RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 USP44Q9H0E7 712 aa17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
PRPF38B-204ENST00000467302 C5P01031 1676 aa17.88■□□□□ 0.45
PRPF38B-204ENST00000467302 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
PRPF38B-204ENST00000467302 TMEM63CQ9P1W3 806 aa17.88■□□□□ 0.45
PRPF38B-204ENST00000467302 EPB41L2O43491 1005 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-204ENST00000467302 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
PRPF38B-204ENST00000467302 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
PRPF38B-204ENST00000467302 RILPL2Q969X0 211 aa17.87■□□□□ 0.45
PRPF38B-204ENST00000467302 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
PRPF38B-204ENST00000467302 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 CYP27B1O15528 508 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 ANXA1P04083 346 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 UBTFL1P0CB47 393 aaPredicted RBP17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 LRSAM1Q6UWE0 723 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 SSH3Q8TE77 659 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 NSFL1CQ9UNZ2 370 aaKnown RBP17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 ZNF790Q6PG37 636 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
PRPF38B-204ENST00000467302 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
PRPF38B-204ENST00000467302 ROBO1Q9Y6N7 1651 aa17.85■□□□□ 0.45
PRPF38B-204ENST00000467302 MBD3O95983 291 aa17.85■□□□□ 0.45
PRPF38B-204ENST00000467302 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
PRPF38B-204ENST00000467302 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
PRPF38B-204ENST00000467302 PRAMEF22A3QJZ6 481 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 SLC39A6Q13433 755 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 CARD10Q9BWT7 1032 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 IL25Q9H293 177 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 ADCY9O60503 1353 aa17.84■□□□□ 0.45
PRPF38B-204ENST00000467302 SHANK3Q9BYB0 1731 aa17.83■□□□□ 0.45
PRPF38B-204ENST00000467302 POLA2Q14181 598 aa17.83■□□□□ 0.45
PRPF38B-204ENST00000467302 FOXD4L5Q5VV16 416 aaPredicted RBP17.83■□□□□ 0.45
PRPF38B-204ENST00000467302 FOXD4L4Q8WXT5 416 aaPredicted RBP17.83■□□□□ 0.45
PRPF38B-204ENST00000467302 COL22A1Q8NFW1 1626 aaPredicted RBP17.83■□□□□ 0.44
PRPF38B-204ENST00000467302 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
PRPF38B-204ENST00000467302 RAB11FIP3O75154 756 aa17.82■□□□□ 0.44
PRPF38B-204ENST00000467302 SYCE3A1L190 88 aa17.82■□□□□ 0.44
PRPF38B-204ENST00000467302 HSPA4P34932 840 aa17.82■□□□□ 0.44
PRPF38B-204ENST00000467302 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
PRPF38B-204ENST00000467302 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
PRPF38B-204ENST00000467302 COL14A1Q05707 1796 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 OFD1O75665 1012 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 KSR2Q6VAB6 950 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 IL1RAPL2Q9NP60 686 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 DDX21Q9NR30 783 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 ZCRB1Q8TBF4 217 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 PI4K2BQ8TCG2 481 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 UPF3BQ9BZI7 483 aaKnown RBP17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 MAP3K2Q9Y2U5 619 aa17.81■□□□□ 0.44
PRPF38B-204ENST00000467302 GLI3P10071 1580 aa17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 TPM2P07951 284 aa17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 IL2RBP14784 551 aa17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 CABP4P57796 275 aa17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 LTBP4Q8N2S1 1624 aa17.8■□□□□ 0.44
PRPF38B-204ENST00000467302 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 RRP9O43818 475 aaKnown RBP17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 DDX58O95786 925 aaKnown RBP17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 EVA1CP58658 441 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 NUTM1Q86Y26 1132 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 RHPN1Q8TCX5 695 aa17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
PRPF38B-204ENST00000467302 SGSM2O43147 1006 aa17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 ZNF500O60304 480 aaPredicted RBP17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 SURF6O75683 361 aaKnown RBP17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 PDIA6Q15084 440 aa17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 FMNL2Q96PY5 1086 aa17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 RAD50Q92878 1312 aa17.78■□□□□ 0.44
PRPF38B-204ENST00000467302 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
PRPF38B-204ENST00000467302 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
PRPF38B-204ENST00000467302 NKX1-1Q15270 411 aaPredicted RBP17.77■□□□□ 0.43
PRPF38B-204ENST00000467302 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.43
PRPF38B-204ENST00000467302 ERVV-2B6SEH9 535 aa17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 KIF1BPQ96EK5 621 aa17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 WDR33Q9C0J8 1336 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 PLCH1Q4KWH8 1693 aa17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 TTC14Q96N46 770 aa17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
PRPF38B-204ENST00000467302 USP42Q9H9J4 1324 aaKnown RBP17.75■□□□□ 0.43
PRPF38B-204ENST00000467302 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
PRPF38B-204ENST00000467302 TERF1P54274 439 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms