RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 AFDNP55196 1824 aaKnown RBP19.4■□□□□ 0.7
NPHP4-205ENST00000466897 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
NPHP4-205ENST00000466897 PLBD2Q8NHP8 589 aa19.4■□□□□ 0.7
NPHP4-205ENST00000466897 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
NPHP4-205ENST00000466897 BCL2L13Q9BXK5 485 aa19.4■□□□□ 0.7
NPHP4-205ENST00000466897 ZNF330Q9Y3S2 320 aaPredicted RBP19.4■□□□□ 0.7
NPHP4-205ENST00000466897 PXDNLA1KZ92 1463 aa19.4■□□□□ 0.7
NPHP4-205ENST00000466897 ZPR1O75312 459 aa19.39■□□□□ 0.69
NPHP4-205ENST00000466897 CLEC4GQ6UXB4 293 aa19.39■□□□□ 0.69
NPHP4-205ENST00000466897 TTLL7Q6ZT98 887 aa19.39■□□□□ 0.69
NPHP4-205ENST00000466897 G2E3Q7L622 706 aa19.39■□□□□ 0.69
NPHP4-205ENST00000466897 SLC16A10Q8TF71 515 aa19.39■□□□□ 0.69
NPHP4-205ENST00000466897 ADCY9O60503 1353 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 BCAR3O75815 825 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 ANKRD13DQ6ZTN6 518 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 ATP10DQ9P241 1426 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 ZNF652Q9Y2D9 606 aa19.38■□□□□ 0.69
NPHP4-205ENST00000466897 AIMP1Q12904 312 aaKnown RBP19.37■□□□□ 0.69
NPHP4-205ENST00000466897 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-205ENST00000466897 R3HDM1Q15032 1099 aaKnown RBP19.37■□□□□ 0.69
NPHP4-205ENST00000466897 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
NPHP4-205ENST00000466897 GIGYF2Q6Y7W6 1299 aaKnown RBP19.37■□□□□ 0.69
NPHP4-205ENST00000466897 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
NPHP4-205ENST00000466897 IPO8O15397 1037 aaKnown RBP19.36■□□□□ 0.69
NPHP4-205ENST00000466897 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
NPHP4-205ENST00000466897 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-205ENST00000466897 NRXN2Q9P2S2 1712 aa19.35■□□□□ 0.69
NPHP4-205ENST00000466897 GYS1P13807 737 aa19.35■□□□□ 0.69
NPHP4-205ENST00000466897 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
NPHP4-205ENST00000466897 API5Q9BZZ5 524 aaKnown RBP19.35■□□□□ 0.69
NPHP4-205ENST00000466897 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
NPHP4-205ENST00000466897 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
NPHP4-205ENST00000466897 NOB1Q9ULX3 412 aaKnown RBP19.35■□□□□ 0.69
NPHP4-205ENST00000466897 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
NPHP4-205ENST00000466897 RIC3Q7Z5B4 369 aa19.34■□□□□ 0.69
NPHP4-205ENST00000466897 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
NPHP4-205ENST00000466897 ZBTB3Q9H5J0 574 aa19.34■□□□□ 0.69
NPHP4-205ENST00000466897 HLFQ16534 295 aa19.33■□□□□ 0.68
NPHP4-205ENST00000466897 ATF7IPQ6VMQ6 1270 aa19.33■□□□□ 0.68
NPHP4-205ENST00000466897 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
NPHP4-205ENST00000466897 ARXQ96QS3 562 aa19.33■□□□□ 0.68
NPHP4-205ENST00000466897 METTL22Q9BUU2 404 aaPredicted RBP19.33■□□□□ 0.68
NPHP4-205ENST00000466897 MAP3K2Q9Y2U5 619 aa19.33■□□□□ 0.68
NPHP4-205ENST00000466897 MSH5O43196 834 aa19.32■□□□□ 0.68
NPHP4-205ENST00000466897 TCIRG1Q13488 830 aa19.32■□□□□ 0.68
NPHP4-205ENST00000466897 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
NPHP4-205ENST00000466897 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
NPHP4-205ENST00000466897 LRP5O75197 1615 aa19.32■□□□□ 0.68
NPHP4-205ENST00000466897 ABCC4O15439 1325 aa19.31■□□□□ 0.68
NPHP4-205ENST00000466897 PSDA5PKW4 1024 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-205ENST00000466897 TRIM28Q13263 835 aaKnown RBP19.31■□□□□ 0.68
NPHP4-205ENST00000466897 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-205ENST00000466897 PDGFDQ9GZP0 370 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-205ENST00000466897 MTFR1LQ9H019 292 aa19.31■□□□□ 0.68
NPHP4-205ENST00000466897 LAMB2P55268 1798 aa19.31■□□□□ 0.68
NPHP4-205ENST00000466897 CENPBP07199 599 aaPredicted RBP19.3■□□□□ 0.68
NPHP4-205ENST00000466897 TRIM27P14373 513 aa19.3■□□□□ 0.68
NPHP4-205ENST00000466897 FKBP8Q14318 412 aa19.3■□□□□ 0.68
NPHP4-205ENST00000466897 ZNF34Q8IZ26 560 aa19.3■□□□□ 0.68
NPHP4-205ENST00000466897 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
NPHP4-205ENST00000466897 CARMIL3Q8ND23 1372 aa19.3■□□□□ 0.68
NPHP4-205ENST00000466897 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
NPHP4-205ENST00000466897 TM4SF1P30408 202 aa19.29■□□□□ 0.68
NPHP4-205ENST00000466897 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
NPHP4-205ENST00000466897 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-205ENST00000466897 F6X3S4 739 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 MS4A1P11836 297 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
NPHP4-205ENST00000466897 NFIXQ14938 502 aa19.27■□□□□ 0.68
NPHP4-205ENST00000466897 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
NPHP4-205ENST00000466897 SETDB2Q96T68 719 aa19.27■□□□□ 0.68
NPHP4-205ENST00000466897 NIP7Q9Y221 180 aaKnown RBP eCLIP19.27■□□□□ 0.68
NPHP4-205ENST00000466897 UBN2Q6ZU65 1347 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 MYH3P11055 1940 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 CCT4P50991 539 aaKnown RBP19.26■□□□□ 0.67
NPHP4-205ENST00000466897 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 MYD88Q99836 296 aa19.26■□□□□ 0.67
NPHP4-205ENST00000466897 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
NPHP4-205ENST00000466897 PDE3AQ14432 1141 aa19.25■□□□□ 0.67
NPHP4-205ENST00000466897 INTS3Q68E01 1043 aaKnown RBP19.25■□□□□ 0.67
NPHP4-205ENST00000466897 NLRP10Q86W26 655 aa19.25■□□□□ 0.67
NPHP4-205ENST00000466897 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
NPHP4-205ENST00000466897 NEURL1BA8MQ27 555 aa19.24■□□□□ 0.67
NPHP4-205ENST00000466897 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
NPHP4-205ENST00000466897 SLC4A10Q6U841 1118 aa19.24■□□□□ 0.67
NPHP4-205ENST00000466897 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
NPHP4-205ENST00000466897 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
NPHP4-205ENST00000466897 RIC1Q4ADV7 1423 aa19.24■□□□□ 0.67
NPHP4-205ENST00000466897 ANKRD31Q8N7Z5 1873 aa19.23■□□□□ 0.67
NPHP4-205ENST00000466897 ZBTB7AO95365 584 aa19.23■□□□□ 0.67
NPHP4-205ENST00000466897 MMP10P09238 476 aa19.23■□□□□ 0.67
NPHP4-205ENST00000466897 DDR1Q08345 913 aa19.23■□□□□ 0.67
NPHP4-205ENST00000466897 PPP1R42Q7Z4L9 355 aa19.23■□□□□ 0.67
NPHP4-205ENST00000466897 FTSJ3Q8IY81 847 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms