RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
TRIM46-207ENST00000468878 LMBRD1Q9NUN5 540 aa20.99■□□□□ 0.95
TRIM46-207ENST00000468878 ESPNB1AK53 854 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 GRM8O00222 908 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 AK2P54819 239 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 HSP90AB4PQ58FF6 505 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 KIF24Q5T7B8 1368 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 HSP90B1P14625 803 aaKnown RBP20.98■□□□□ 0.95
TRIM46-207ENST00000468878 ECHDC1Q9NTX5 307 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 DIP2AQ14689 1571 aa20.98■□□□□ 0.95
TRIM46-207ENST00000468878 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.98■□□□□ 0.95
TRIM46-207ENST00000468878 RAB11FIP3O75154 756 aa20.97■□□□□ 0.95
TRIM46-207ENST00000468878 GADD45BO75293 160 aaPredicted RBP20.97■□□□□ 0.95
TRIM46-207ENST00000468878 GLRX3O76003 335 aaKnown RBP20.97■□□□□ 0.95
TRIM46-207ENST00000468878 LRRC2Q9BYS8 371 aa20.97■□□□□ 0.95
TRIM46-207ENST00000468878 KDM4AO75164 1064 aa20.97■□□□□ 0.95
TRIM46-207ENST00000468878 FAM173BQ6P4H8 233 aa20.97■□□□□ 0.95
TRIM46-207ENST00000468878 GPT2Q8TD30 523 aa20.97■□□□□ 0.95
TRIM46-207ENST00000468878 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
TRIM46-207ENST00000468878 VIRMAQ69YN4 1812 aaKnown RBP20.96■□□□□ 0.95
TRIM46-207ENST00000468878 ADCK5Q3MIX3 580 aa20.96■□□□□ 0.95
TRIM46-207ENST00000468878 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
TRIM46-207ENST00000468878 A0A087WZG4 1122 aa20.96■□□□□ 0.95
TRIM46-207ENST00000468878 RBSNQ9H1K0 784 aa20.96■□□□□ 0.95
TRIM46-207ENST00000468878 PRDM11Q9NQV5 511 aa20.96■□□□□ 0.95
TRIM46-207ENST00000468878 RUFY2Q8WXA3 655 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
TRIM46-207ENST00000468878 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 CNPY2Q9Y2B0 182 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 SNX14Q9Y5W7 946 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 FAM177BA6PVY3 158 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 OSBPL3Q9H4L5 887 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 KNDC1Q76NI1 1749 aa20.95■□□□□ 0.94
TRIM46-207ENST00000468878 CEBPZQ03701 1054 aaKnown RBP20.94■□□□□ 0.94
TRIM46-207ENST00000468878 PDRG1Q9NUG6 133 aa20.94■□□□□ 0.94
TRIM46-207ENST00000468878 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
TRIM46-207ENST00000468878 SLFNL1Q499Z3 407 aa20.94■□□□□ 0.94
TRIM46-207ENST00000468878 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
TRIM46-207ENST00000468878 PTMSP20962 102 aa20.94■□□□□ 0.94
TRIM46-207ENST00000468878 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
TRIM46-207ENST00000468878 C3P01024 1663 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 SGSM2O43147 1006 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 EVA1CP58658 441 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 CCDC129Q6ZRS4 1044 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 ANKRD13DQ6ZTN6 518 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 SSH2Q76I76 1423 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 NMIQ13287 307 aaPredicted RBP20.93■□□□□ 0.94
TRIM46-207ENST00000468878 HYPKQ9NX55 129 aa20.93■□□□□ 0.94
TRIM46-207ENST00000468878 DNTTIP2Q5QJE6 756 aaKnown RBP20.92■□□□□ 0.94
TRIM46-207ENST00000468878 DDX11Q96FC9 970 aa20.92■□□□□ 0.94
TRIM46-207ENST00000468878 LARGE1O95461 756 aa20.92■□□□□ 0.94
TRIM46-207ENST00000468878 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
TRIM46-207ENST00000468878 GORABQ5T7V8 394 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 ERBB4Q15303 1308 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 USP48Q86UV5 1035 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 CYP46A1Q9Y6A2 500 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 SNRKQ9NRH2 765 aa20.91■□□□□ 0.94
TRIM46-207ENST00000468878 ADCY9O60503 1353 aa20.9■□□□□ 0.94
TRIM46-207ENST00000468878 SETD1AO15047 1707 aaKnown RBP20.9■□□□□ 0.94
TRIM46-207ENST00000468878 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
TRIM46-207ENST00000468878 RBM8AQ9Y5S9 174 aaKnown RBP20.9■□□□□ 0.94
TRIM46-207ENST00000468878 GOLGA6L4A6NEF3 574 aa20.9■□□□□ 0.94
TRIM46-207ENST00000468878 MCM2P49736 904 aa20.9■□□□□ 0.94
TRIM46-207ENST00000468878 LARP1Q6PKG0 1096 aaKnown RBP20.9■□□□□ 0.94
TRIM46-207ENST00000468878 MON2Q7Z3U7 1717 aa20.9■□□□□ 0.94
TRIM46-207ENST00000468878 FBXW7Q969H0 707 aa20.89■□□□□ 0.94
TRIM46-207ENST00000468878 SEC62Q99442 399 aaKnown RBP20.89■□□□□ 0.94
TRIM46-207ENST00000468878 DDX21Q9NR30 783 aaKnown RBP eCLIP20.89■□□□□ 0.94
TRIM46-207ENST00000468878 TFIP11Q9UBB9 837 aaKnown RBP20.89■□□□□ 0.94
TRIM46-207ENST00000468878 RRP9O43818 475 aaKnown RBP20.89■□□□□ 0.93
TRIM46-207ENST00000468878 A1BGP04217 495 aa20.89■□□□□ 0.93
TRIM46-207ENST00000468878 GJB2P29033 226 aa20.89■□□□□ 0.93
TRIM46-207ENST00000468878 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
TRIM46-207ENST00000468878 TFCP2Q12800 502 aa20.89■□□□□ 0.93
TRIM46-207ENST00000468878 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.93
TRIM46-207ENST00000468878 CLCN1P35523 988 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 LMBR1LQ6UX01 489 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
TRIM46-207ENST00000468878 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 SASH1O94885 1247 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 HSPA4P34932 840 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 TIMM10P62072 90 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 HSP90AB3PQ58FF7 597 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 STAP2Q9UGK3 403 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 NRKQ7Z2Y5 1582 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 CAMK4Q16566 473 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 TAF7LQ5H9L4 462 aa20.88■□□□□ 0.93
TRIM46-207ENST00000468878 BCL11BQ9C0K0 894 aaPredicted RBP20.88■□□□□ 0.93
TRIM46-207ENST00000468878 IGKV5-2P06315 115 aa20.87■□□□□ 0.93
TRIM46-207ENST00000468878 A0A0D9SFI3 127 aa20.87■□□□□ 0.93
TRIM46-207ENST00000468878 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
TRIM46-207ENST00000468878 RUFY3Q7L099 469 aa20.86■□□□□ 0.93
TRIM46-207ENST00000468878 CHST3Q7LGC8 479 aa20.86■□□□□ 0.93
TRIM46-207ENST00000468878 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
TRIM46-207ENST00000468878 WDR33Q9C0J8 1336 aaKnown RBP20.86■□□□□ 0.93
TRIM46-207ENST00000468878 SYT1P21579 422 aa20.86■□□□□ 0.93
TRIM46-207ENST00000468878 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms