RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 BRF1Q92994 677 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 GTPBP4Q9BZE4 634 aaKnown RBP12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 PIK3C2GO75747 1445 aa12.36□□□□□ -0.43
TRAPPC10-207ENST00000468864 HSP90AB2PQ58FF8 381 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 CCDC47Q96A33 483 aaKnown RBP12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 CHMLP26374 656 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 MCM6Q14566 821 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 PLEKHO1Q53GL0 409 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 BCL2L12Q9HB09 334 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 TRIM35Q9UPQ4 493 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 PTPRCP08575 1304 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 RDXP35241 583 aaKnown RBP12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 STX1AQ16623 288 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 JAKMIP3Q5VZ66 844 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 AOPEPQ8N6M6 819 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 ZMYM4Q5VZL5 1548 aa12.35□□□□□ -0.43
TRAPPC10-207ENST00000468864 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 CASQ1P31415 396 aa12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 HAND2P61296 217 aa12.34□□□□□ -0.43
TRAPPC10-207ENST00000468864 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 CCDC69A6NI79 296 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 ZSCAN12O43309 604 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 NEMFO60524 1076 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 ANAPC15P60006 121 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 VPS37DQ86XT2 251 aa12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.43
TRAPPC10-207ENST00000468864 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 FBXO31Q5XUX0 539 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 KDM5DQ9BY66 1539 aa12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 BLMP54132 1417 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 SLU7O95391 586 aaKnown RBP12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 GSDMDP57764 484 aa12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 SYT10Q6XYQ8 523 aa12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 G2E3Q7L622 706 aa12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 PA2G4Q9UQ80 394 aaKnown RBP12.33□□□□□ -0.44
TRAPPC10-207ENST00000468864 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 CTAGE5O15320 804 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 FOXO3O43524 673 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 XBP1P17861 261 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 LIG1P18858 919 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 ZNF500O60304 480 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 SART3Q15020 963 aaKnown RBP12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 CRACR2AQ9BSW2 395 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 SNRKQ9NRH2 765 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
TRAPPC10-207ENST00000468864 PHACTR2O75167 634 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 KIAA0754O94854 1291 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 LRMPQ12912 555 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 TRIM22Q8IYM9 498 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 GPATCH11Q8N954 259 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 TBC1D2BQ9UPU7 963 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 DNA2P51530 1060 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 ZNHIT6Q9NWK9 470 aaKnown RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 TERF1P54274 439 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 DHX8Q14562 1220 aaKnown RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
TRAPPC10-207ENST00000468864 CCDC171Q6TFL3 1326 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 KIF5CO60282 957 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 CCDC181Q5TID7 509 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 CHST3Q7LGC8 479 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 MAGEC2Q9UBF1 373 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 PALD1Q9ULE6 856 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 ZNF521Q96K83 1311 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 ZNF397Q8NF99 534 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 FEZ1Q99689 392 aa12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 ORC3Q9UBD5 711 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC10-207ENST00000468864 UBASH3AP57075 661 aa12.29□□□□□ -0.44
TRAPPC10-207ENST00000468864 ELF2Q15723 593 aa12.29□□□□□ -0.44
TRAPPC10-207ENST00000468864 ARFGAP3Q9NP61 516 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms