RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 NEURL1BA8MQ27 555 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 MYD88Q99836 296 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 PALD1Q9ULE6 856 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 ST18O60284 1047 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 ZCRB1Q8TBF4 217 aaKnown RBP13.95□□□□□ -0.18
HPS1-208ENST00000467246 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
HPS1-208ENST00000467246 NEXNQ0ZGT2 675 aa13.94□□□□□ -0.18
HPS1-208ENST00000467246 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
HPS1-208ENST00000467246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.94□□□□□ -0.18
HPS1-208ENST00000467246 PLEKHG2Q9H7P9 1386 aa13.94□□□□□ -0.18
HPS1-208ENST00000467246 GCKRQ14397 625 aa13.94□□□□□ -0.18
HPS1-208ENST00000467246 CLASRPQ8N2M8 674 aaKnown RBP13.94□□□□□ -0.18
HPS1-208ENST00000467246 JARID2Q92833 1246 aaPredicted RBP13.94□□□□□ -0.18
HPS1-208ENST00000467246 NEK4P51957 841 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 STRN4Q9NRL3 753 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
HPS1-208ENST00000467246 TRAK2O60296 914 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 SSFA2P28290 1259 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
HPS1-208ENST00000467246 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
HPS1-208ENST00000467246 SASH1O94885 1247 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
HPS1-208ENST00000467246 SIL1Q9H173 461 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 TTC41PQ6P2S7 1318 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 ERC1Q8IUD2 1116 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
HPS1-208ENST00000467246 DDX54Q8TDD1 881 aaKnown RBP13.92□□□□□ -0.18
HPS1-208ENST00000467246 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 PTCD1O75127 700 aaKnown RBP13.91□□□□□ -0.18
HPS1-208ENST00000467246 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
HPS1-208ENST00000467246 AACSQ86V21 672 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 ZGPATQ8N5A5 531 aaKnown RBP13.91□□□□□ -0.18
HPS1-208ENST00000467246 IFIT2P09913 472 aaKnown RBP13.91□□□□□ -0.18
HPS1-208ENST00000467246 IL2RBP14784 551 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 MCCP23508 829 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 G3BP1Q13283 466 aaKnown RBP eCLIP13.91□□□□□ -0.18
HPS1-208ENST00000467246 ECHDC1Q9NTX5 307 aa13.91□□□□□ -0.18
HPS1-208ENST00000467246 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 SGSM2O43147 1006 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 NBPF14Q5TI25 921 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 NBPF10Q6P3W6 841 aaKnown RBP13.9□□□□□ -0.18
HPS1-208ENST00000467246 NBPF15Q8N660 670 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 EAF2Q96CJ1 260 aaPredicted RBP13.9□□□□□ -0.18
HPS1-208ENST00000467246 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 CWC27Q6UX04 472 aaKnown RBP13.9□□□□□ -0.18
HPS1-208ENST00000467246 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
HPS1-208ENST00000467246 EVA1CP58658 441 aa13.89□□□□□ -0.19
HPS1-208ENST00000467246 ANAPC15P60006 121 aa13.89□□□□□ -0.19
HPS1-208ENST00000467246 PKP1Q13835 747 aa13.89□□□□□ -0.19
HPS1-208ENST00000467246 CCDC8Q9H0W5 538 aaPredicted RBP13.89□□□□□ -0.19
HPS1-208ENST00000467246 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
HPS1-208ENST00000467246 UBE3BQ7Z3V4 1068 aa13.89□□□□□ -0.19
HPS1-208ENST00000467246 UPF3BQ9BZI7 483 aaKnown RBP13.88□□□□□ -0.19
HPS1-208ENST00000467246 TLR7Q9NYK1 1049 aaKnown RBP13.88□□□□□ -0.19
HPS1-208ENST00000467246 GLI3P10071 1580 aa13.88□□□□□ -0.19
HPS1-208ENST00000467246 HSPA4P34932 840 aa13.88□□□□□ -0.19
HPS1-208ENST00000467246 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
HPS1-208ENST00000467246 PLBD2Q8NHP8 589 aa13.88□□□□□ -0.19
HPS1-208ENST00000467246 TMX3Q96JJ7 454 aa13.88□□□□□ -0.19
HPS1-208ENST00000467246 A1BGP04217 495 aa13.88□□□□□ -0.19
HPS1-208ENST00000467246 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
HPS1-208ENST00000467246 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
HPS1-208ENST00000467246 A0A087WZG4 1122 aa13.87□□□□□ -0.19
HPS1-208ENST00000467246 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
HPS1-208ENST00000467246 GPATCH3Q96I76 525 aa13.87□□□□□ -0.19
HPS1-208ENST00000467246 LSG1Q9H089 658 aaKnown RBP13.87□□□□□ -0.19
HPS1-208ENST00000467246 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
HPS1-208ENST00000467246 RAD50Q92878 1312 aa13.86□□□□□ -0.19
HPS1-208ENST00000467246 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
HPS1-208ENST00000467246 CWC22Q9HCG8 908 aaKnown RBP13.86□□□□□ -0.19
HPS1-208ENST00000467246 EPB41L2O43491 1005 aaKnown RBP13.86□□□□□ -0.19
HPS1-208ENST00000467246 CYP2E1P05181 493 aaPredicted RBP13.86□□□□□ -0.19
HPS1-208ENST00000467246 DIAPH3Q9NSV4 1193 aa13.86□□□□□ -0.19
HPS1-208ENST00000467246 BAG4O95429 457 aaKnown RBP13.85□□□□□ -0.19
HPS1-208ENST00000467246 RFX5P48382 616 aaPredicted RBP13.85□□□□□ -0.19
HPS1-208ENST00000467246 NUCB2P80303 420 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
HPS1-208ENST00000467246 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 CLEC17AQ6ZS10 378 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 COPRSQ9NQ92 184 aa13.85□□□□□ -0.19
HPS1-208ENST00000467246 MCM2P49736 904 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 CASP7P55210 303 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
HPS1-208ENST00000467246 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 BOLA2Q9H3K6 86 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 SNX14Q9Y5W7 946 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 RRAGDQ9NQL2 400 aaPredicted RBP13.84□□□□□ -0.19
HPS1-208ENST00000467246 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 ERBB4Q15303 1308 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
HPS1-208ENST00000467246 PTH1RQ03431 593 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms