RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 NEUROD2Q15784 382 aa18.5■□□□□ 0.55
CCHCR1-211ENST00000467553 PRR5LQ6MZQ0 368 aa18.5■□□□□ 0.55
CCHCR1-211ENST00000467553 MIS18AQ9NYP9 233 aa18.5■□□□□ 0.55
CCHCR1-211ENST00000467553 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
CCHCR1-211ENST00000467553 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
CCHCR1-211ENST00000467553 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-211ENST00000467553 ANKRD31Q8N7Z5 1873 aa18.49■□□□□ 0.55
CCHCR1-211ENST00000467553 NPHP1O15259 732 aa18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 TMPOP42166 694 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 SOGA3Q5TF21 947 aa18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 CNKSR1Q969H4 720 aa18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.554e-6■■■□□ 15
CCHCR1-211ENST00000467553 RRP7AQ9Y3A4 280 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-211ENST00000467553 STYK1Q6J9G0 422 aa18.47■□□□□ 0.55
CCHCR1-211ENST00000467553 CCDC88AQ3V6T2 1871 aa18.46■□□□□ 0.55
CCHCR1-211ENST00000467553 GLTPD2A6NH11 291 aa18.46■□□□□ 0.55
CCHCR1-211ENST00000467553 MASTLQ96GX5 879 aa18.46■□□□□ 0.55
CCHCR1-211ENST00000467553 RASSF7Q02833 373 aa18.45■□□□□ 0.54
CCHCR1-211ENST00000467553 TPTE2Q6XPS3 522 aa18.45■□□□□ 0.54
CCHCR1-211ENST00000467553 RRAGCQ9HB90 399 aa18.45■□□□□ 0.54
CCHCR1-211ENST00000467553 LTBP3Q9NS15 1303 aa18.45■□□□□ 0.54
CCHCR1-211ENST00000467553 FER1L6Q2WGJ9 1857 aa18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 SRGNP10124 158 aa18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 VEGFAP15692 232 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 DPY19L2Q6NUT2 758 aa18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 NBPF5PQ86XG9 351 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 DICER1Q9UPY3 1922 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 ARFGEF2Q9Y6D5 1785 aa18.44■□□□□ 0.54
CCHCR1-211ENST00000467553 NFKBIEO00221 500 aa18.43■□□□□ 0.54
CCHCR1-211ENST00000467553 LMOD3Q0VAK6 560 aa18.43■□□□□ 0.54
CCHCR1-211ENST00000467553 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
CCHCR1-211ENST00000467553 PRAMEF22A3QJZ6 481 aa18.42■□□□□ 0.54
CCHCR1-211ENST00000467553 KLRG2A4D1S0 409 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-211ENST00000467553 SMC1BQ8NDV3 1235 aa18.42■□□□□ 0.54
CCHCR1-211ENST00000467553 COL11A2P13942 1736 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-211ENST00000467553 TIAM2Q8IVF5 1701 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 KDM3BQ7LBC6 1761 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 NBPF26B4DH59 902 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 ERVV-1B6SEH8 477 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 C21orf2O43822 256 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 NBPF10Q6P3W6 841 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 NBPF15Q8N660 670 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 MRS2Q9HD23 443 aa18.41■□□□□ 0.54
CCHCR1-211ENST00000467553 NPR1P16066 1061 aa18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 PRELPP51888 382 aa18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 DNAJC5GQ8N7S2 189 aa18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 BABAM1Q9NWV8 329 aa18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCHCR1-211ENST00000467553 APAF1O14727 1248 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 PRPF40BQ6NWY9 871 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 NYXQ9GZU5 481 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 TSPYL4Q9UJ04 414 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 SLX4Q8IY92 1834 aa18.39■□□□□ 0.53
CCHCR1-211ENST00000467553 ALDH1B1P30837 517 aa18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 ERFEQ4G0M1 354 aa18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
CCHCR1-211ENST00000467553 CCDC93Q567U6 631 aa18.36■□□□□ 0.53
CCHCR1-211ENST00000467553 KIF6Q6ZMV9 814 aa18.36■□□□□ 0.53
CCHCR1-211ENST00000467553 C7orf43Q8WVR3 580 aa18.36■□□□□ 0.53
CCHCR1-211ENST00000467553 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 MAP3K15Q6ZN16 1313 aa18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 IFFO2Q5TF58 517 aa18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 RTKN2Q8IZC4 609 aa18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 NUP98P52948 1817 aa18.35■□□□□ 0.53
CCHCR1-211ENST00000467553 HLFQ16534 295 aa18.34■□□□□ 0.53
CCHCR1-211ENST00000467553 KLRG1Q96E93 195 aa18.34■□□□□ 0.53
CCHCR1-211ENST00000467553 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-211ENST00000467553 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
CCHCR1-211ENST00000467553 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
CCHCR1-211ENST00000467553 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCHCR1-211ENST00000467553 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
CCHCR1-211ENST00000467553 JMYQ8N9B5 988 aa18.32■□□□□ 0.52
CCHCR1-211ENST00000467553 POTECB2RU33 542 aa18.31■□□□□ 0.52
CCHCR1-211ENST00000467553 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
CCHCR1-211ENST00000467553 NGEFQ8N5V2 710 aa18.31■□□□□ 0.52
CCHCR1-211ENST00000467553 IQCA1LA6NCM1 817 aa18.3■□□□□ 0.52
CCHCR1-211ENST00000467553 CHL1O00533 1208 aa18.3■□□□□ 0.52
CCHCR1-211ENST00000467553 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-211ENST00000467553 GIGYF2Q6Y7W6 1299 aaKnown RBP18.3■□□□□ 0.52
CCHCR1-211ENST00000467553 FAM9BQ8IZU0 186 aa18.3■□□□□ 0.52
CCHCR1-211ENST00000467553 SCN4AP35499 1836 aa18.29■□□□□ 0.52
CCHCR1-211ENST00000467553 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
CCHCR1-211ENST00000467553 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
CCHCR1-211ENST00000467553 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-211ENST00000467553 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 MYL6BP14649 208 aa18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms