RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 CLEC4GQ6UXB4 293 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 RIC3Q7Z5B4 369 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 XAGE3Q8WTP9 111 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 UPF1Q92900 1129 aaKnown RBP eCLIP9.08□□□□□ -0.96
NXF3-204ENST00000468528 HDAC5Q9UQL6 1122 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 COL15A1P39059 1388 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 PXDNLA1KZ92 1463 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 PI4KAP2A4QPH2 592 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 EZH2Q15910 746 aaKnown RBP9.07□□□□□ -0.96
NXF3-204ENST00000468528 ERICH6BQ5W0A0 696 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 INTS3Q68E01 1043 aaKnown RBP9.07□□□□□ -0.96
NXF3-204ENST00000468528 G2E3Q7L622 706 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 DZIP3Q86Y13 1208 aaKnown RBP9.07□□□□□ -0.96
NXF3-204ENST00000468528 PI4KAP1Q8N8J0 262 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
NXF3-204ENST00000468528 STK32BQ9NY57 414 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 TFCP2L1Q9NZI6 479 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 C4BP0C0L5 1744 aa9.07□□□□□ -0.96
NXF3-204ENST00000468528 ABCC4O15439 1325 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 MAP3K15Q6ZN16 1313 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 ATP10DQ9P241 1426 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 ZPR1O75312 459 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 ALDH1L1O75891 902 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 ANXA1P04083 346 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 RFC4P35249 363 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 KCNQ4P56696 695 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 AIMP1Q12904 312 aaKnown RBP9.06□□□□□ -0.96
NXF3-204ENST00000468528 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
NXF3-204ENST00000468528 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
NXF3-204ENST00000468528 LINS1Q8NG48 757 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 METTL22Q9BUU2 404 aaPredicted RBP9.06□□□□□ -0.96
NXF3-204ENST00000468528 NARFQ9UHQ1 456 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 DDX19BQ9UMR2 479 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 MAP3K2Q9Y2U5 619 aa9.06□□□□□ -0.96
NXF3-204ENST00000468528 ZNF330Q9Y3S2 320 aaPredicted RBP9.06□□□□□ -0.96
NXF3-204ENST00000468528 ADCY9O60503 1353 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.05□□□□□ -0.96
NXF3-204ENST00000468528 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
NXF3-204ENST00000468528 SLC15A2Q16348 729 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 TTLL7Q6ZT98 887 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 DEFB132Q7Z7B7 95 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 CCDC191Q8NCU4 936 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 ARXQ96QS3 562 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 SRCIN1Q9C0H9 1055 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
NXF3-204ENST00000468528 PIP4K2AP48426 406 aaPredicted RBP9.04□□□□□ -0.96
NXF3-204ENST00000468528 TCIRG1Q13488 830 aa9.04□□□□□ -0.96
NXF3-204ENST00000468528 MVPQ14764 893 aaKnown RBP9.04□□□□□ -0.96
NXF3-204ENST00000468528 PARP10Q53GL7 1025 aa9.04□□□□□ -0.96
NXF3-204ENST00000468528 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
NXF3-204ENST00000468528 ARHGEF1Q92888 912 aaKnown RBP9.04□□□□□ -0.96
NXF3-204ENST00000468528 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
NXF3-204ENST00000468528 USP42Q9H9J4 1324 aaKnown RBP9.04□□□□□ -0.96
NXF3-204ENST00000468528 MYH14Q7Z406 1995 aaKnown RBP9.03□□□□□ -0.96
NXF3-204ENST00000468528 F6X3S4 739 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 PLIN1O60240 522 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 GNAI3P08754 354 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 BEND3Q5T5X7 828 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 SLC4A10Q6U841 1118 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 ITPRIPQ8IWB1 547 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
NXF3-204ENST00000468528 NEURL1BA8MQ27 555 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 ZNF827Q17R98 1081 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 ILDR2Q71H61 639 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 TMEM57Q8N5G2 664 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 PANK1Q8TE04 598 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 ISCA1Q9BUE6 129 aa9.02□□□□□ -0.97
NXF3-204ENST00000468528 CWC25Q9NXE8 425 aaPredicted RBP9.02□□□□□ -0.97
NXF3-204ENST00000468528 C9orf78Q9NZ63 289 aaPredicted RBP9.02□□□□□ -0.97
NXF3-204ENST00000468528 PHF14O94880 888 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 RLBP1P12271 317 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 GCKRQ14397 625 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 SETDB2Q96T68 719 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 MYD88Q99836 296 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 NYXQ9GZU5 481 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 UTYO14607 1347 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 PNPLA7Q6ZV29 1317 aa9.01□□□□□ -0.97
NXF3-204ENST00000468528 UBR3Q6ZT12 1888 aa9□□□□□ -0.97
NXF3-204ENST00000468528 GRM8O00222 908 aa9□□□□□ -0.97
NXF3-204ENST00000468528 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
NXF3-204ENST00000468528 MSH5O43196 834 aa9□□□□□ -0.97
NXF3-204ENST00000468528 IGKV5-2P06315 115 aa9□□□□□ -0.97
NXF3-204ENST00000468528 GYS1P13807 737 aa9□□□□□ -0.97
NXF3-204ENST00000468528 HOXD11P31277 338 aaPredicted RBP9□□□□□ -0.97
NXF3-204ENST00000468528 HLFQ16534 295 aa9□□□□□ -0.97
NXF3-204ENST00000468528 C20orf194Q5TEA3 1177 aa9□□□□□ -0.97
NXF3-204ENST00000468528 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
NXF3-204ENST00000468528 NLRP10Q86W26 655 aa9□□□□□ -0.97
NXF3-204ENST00000468528 COL23A1Q86Y22 540 aaPredicted RBP9□□□□□ -0.97
NXF3-204ENST00000468528 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
NXF3-204ENST00000468528 ANO8Q9HCE9 1232 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms