00000468922 MCOLN1Q9GZU1 580 aa11.11□□□□□ -0.63
SYN3-210ENST00000468922 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
SYN3-210ENST00000468922 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 ANP32CO43423 234 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 STYK1Q6J9G0 422 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 CYP4F22Q6NT55 531 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 PRPF40BQ6NWY9 871 aaKnown RBP11.1□□□□□ -0.63
SYN3-210ENST00000468922 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
SYN3-210ENST00000468922 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 DDX21Q9NR30 783 aaKnown RBP eCLIP11.1□□□□□ -0.63
SYN3-210ENST00000468922 TSKSQ9UJT2 592 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 RRP7AQ9Y3A4 280 aaKnown RBP11.1□□□□□ -0.63
SYN3-210ENST00000468922 SCN7AQ01118 1682 aa11.1□□□□□ -0.63
SYN3-210ENST00000468922 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 CHL1O00533 1208 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 NPHP1O15259 732 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 MAP2K2P36507 400 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 TBC1D9BQ66K14 1250 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
SYN3-210ENST00000468922 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
SYN3-210ENST00000468922 APAF1O14727 1248 aa11.08□□□□□ -0.64
SYN3-210ENST00000468922 RGL2O15211 777 aa11.08□□□□□ -0.64
SYN3-210ENST00000468922 CA12O43570 354 aa11.08□□□□□ -0.64
SYN3-210ENST00000468922 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms