RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CASP8AP2Q9UKL3 1982 aa14.17□□□□□ -0.14
HDAC3-203ENST00000467533 NPHP1O15259 732 aa14.17□□□□□ -0.14
HDAC3-203ENST00000467533 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
HDAC3-203ENST00000467533 DDX21Q9NR30 783 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDAC3-203ENST00000467533 DGKZQ13574 1117 aa14.16□□□□□ -0.14
HDAC3-203ENST00000467533 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
HDAC3-203ENST00000467533 UBR2Q8IWV8 1755 aa14.15□□□□□ -0.14
HDAC3-203ENST00000467533 MRC1P22897 1456 aa14.15□□□□□ -0.14
HDAC3-203ENST00000467533 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
HDAC3-203ENST00000467533 TNNT2P45379 298 aaPredicted RBP14.15□□□□□ -0.14
HDAC3-203ENST00000467533 CDCA8Q53HL2 280 aa14.15□□□□□ -0.14
HDAC3-203ENST00000467533 CCDC93Q567U6 631 aa14.15□□□□□ -0.14
HDAC3-203ENST00000467533 STYK1Q6J9G0 422 aa14.15□□□□□ -0.14
HDAC3-203ENST00000467533 AOC2O75106 756 aa14.14□□□□□ -0.15
HDAC3-203ENST00000467533 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
HDAC3-203ENST00000467533 ZNF277Q9NRM2 450 aaPredicted RBP14.14□□□□□ -0.15
HDAC3-203ENST00000467533 BCORQ6W2J9 1755 aa14.14□□□□□ -0.15
HDAC3-203ENST00000467533 A0A087WZG4 1122 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 CA12O43570 354 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 ST5P78524 1137 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC3-203ENST00000467533 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 AEBP1Q8IUX7 1158 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 MASTLQ96GX5 879 aa14.13□□□□□ -0.15
HDAC3-203ENST00000467533 SRGNP10124 158 aa14.12□□□□□ -0.15
HDAC3-203ENST00000467533 SOX10P56693 466 aa14.12□□□□□ -0.15
HDAC3-203ENST00000467533 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC3-203ENST00000467533 PRPF38BQ5VTL8 546 aaKnown RBP14.12□□□□□ -0.15
HDAC3-203ENST00000467533 SLC52A2Q9HAB3 445 aa14.12□□□□□ -0.15
HDAC3-203ENST00000467533 MAP2K2P36507 400 aa14.11□□□□□ -0.15
HDAC3-203ENST00000467533 ZNF330Q9Y3S2 320 aaPredicted RBP14.11□□□□□ -0.15
HDAC3-203ENST00000467533 LMOD1P29536 600 aaPredicted RBP14.1□□□□□ -0.15
HDAC3-203ENST00000467533 GPC2Q8N158 579 aa14.1□□□□□ -0.15
HDAC3-203ENST00000467533 TLL2Q9Y6L7 1015 aa14.1□□□□□ -0.15
HDAC3-203ENST00000467533 IARSP41252 1262 aaKnown RBP14.09□□□□□ -0.15
HDAC3-203ENST00000467533 EIF5P55010 431 aaKnown RBP14.09□□□□□ -0.15
HDAC3-203ENST00000467533 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
HDAC3-203ENST00000467533 SETDB2Q96T68 719 aa14.09□□□□□ -0.15
HDAC3-203ENST00000467533 GJA3Q9Y6H8 435 aa14.09□□□□□ -0.15
HDAC3-203ENST00000467533 FZD9O00144 591 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 TRAF5O00463 557 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 STARD3NLO95772 234 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 BRPF1P55201 1214 aaPredicted RBP14.08□□□□□ -0.16
HDAC3-203ENST00000467533 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 C7orf43Q8WVR3 580 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 TBC1D2BQ9UPU7 963 aa14.08□□□□□ -0.16
HDAC3-203ENST00000467533 CST9Q5W186 159 aa14.07□□□□□ -0.16
HDAC3-203ENST00000467533 SULT6B1Q6IMI4 303 aa14.07□□□□□ -0.16
HDAC3-203ENST00000467533 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
HDAC3-203ENST00000467533 NPR1P16066 1061 aa14.06□□□□□ -0.16
HDAC3-203ENST00000467533 EIF6P56537 245 aaKnown RBP14.06□□□□□ -0.16
HDAC3-203ENST00000467533 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
HDAC3-203ENST00000467533 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
HDAC3-203ENST00000467533 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
HDAC3-203ENST00000467533 RNMTO43148 476 aaKnown RBP14.05□□□□□ -0.16
HDAC3-203ENST00000467533 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
HDAC3-203ENST00000467533 NPM2Q86SE8 214 aaKnown RBP14.05□□□□□ -0.16
HDAC3-203ENST00000467533 TTC5Q8N0Z6 440 aa14.05□□□□□ -0.16
HDAC3-203ENST00000467533 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
HDAC3-203ENST00000467533 SAPCD2Q86UD0 394 aa14.04□□□□□ -0.16
HDAC3-203ENST00000467533 COL4A5P29400 1685 aa14.04□□□□□ -0.16
HDAC3-203ENST00000467533 CELF2O95319 508 aaKnown RBP14.03□□□□□ -0.16
HDAC3-203ENST00000467533 EPS15P42566 896 aa14.03□□□□□ -0.16
HDAC3-203ENST00000467533 SCNN1DP51172 638 aa14.03□□□□□ -0.16
HDAC3-203ENST00000467533 USP50Q70EL3 339 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-203ENST00000467533 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
HDAC3-203ENST00000467533 CAMTA2O94983 1202 aa14.02□□□□□ -0.17
HDAC3-203ENST00000467533 IL6STP40189 918 aaPredicted RBP14.02□□□□□ -0.17
HDAC3-203ENST00000467533 HEG1Q9ULI3 1381 aa14.01□□□□□ -0.17
HDAC3-203ENST00000467533 HHIPL1Q96JK4 782 aa14.01□□□□□ -0.17
HDAC3-203ENST00000467533 ZNF408Q9H9D4 720 aa14.01□□□□□ -0.17
HDAC3-203ENST00000467533 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
HDAC3-203ENST00000467533 PSMD1Q99460 953 aa14□□□□□ -0.17
HDAC3-203ENST00000467533 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
HDAC3-203ENST00000467533 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-203ENST00000467533 NOGQ13253 232 aa13.99□□□□□ -0.17
HDAC3-203ENST00000467533 POLR3GLQ9BT43 218 aa13.99□□□□□ -0.17
HDAC3-203ENST00000467533 TEX13AQ9BXU3 409 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-203ENST00000467533 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
HDAC3-203ENST00000467533 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
HDAC3-203ENST00000467533 GCC1Q96CN9 775 aa13.98□□□□□ -0.17
HDAC3-203ENST00000467533 ZNF496Q96IT1 587 aaPredicted RBP13.98□□□□□ -0.17
HDAC3-203ENST00000467533 GLIS2Q9BZE0 524 aaPredicted RBP13.98□□□□□ -0.17
HDAC3-203ENST00000467533 ADARB2Q9NS39 739 aaKnown RBP13.98□□□□□ -0.17
HDAC3-203ENST00000467533 AKAP11Q9UKA4 1901 aa13.98□□□□□ -0.17
HDAC3-203ENST00000467533 A1BGP04217 495 aa13.97□□□□□ -0.17
HDAC3-203ENST00000467533 NBPF15Q8N660 670 aa13.97□□□□□ -0.17
HDAC3-203ENST00000467533 ZIC5Q96T25 663 aa13.97□□□□□ -0.17
HDAC3-203ENST00000467533 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
HDAC3-203ENST00000467533 KLRG2A4D1S0 409 aaPredicted RBP13.96□□□□□ -0.17
HDAC3-203ENST00000467533 FAM177BA6PVY3 158 aa13.96□□□□□ -0.17
HDAC3-203ENST00000467533 IL13P35225 146 aa13.96□□□□□ -0.17
HDAC3-203ENST00000467533 NIM1KQ8IY84 436 aa13.96□□□□□ -0.17
HDAC3-203ENST00000467533 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
HDAC3-203ENST00000467533 HMOX1P09601 288 aa13.95□□□□□ -0.18
HDAC3-203ENST00000467533 TPTE2Q6XPS3 522 aa13.95□□□□□ -0.18
HDAC3-203ENST00000467533 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
HDAC3-203ENST00000467533 HUNKP57058 714 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 TEFQ10587 303 aa13.94□□□□□ -0.18
HDAC3-203ENST00000467533 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms