RNA–Protein interactions for RNA: ENST00000467722.2

SPECC1-208, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 2

Gene SPECC1, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-208	ENST00000467722	CREBZF	Q9NS37	354 aa		32.39	■■■□□ 2.78
SPECC1-208	ENST00000467722	NPC1L1	Q9UHC9	1359 aa		32.39	■■■□□ 2.78
SPECC1-208	ENST00000467722	U2SURP	O15042	1029 aa	Known RBP	32.37	■■■□□ 2.77
SPECC1-208	ENST00000467722	DDN	O94850	711 aa	Predicted RBP	32.37	■■■□□ 2.77
SPECC1-208	ENST00000467722	POTEI	P0CG38	1075 aa		32.37	■■■□□ 2.77
SPECC1-208	ENST00000467722	POTEJ	P0CG39	1038 aa		32.37	■■■□□ 2.77
SPECC1-208	ENST00000467722	ST5	P78524	1137 aa		32.37	■■■□□ 2.77
SPECC1-208	ENST00000467722	SOGA3	Q5TF21	947 aa		32.36	■■■□□ 2.77
SPECC1-208	ENST00000467722	MASTL	Q96GX5	879 aa		32.35	■■■□□ 2.77
SPECC1-208	ENST00000467722	NPHP1	O15259	732 aa		32.34	■■■□□ 2.77
SPECC1-208	ENST00000467722	NPM2	Q86SE8	214 aa	Known RBP	32.34	■■■□□ 2.77
SPECC1-208	ENST00000467722	DZIP3	Q86Y13	1208 aa	Known RBP	32.34	■■■□□ 2.77
SPECC1-208	ENST00000467722	KCNQ3	O43525	872 aa		32.33	■■■□□ 2.77
SPECC1-208	ENST00000467722	C7orf43	Q8WVR3	580 aa		32.32	■■■□□ 2.76
SPECC1-208	ENST00000467722	MKRN1	Q9UHC7	482 aa	Known RBP	32.32	■■■□□ 2.76
SPECC1-208	ENST00000467722	BTBD11	A6QL63	1104 aa		32.31	■■■□□ 2.76
SPECC1-208	ENST00000467722	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.31	■■■□□ 2.76
SPECC1-208	ENST00000467722	ADAMTSL1	Q8N6G6	1762 aa		32.3	■■■□□ 2.76
SPECC1-208	ENST00000467722	CNTNAP1	P78357	1384 aa		32.3	■■■□□ 2.76
SPECC1-208	ENST00000467722	PASK	Q96RG2	1323 aa		32.29	■■■□□ 2.76
SPECC1-208	ENST00000467722	IQCA1L	A6NCM1	817 aa		32.29	■■■□□ 2.76
SPECC1-208	ENST00000467722	CLEC4G	Q6UXB4	293 aa		32.29	■■■□□ 2.76
SPECC1-208	ENST00000467722	PHACTR3	Q96KR7	559 aa		32.29	■■■□□ 2.76
SPECC1-208	ENST00000467722	USP16	Q9Y5T5	823 aa		32.29	■■■□□ 2.76
SPECC1-208	ENST00000467722	CCER1	Q8TC90	406 aa	Predicted RBP	32.28	■■■□□ 2.76
SPECC1-208	ENST00000467722	PIP4K2A	P48426	406 aa	Predicted RBP	32.27	■■■□□ 2.76
SPECC1-208	ENST00000467722	CCDC93	Q567U6	631 aa		32.27	■■■□□ 2.76
SPECC1-208	ENST00000467722	LDHD	Q86WU2	507 aa		32.27	■■■□□ 2.76
SPECC1-208	ENST00000467722	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.27	■■■□□ 2.76
SPECC1-208	ENST00000467722	KLRG2	A4D1S0	409 aa	Predicted RBP	32.26	■■■□□ 2.75
SPECC1-208	ENST00000467722	RSPH6A	Q9H0K4	717 aa		32.26	■■■□□ 2.75
SPECC1-208	ENST00000467722	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.26	■■■□□ 2.75
SPECC1-208	ENST00000467722	PRAMEF22	A3QJZ6	481 aa		32.25	■■■□□ 2.75
SPECC1-208	ENST00000467722	PRKAR2B	P31323	418 aa		32.25	■■■□□ 2.75
SPECC1-208	ENST00000467722	NPR1	P16066	1061 aa		32.24	■■■□□ 2.75
SPECC1-208	ENST00000467722	ZNF652	Q9Y2D9	606 aa		32.24	■■■□□ 2.75
SPECC1-208	ENST00000467722	LAMB4	A4D0S4	1761 aa		32.24	■■■□□ 2.75
SPECC1-208	ENST00000467722	RGL2	O15211	777 aa		32.22	■■■□□ 2.75
SPECC1-208	ENST00000467722	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.22	■■■□□ 2.75
SPECC1-208	ENST00000467722	ZNF541	Q9H0D2	1346 aa		32.22	■■■□□ 2.75
SPECC1-208	ENST00000467722	FOXN1	O15353	648 aa		32.21	■■■□□ 2.75
SPECC1-208	ENST00000467722	SNRPA1	P09661	255 aa	Known RBP	32.21	■■■□□ 2.75
SPECC1-208	ENST00000467722	CNGB1	Q14028	1251 aa	Predicted RBP	32.21	■■■□□ 2.75
SPECC1-208	ENST00000467722	ITGBL1	O95965	494 aa	Predicted RBP	32.19	■■■□□ 2.74
SPECC1-208	ENST00000467722	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.19	■■■□□ 2.74
SPECC1-208	ENST00000467722	SNED1	Q8TER0	1413 aa		32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	NBPF26	B4DH59	902 aa		32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	NBPF10	Q6P3W6	841 aa	Known RBP	32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	OLFM4	Q6UX06	510 aa		32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	TPTE2	Q6XPS3	522 aa		32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	NBPF15	Q8N660	670 aa		32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
SPECC1-208	ENST00000467722	TMEM88B	A6NKF7	163 aa		32.16	■■■□□ 2.74
SPECC1-208	ENST00000467722	PRDM10	Q9NQV6	1147 aa		32.16	■■■□□ 2.74
SPECC1-208	ENST00000467722	NUP98	P52948	1817 aa		32.16	■■■□□ 2.74
SPECC1-208	ENST00000467722	MCM10	Q7L590	875 aa		32.15	■■■□□ 2.74
SPECC1-208	ENST00000467722	RTKN2	Q8IZC4	609 aa		32.15	■■■□□ 2.74
SPECC1-208	ENST00000467722	HACL1	Q9UJ83	578 aa		32.15	■■■□□ 2.74
SPECC1-208	ENST00000467722	VEGFB	P49765	207 aa		32.14	■■■□□ 2.74
SPECC1-208	ENST00000467722	EAPP	Q56P03	285 aa	Predicted RBP	32.14	■■■□□ 2.74
SPECC1-208	ENST00000467722	CFAP53	Q96M91	514 aa		32.14	■■■□□ 2.74
SPECC1-208	ENST00000467722	RTF1	Q92541	710 aa	Known RBP	32.13	■■■□□ 2.73
SPECC1-208	ENST00000467722	FZD9	O00144	591 aa		32.12	■■■□□ 2.73
SPECC1-208	ENST00000467722	EPHX2	P34913	555 aa		32.12	■■■□□ 2.73
SPECC1-208	ENST00000467722	KDM3B	Q7LBC6	1761 aa		32.12	■■■□□ 2.73
SPECC1-208	ENST00000467722	DLG5	Q8TDM6	1919 aa		32.1	■■■□□ 2.73
SPECC1-208	ENST00000467722	RNF123	Q5XPI4	1314 aa		32.1	■■■□□ 2.73
SPECC1-208	ENST00000467722	IARS	P41252	1262 aa	Known RBP	32.1	■■■□□ 2.73
SPECC1-208	ENST00000467722	COL4A5	P29400	1685 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	FAM177B	A6PVY3	158 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	ALDH1B1	P30837	517 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	CTCF	P49711	727 aa	Predicted RBP	32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	HLF	Q16534	295 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	PNMA8A	Q86V59	439 aa	Predicted RBP	32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	NUDC	Q9Y266	331 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	LTBP1	Q14766	1721 aa		32.09	■■■□□ 2.73
SPECC1-208	ENST00000467722	DCTN1	Q14203	1278 aa		32.08	■■■□□ 2.73
SPECC1-208	ENST00000467722	AIDA	Q96BJ3	306 aa		32.08	■■■□□ 2.73
SPECC1-208	ENST00000467722	ABCC12	Q96J65	1359 aa		32.07	■■■□□ 2.73
SPECC1-208	ENST00000467722	CRY2	Q49AN0	593 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	GPC2	Q8N158	579 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	SYNE4	Q8N205	404 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	PSMD1	Q99460	953 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	WBP1L	Q9NX94	342 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	CLEC11A	Q9Y240	323 aa		32.07	■■■□□ 2.72
SPECC1-208	ENST00000467722	RASSF10	A6NK89	507 aa		32.06	■■■□□ 2.72
SPECC1-208	ENST00000467722	HTATSF1	O43719	755 aa	Known RBP	32.06	■■■□□ 2.72
SPECC1-208	ENST00000467722	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.06	■■■□□ 2.72
SPECC1-208	ENST00000467722	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
SPECC1-208	ENST00000467722	THSD7B	Q9C0I4	1608 aa		32.06	■■■□□ 2.72
SPECC1-208	ENST00000467722	CNTROB	Q8N137	903 aa		32.05	■■■□□ 2.72
SPECC1-208	ENST00000467722	RIC1	Q4ADV7	1423 aa		32.05	■■■□□ 2.72
SPECC1-208	ENST00000467722	MAP1S	Q66K74	1059 aa	Predicted RBP	32.04	■■■□□ 2.72
SPECC1-208	ENST00000467722	TRPM7	Q96QT4	1865 aa		32.02	■■■□□ 2.72
SPECC1-208	ENST00000467722	GTF2E1	P29083	439 aa	Predicted RBP	32.02	■■■□□ 2.72
SPECC1-208	ENST00000467722	TAF7	Q15545	349 aa	Predicted RBP	32.02	■■■□□ 2.72
SPECC1-208	ENST00000467722	NYX	Q9GZU5	481 aa		32.01	■■■□□ 2.71
SPECC1-208	ENST00000467722	PPP2R1A	P30153	589 aa		32	■■■□□ 2.71
SPECC1-208	ENST00000467722	JDP2	Q8WYK2	163 aa		32	■■■□□ 2.71
SPECC1-208	ENST00000467722	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.99	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms