RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 WDR4P57081 412 aaKnown RBP13.86□□□□□ -0.19
CKAP2-205ENST00000468284 ARID5BQ14865 1188 aa13.86□□□□□ -0.19
CKAP2-205ENST00000468284 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
CKAP2-205ENST00000468284 FAM182BQ5T319 152 aa13.86□□□□□ -0.19
CKAP2-205ENST00000468284 CDK15Q96Q40 435 aa13.86□□□□□ -0.19
CKAP2-205ENST00000468284 TIMP2P16035 220 aa13.85□□□□□ -0.19
CKAP2-205ENST00000468284 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
CKAP2-205ENST00000468284 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
CKAP2-205ENST00000468284 IQGAP3Q86VI3 1631 aa13.85□□□□□ -0.19
CKAP2-205ENST00000468284 BPHLQ86WA6 291 aaPredicted RBP13.84□□□□□ -0.19
CKAP2-205ENST00000468284 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
CKAP2-205ENST00000468284 NXF1Q9UBU9 619 aaKnown RBP13.84□□□□□ -0.19
CKAP2-205ENST00000468284 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
CKAP2-205ENST00000468284 C4orf48Q5BLP8 95 aa13.83□□□□□ -0.2
CKAP2-205ENST00000468284 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
CKAP2-205ENST00000468284 ARMC2Q8NEN0 867 aa13.83□□□□□ -0.2
CKAP2-205ENST00000468284 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
CKAP2-205ENST00000468284 INSM1Q01101 510 aaPredicted RBP13.82□□□□□ -0.2
CKAP2-205ENST00000468284 VPS72Q15906 364 aa13.82□□□□□ -0.2
CKAP2-205ENST00000468284 EZH2Q15910 746 aaKnown RBP13.82□□□□□ -0.2
CKAP2-205ENST00000468284 MRPL14Q6P1L8 145 aaKnown RBP13.82□□□□□ -0.2
CKAP2-205ENST00000468284 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
CKAP2-205ENST00000468284 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
CKAP2-205ENST00000468284 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
CKAP2-205ENST00000468284 KLF16Q9BXK1 252 aaPredicted RBP13.81□□□□□ -0.2
CKAP2-205ENST00000468284 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
CKAP2-205ENST00000468284 SCARF1Q14162 830 aa13.8□□□□□ -0.2
CKAP2-205ENST00000468284 POLR3EQ9NVU0 708 aa13.8□□□□□ -0.2
CKAP2-205ENST00000468284 NR5A1Q13285 461 aa13.79□□□□□ -0.2
CKAP2-205ENST00000468284 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
CKAP2-205ENST00000468284 NBPF14Q5TI25 921 aa13.79□□□□□ -0.2
CKAP2-205ENST00000468284 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
CKAP2-205ENST00000468284 PURBQ96QR8 312 aaKnown RBP13.78□□□□□ -0.2
CKAP2-205ENST00000468284 SPATA31A3Q5VYP0 1347 aa13.78□□□□□ -0.2
CKAP2-205ENST00000468284 ZIC2O95409 532 aaPredicted RBP13.77□□□□□ -0.21
CKAP2-205ENST00000468284 NR3C2P08235 984 aa13.77□□□□□ -0.21
CKAP2-205ENST00000468284 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
CKAP2-205ENST00000468284 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
CKAP2-205ENST00000468284 NUP155O75694 1391 aa13.76□□□□□ -0.21
CKAP2-205ENST00000468284 NPAS3Q8IXF0 933 aa13.76□□□□□ -0.21
CKAP2-205ENST00000468284 ZFAND3Q9H8U3 227 aa13.76□□□□□ -0.21
CKAP2-205ENST00000468284 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
CKAP2-205ENST00000468284 CAMTA1Q9Y6Y1 1673 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 GRM5P41594 1212 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 SH3RF1Q7Z6J0 888 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 ITPKCQ96DU7 683 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 C1QTNF2Q9BXJ5 285 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 CLTCL1P53675 1640 aa13.75□□□□□ -0.21
CKAP2-205ENST00000468284 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
CKAP2-205ENST00000468284 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
CKAP2-205ENST00000468284 VEGFBP49765 207 aa13.74□□□□□ -0.21
CKAP2-205ENST00000468284 CAMKK2Q96RR4 588 aa13.74□□□□□ -0.21
CKAP2-205ENST00000468284 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
CKAP2-205ENST00000468284 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 IRF7Q92985 503 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 NWD2Q9ULI1 1742 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
CKAP2-205ENST00000468284 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
CKAP2-205ENST00000468284 MAGEB6P1A0A0J9YX57 407 aa13.72□□□□□ -0.21
CKAP2-205ENST00000468284 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
CKAP2-205ENST00000468284 NAIPQ13075 1403 aa13.72□□□□□ -0.21
CKAP2-205ENST00000468284 PRAG1Q86YV5 1406 aa13.72□□□□□ -0.21
CKAP2-205ENST00000468284 NRAPQ86VF7 1730 aa13.71□□□□□ -0.21
CKAP2-205ENST00000468284 H3BM21 787 aa13.71□□□□□ -0.21
CKAP2-205ENST00000468284 FSHRP23945 695 aa13.71□□□□□ -0.21
CKAP2-205ENST00000468284 ZNF784Q8NCA9 323 aaPredicted RBP13.71□□□□□ -0.21
CKAP2-205ENST00000468284 MAP4K5Q9Y4K4 846 aa13.71□□□□□ -0.21
CKAP2-205ENST00000468284 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
CKAP2-205ENST00000468284 TRIM37O94972 964 aa13.7□□□□□ -0.22
CKAP2-205ENST00000468284 CTDSPL2Q05D32 466 aa13.7□□□□□ -0.22
CKAP2-205ENST00000468284 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
CKAP2-205ENST00000468284 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.223e-11■□□□□ 10.3
CKAP2-205ENST00000468284 GMPRP36959 345 aa13.69□□□□□ -0.22
CKAP2-205ENST00000468284 VASH1Q7L8A9 365 aaPredicted RBP13.69□□□□□ -0.22
CKAP2-205ENST00000468284 CARD14Q9BXL6 1004 aa13.69□□□□□ -0.22
CKAP2-205ENST00000468284 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
CKAP2-205ENST00000468284 SOBPA7XYQ1 873 aa13.68□□□□□ -0.22
CKAP2-205ENST00000468284 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
CKAP2-205ENST00000468284 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
CKAP2-205ENST00000468284 TNS3Q68CZ2 1445 aa13.67□□□□□ -0.22
CKAP2-205ENST00000468284 APBA3O96018 575 aa13.67□□□□□ -0.22
CKAP2-205ENST00000468284 STK26Q9P289 416 aa13.67□□□□□ -0.22
CKAP2-205ENST00000468284 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
CKAP2-205ENST00000468284 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
CKAP2-205ENST00000468284 SKIV2LQ15477 1246 aaKnown RBP13.66□□□□□ -0.22
CKAP2-205ENST00000468284 KDM4CQ9H3R0 1056 aa13.66□□□□□ -0.22
CKAP2-205ENST00000468284 GPBP1L1Q9HC44 474 aaPredicted RBP13.66□□□□□ -0.22
CKAP2-205ENST00000468284 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
CKAP2-205ENST00000468284 RREB1Q92766 1687 aa13.66□□□□□ -0.22
CKAP2-205ENST00000468284 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 UPP2O95045 317 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 C1QTNF8P60827 252 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 LINC00528Q8N1L1 170 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 MEIOBQ8N635 442 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 THSD7AQ9UPZ6 1657 aa13.65□□□□□ -0.22
CKAP2-205ENST00000468284 RGPD8O14715 1765 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms