RNA–Protein interactions for RNA: ENST00000468045.5

PREB-208, Transcript of prolactin regulatory element binding, humanhuman

TSL 2

Gene PREB, Length 3,057 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-208ENST00000468045 CCDC144BQ3MJ40 725 aa21.24■□□□□ 0.99
PREB-208ENST00000468045 CCDC144CPQ8IYA2 1237 aa21.24■□□□□ 0.99
PREB-208ENST00000468045 CACTINQ8WUQ7 758 aaKnown RBP21.24■□□□□ 0.99
PREB-208ENST00000468045 TPD52L1Q16890 204 aaPredicted RBP21.24■□□□□ 0.99
PREB-208ENST00000468045 PPP1R42Q7Z4L9 355 aa21.24■□□□□ 0.99
PREB-208ENST00000468045 USP27XA6NNY8 438 aa21.23■□□□□ 0.99
PREB-208ENST00000468045 MLH3Q9UHC1 1453 aa21.23■□□□□ 0.99
PREB-208ENST00000468045 SMTNL1A8MU46 457 aa21.23■□□□□ 0.99
PREB-208ENST00000468045 UBTFL1P0CB47 393 aaPredicted RBP21.22■□□□□ 0.99
PREB-208ENST00000468045 CCDC112Q8NEF3 446 aa21.22■□□□□ 0.99
PREB-208ENST00000468045 TNMDQ9H2S6 317 aa21.22■□□□□ 0.99
PREB-208ENST00000468045 LARP1BQ659C4 914 aaKnown RBP21.22■□□□□ 0.99
PREB-208ENST00000468045 RHPN1Q8TCX5 695 aa21.22■□□□□ 0.99
PREB-208ENST00000468045 DDX41Q9UJV9 622 aaKnown RBP21.22■□□□□ 0.99
PREB-208ENST00000468045 SLFN14P0C7P3 912 aa21.21■□□□□ 0.99
PREB-208ENST00000468045 ZNF75DP51815 510 aa21.21■□□□□ 0.99
PREB-208ENST00000468045 DNAJC25Q9H1X3 360 aa21.21■□□□□ 0.99
PREB-208ENST00000468045 TMEM51Q9NW97 253 aa21.21■□□□□ 0.99
PREB-208ENST00000468045 SOS1Q07889 1333 aaPredicted RBP21.21■□□□□ 0.99
PREB-208ENST00000468045 NPHP1O15259 732 aa21.21■□□□□ 0.99
PREB-208ENST00000468045 ST7Q9NRC1 585 aa21.2■□□□□ 0.99
PREB-208ENST00000468045 MAP3K19Q56UN5 1328 aa21.2■□□□□ 0.98
PREB-208ENST00000468045 TMEM131LA2VDJ0 1609 aa21.2■□□□□ 0.98
PREB-208ENST00000468045 TPCN1Q9ULQ1 816 aa21.2■□□□□ 0.98
PREB-208ENST00000468045 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
PREB-208ENST00000468045 A0A087WWV3 80 aa21.19■□□□□ 0.98
PREB-208ENST00000468045 SRGAP3O43295 1099 aa21.19■□□□□ 0.98
PREB-208ENST00000468045 CNTROBQ8N137 903 aa21.19■□□□□ 0.98
PREB-208ENST00000468045 KIF18AQ8NI77 898 aa21.19■□□□□ 0.98
PREB-208ENST00000468045 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
PREB-208ENST00000468045 KRT85P78386 507 aa21.18■□□□□ 0.98
PREB-208ENST00000468045 CCDC61Q9Y6R9 512 aa21.18■□□□□ 0.98
PREB-208ENST00000468045 NR1I2O75469 434 aa21.18■□□□□ 0.98
PREB-208ENST00000468045 PLA2G4DQ86XP0 818 aa21.18■□□□□ 0.98
PREB-208ENST00000468045 SSH3Q8TE77 659 aa21.18■□□□□ 0.98
PREB-208ENST00000468045 TRMT1Q9NXH9 659 aaKnown RBP21.18■□□□□ 0.98
PREB-208ENST00000468045 GOLGA6L4A6NEF3 574 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 KMT5BQ4FZB7 885 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 ZNF215Q9UL58 517 aaPredicted RBP21.17■□□□□ 0.98
PREB-208ENST00000468045 ERICH4A6NGS2 130 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 STK3Q13188 491 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 CEP135Q66GS9 1140 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 CYP46A1Q9Y6A2 500 aa21.17■□□□□ 0.98
PREB-208ENST00000468045 ZNF165P49910 485 aa21.16■□□□□ 0.98
PREB-208ENST00000468045 RIMS1Q86UR5 1692 aaKnown RBP21.16■□□□□ 0.98
PREB-208ENST00000468045 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
PREB-208ENST00000468045 NBPF7P0C2Y1 421 aaPredicted RBP21.16■□□□□ 0.98
PREB-208ENST00000468045 CCDC30Q5VVM6 783 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 VPS53Q5VIR6 699 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 TAF6LQ9Y6J9 622 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 AOX1Q06278 1338 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 PRR36Q9H6K5 1346 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 SYTL4Q96C24 671 aaPredicted RBP21.15■□□□□ 0.98
PREB-208ENST00000468045 SPATA32Q96LK8 384 aa21.15■□□□□ 0.98
PREB-208ENST00000468045 MORC2Q9Y6X9 1032 aaPredicted RBP21.15■□□□□ 0.98
PREB-208ENST00000468045 ZSWIM6Q9HCJ5 1215 aa21.14■□□□□ 0.98
PREB-208ENST00000468045 LARP1Q6PKG0 1096 aaKnown RBP21.14■□□□□ 0.97
PREB-208ENST00000468045 DDX11Q96FC9 970 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 KCNJ4P48050 445 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 TERF2Q15554 542 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 PAXBP1Q9Y5B6 917 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 CEBPZQ03701 1054 aaKnown RBP21.13■□□□□ 0.97
PREB-208ENST00000468045 GABPB1Q06547 395 aaPredicted RBP21.13■□□□□ 0.97
PREB-208ENST00000468045 OS9Q13438 667 aaPredicted RBP21.13■□□□□ 0.97
PREB-208ENST00000468045 ELF2Q15723 593 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 BICD2Q8TD16 824 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
PREB-208ENST00000468045 FBXW7Q969H0 707 aa21.12■□□□□ 0.97
PREB-208ENST00000468045 USP16Q9Y5T5 823 aa21.12■□□□□ 0.97
PREB-208ENST00000468045 LEO1Q8WVC0 666 aaPredicted RBP21.12■□□□□ 0.97
PREB-208ENST00000468045 EPB41L2O43491 1005 aaKnown RBP21.11■□□□□ 0.97
PREB-208ENST00000468045 FBXO38Q6PIJ6 1188 aa21.11■□□□□ 0.97
PREB-208ENST00000468045 FILIP1Q7Z7B0 1213 aa21.11■□□□□ 0.97
PREB-208ENST00000468045 KIF1BPQ96EK5 621 aa21.11■□□□□ 0.97
PREB-208ENST00000468045 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
PREB-208ENST00000468045 SH2B1Q9NRF2 756 aaPredicted RBP21.11■□□□□ 0.97
PREB-208ENST00000468045 EIF2S2P20042 333 aaKnown RBP21.11■□□□□ 0.97
PREB-208ENST00000468045 SYCP1Q15431 976 aa21.11■□□□□ 0.97
PREB-208ENST00000468045 TDRD7Q8NHU6 1098 aaKnown RBP21.11■□□□□ 0.97
PREB-208ENST00000468045 ZSCAN31Q96LW9 406 aaPredicted RBP21.11■□□□□ 0.97
PREB-208ENST00000468045 NPM1P06748 294 aaKnown RBP eCLIP21.1■□□□□ 0.97
PREB-208ENST00000468045 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 RBM8AQ9Y5S9 174 aaKnown RBP21.1■□□□□ 0.97
PREB-208ENST00000468045 METP08581 1390 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 C11orf57Q6ZUT1 292 aaPredicted RBP21.1■□□□□ 0.97
PREB-208ENST00000468045 LRRC8AQ8IWT6 810 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 ANXA1P04083 346 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 POLA2Q14181 598 aa21.1■□□□□ 0.97
PREB-208ENST00000468045 FOSBP53539 338 aa21.09■□□□□ 0.97
PREB-208ENST00000468045 KRT222Q8N1A0 295 aa21.09■□□□□ 0.97
PREB-208ENST00000468045 ERCC4Q92889 916 aaPredicted RBP21.09■□□□□ 0.97
PREB-208ENST00000468045 RBM6P78332 1123 aaKnown RBP21.09■□□□□ 0.97
PREB-208ENST00000468045 NECTIN1Q15223 517 aa21.09■□□□□ 0.97
PREB-208ENST00000468045 CREB3L3Q68CJ9 461 aa21.09■□□□□ 0.97
PREB-208ENST00000468045 TRERF1Q96PN7 1200 aa21.09■□□□□ 0.97
PREB-208ENST00000468045 SKILP12757 684 aa21.08■□□□□ 0.97
PREB-208ENST00000468045 PA2G4Q9UQ80 394 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms