RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 RGL2O15211 777 aa12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 A1BGP04217 495 aa12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
PTPDC1-203ENST00000467049 CLEC4GQ6UXB4 293 aa12.02□□□□□ -0.48
PTPDC1-203ENST00000467049 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.48
PTPDC1-203ENST00000467049 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.48
PTPDC1-203ENST00000467049 CCDC24Q8N4L8 307 aa12.02□□□□□ -0.48
PTPDC1-203ENST00000467049 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.49
PTPDC1-203ENST00000467049 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
PTPDC1-203ENST00000467049 NPHP1O15259 732 aa12.02□□□□□ -0.49
PTPDC1-203ENST00000467049 IQCA1LA6NCM1 817 aa12.01□□□□□ -0.49
PTPDC1-203ENST00000467049 KCNQ3O43525 872 aa12.01□□□□□ -0.49
PTPDC1-203ENST00000467049 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
PTPDC1-203ENST00000467049 RSPH6AQ9H0K4 717 aa12.01□□□□□ -0.49
PTPDC1-203ENST00000467049 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
PTPDC1-203ENST00000467049 CAPN15O75808 1086 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 DDNO94850 711 aaPredicted RBP12□□□□□ -0.49
PTPDC1-203ENST00000467049 CCDC93Q567U6 631 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 LDHDQ86WU2 507 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 C7orf43Q8WVR3 580 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 KLRG2A4D1S0 409 aaPredicted RBP12□□□□□ -0.49
PTPDC1-203ENST00000467049 NPR1P16066 1061 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 PRKAR2BP31323 418 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
PTPDC1-203ENST00000467049 CFAP53Q96M91 514 aa12□□□□□ -0.49
PTPDC1-203ENST00000467049 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 CNTNAP1P78357 1384 aa11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 NUP98P52948 1817 aa11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
PTPDC1-203ENST00000467049 DLG5Q8TDM6 1919 aa11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 KDM3BQ7LBC6 1761 aa11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
PTPDC1-203ENST00000467049 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
PTPDC1-203ENST00000467049 NUDCQ9Y266 331 aa11.97□□□□□ -0.49
PTPDC1-203ENST00000467049 HTATSF1O43719 755 aaKnown RBP11.97□□□□□ -0.49
PTPDC1-203ENST00000467049 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
PTPDC1-203ENST00000467049 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
PTPDC1-203ENST00000467049 RTF1Q92541 710 aaKnown RBP11.96□□□□□ -0.49
PTPDC1-203ENST00000467049 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
PTPDC1-203ENST00000467049 ZNF541Q9H0D2 1346 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 HACL1Q9UJ83 578 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 RIC1Q4ADV7 1423 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 TRPM7Q96QT4 1865 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 TMEM88BA6NKF7 163 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 ITGBL1O95965 494 aaPredicted RBP11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 ALDH1B1P30837 517 aa11.95□□□□□ -0.5
PTPDC1-203ENST00000467049 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
PTPDC1-203ENST00000467049 MCM10Q7L590 875 aa11.94□□□□□ -0.5
PTPDC1-203ENST00000467049 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
PTPDC1-203ENST00000467049 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
PTPDC1-203ENST00000467049 FZD9O00144 591 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 FOXN1O15353 648 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 EPHX2P34913 555 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 U2AF1L5P0DN76 240 aaPredicted RBP11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 CTCFP49711 727 aaPredicted RBP11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 U2AF1Q01081 240 aaKnown RBP eCLIP11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 SYNE4Q8N205 404 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 PSMD1Q99460 953 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
PTPDC1-203ENST00000467049 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 PPP2R1AP30153 589 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 VEGFBP49765 207 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 HLFQ16534 295 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 CRY2Q49AN0 593 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 EAPPQ56P03 285 aaPredicted RBP11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 GPC2Q8N158 579 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 AIDAQ96BJ3 306 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
PTPDC1-203ENST00000467049 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 OLFM4Q6UX06 510 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 CLEC11AQ9Y240 323 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 RASSF10A6NK89 507 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 DCTN1Q14203 1278 aa11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 PNISRQ8TF01 805 aaKnown RBP11.91□□□□□ -0.5
PTPDC1-203ENST00000467049 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
PTPDC1-203ENST00000467049 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
PTPDC1-203ENST00000467049 GTF2E1P29083 439 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms