RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 HSP90B1P14625 803 aaKnown RBP10.41□□□□□ -0.74
BRCA1-208ENST00000468300 CEP85Q6P2H3 762 aa10.41□□□□□ -0.74
BRCA1-208ENST00000468300 MAP3K2Q9Y2U5 619 aa10.41□□□□□ -0.74
BRCA1-208ENST00000468300 XAGE3Q8WTP9 111 aa10.41□□□□□ -0.74
BRCA1-208ENST00000468300 ACSBG1Q96GR2 724 aa10.41□□□□□ -0.74
BRCA1-208ENST00000468300 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-208ENST00000468300 MYH14Q7Z406 1995 aaKnown RBP10.41□□□□□ -0.74
BRCA1-208ENST00000468300 IGKV5-2P06315 115 aa10.4□□□□□ -0.74
BRCA1-208ENST00000468300 COPS6Q7L5N1 327 aa10.4□□□□□ -0.74
BRCA1-208ENST00000468300 ERBB4Q15303 1308 aa10.4□□□□□ -0.74
BRCA1-208ENST00000468300 LY75O60449 1722 aa10.4□□□□□ -0.74
BRCA1-208ENST00000468300 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
BRCA1-208ENST00000468300 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-208ENST00000468300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCA1-208ENST00000468300 DNAJC10Q8IXB1 793 aa10.39□□□□□ -0.75
BRCA1-208ENST00000468300 NBPF7P0C2Y1 421 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-208ENST00000468300 CYP19A1P11511 503 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-208ENST00000468300 MEX3CQ5U5Q3 659 aaKnown RBP10.39□□□□□ -0.75
BRCA1-208ENST00000468300 PDZRN3Q9UPQ7 1066 aa10.39□□□□□ -0.75
BRCA1-208ENST00000468300 UTYO14607 1347 aa10.39□□□□□ -0.75
BRCA1-208ENST00000468300 PDE4AP27815 886 aa10.39□□□□□ -0.75
BRCA1-208ENST00000468300 AIMP1Q12904 312 aaKnown RBP10.39□□□□□ -0.75
BRCA1-208ENST00000468300 CWF19L2Q2TBE0 894 aaKnown RBP10.38□□□□□ -0.75
BRCA1-208ENST00000468300 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
BRCA1-208ENST00000468300 KAT6BQ8WYB5 2073 aa10.38□□□□□ -0.75
BRCA1-208ENST00000468300 TTLL7Q6ZT98 887 aa10.38□□□□□ -0.75
BRCA1-208ENST00000468300 SRCIN1Q9C0H9 1055 aa10.38□□□□□ -0.75
BRCA1-208ENST00000468300 TRPC5Q9UL62 973 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-208ENST00000468300 FAM182BQ5T319 152 aa10.38□□□□□ -0.75
BRCA1-208ENST00000468300 SYTL4Q96C24 671 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-208ENST00000468300 KAZALD1Q96I82 304 aa10.38□□□□□ -0.75
BRCA1-208ENST00000468300 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 NUCB1Q02818 461 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 METTL22Q9BUU2 404 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-208ENST00000468300 PNMA6EA0A0J9YXQ4 647 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 ITPK1Q13572 414 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 ANKRD13DQ6ZTN6 518 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-208ENST00000468300 DCTPP1Q9H773 170 aa10.37□□□□□ -0.75
BRCA1-208ENST00000468300 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
BRCA1-208ENST00000468300 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
BRCA1-208ENST00000468300 LRRFIP2Q9Y608 721 aaKnown RBP10.36□□□□□ -0.75
BRCA1-208ENST00000468300 NUP98P52948 1817 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 NEURL1BA8MQ27 555 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 ALDH1L1O75891 902 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 INTS5Q6P9B9 1019 aaKnown RBP10.36□□□□□ -0.75
BRCA1-208ENST00000468300 LINS1Q8NG48 757 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 PLBD2Q8NHP8 589 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 PALLDQ8WX93 1383 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 GNAI2P04899 355 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 SEPT12Q8IYM1 358 aa10.36□□□□□ -0.75
BRCA1-208ENST00000468300 GNAI3P08754 354 aa10.35□□□□□ -0.75
BRCA1-208ENST00000468300 TUBGCP6Q96RT7 1819 aa10.35□□□□□ -0.75
BRCA1-208ENST00000468300 BCORQ6W2J9 1755 aa10.35□□□□□ -0.75
BRCA1-208ENST00000468300 CASP7P55210 303 aa10.35□□□□□ -0.75
BRCA1-208ENST00000468300 ATP8B2P98198 1209 aa10.35□□□□□ -0.75
BRCA1-208ENST00000468300 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-208ENST00000468300 LOC102724428A0A0B4J2F2 783 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
BRCA1-208ENST00000468300 SIK1P57059 783 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 POLA2Q14181 598 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 GCC1Q96CN9 775 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 GCKRQ14397 625 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 MYD88Q99836 296 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 ZBTB1Q9Y2K1 713 aa10.34□□□□□ -0.75
BRCA1-208ENST00000468300 RGS17Q9UGC6 210 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-208ENST00000468300 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-208ENST00000468300 RGS3P49796 1198 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 SSH3Q8TE77 659 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 MTX1Q13505 466 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 C8orf34Q49A92 452 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 CHD1LQ86WJ1 897 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 SUCLG2Q96I99 432 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 COL15A1P39059 1388 aa10.33□□□□□ -0.76
BRCA1-208ENST00000468300 GRM8O00222 908 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 STARD3NLO95772 234 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 EPHA10Q5JZY3 1008 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
BRCA1-208ENST00000468300 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
BRCA1-208ENST00000468300 LINC00116Q8NCU8 138 aa10.32□□□□□ -0.76
BRCA1-208ENST00000468300 KCNQ4P56696 695 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 HLFQ16534 295 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 PPP1R42Q7Z4L9 355 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 ISCA1Q9BUE6 129 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 BACH2Q9BYV9 841 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 LNPKQ9C0E8 428 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 H7C1W4 665 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-208ENST00000468300 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
BRCA1-208ENST00000468300 C16orf71Q8IYS4 520 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-208ENST00000468300 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-208ENST00000468300 SCN7AQ01118 1682 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 MAP3K15Q6ZN16 1313 aa10.3□□□□□ -0.76
BRCA1-208ENST00000468300 C4AP0C0L4 1744 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms