RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 GRM8O00222 908 aa13.19□□□□□ -0.3
CMC1-205ENST00000466830 IL13P35225 146 aa13.19□□□□□ -0.3
CMC1-205ENST00000466830 ANO10Q9NW15 660 aa13.19□□□□□ -0.3
CMC1-205ENST00000466830 ZMYM3Q14202 1370 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
CMC1-205ENST00000466830 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
CMC1-205ENST00000466830 XAGE3Q8WTP9 111 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 CHRNA2Q15822 529 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 CEP131Q9UPN4 1083 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 RUFY1Q96T51 708 aa13.18□□□□□ -0.3
CMC1-205ENST00000466830 CTAGE5O15320 804 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 UBE2HP62256 183 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 CAGE1Q8TC20 777 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 ZNHIT6Q9NWK9 470 aaKnown RBP13.17□□□□□ -0.3
CMC1-205ENST00000466830 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
CMC1-205ENST00000466830 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 USP25Q9UHP3 1055 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
CMC1-205ENST00000466830 SLC5A1P13866 664 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 TRPM2O94759 1503 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 GUCY1B3Q02153 619 aa13.17□□□□□ -0.3
CMC1-205ENST00000466830 CCT2P78371 535 aaKnown RBP13.16□□□□□ -0.3
CMC1-205ENST00000466830 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
CMC1-205ENST00000466830 GPTP24298 496 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 ATP2B2Q01814 1243 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 ZSCAN22P10073 491 aaPredicted RBP13.16□□□□□ -0.3
CMC1-205ENST00000466830 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
CMC1-205ENST00000466830 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
CMC1-205ENST00000466830 AK7Q96M32 723 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 SNRKQ9NRH2 765 aa13.16□□□□□ -0.3
CMC1-205ENST00000466830 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 EXOC5O00471 708 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 RBM27Q9P2N5 1060 aaKnown RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 HOXC9P31274 260 aa13.15□□□□□ -0.3
CMC1-205ENST00000466830 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 RNF41Q9H4P4 317 aaPredicted RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
CMC1-205ENST00000466830 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.31
CMC1-205ENST00000466830 KDM6BO15054 1643 aa13.14□□□□□ -0.31
CMC1-205ENST00000466830 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
CMC1-205ENST00000466830 CHL1O00533 1208 aa13.14□□□□□ -0.31
CMC1-205ENST00000466830 SFPQP23246 707 aaKnown RBP eCLIP13.14□□□□□ -0.31
CMC1-205ENST00000466830 NPHP3Q7Z494 1330 aa13.14□□□□□ -0.31
CMC1-205ENST00000466830 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
CMC1-205ENST00000466830 KCNA6P17658 529 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
CMC1-205ENST00000466830 LRSAM1Q6UWE0 723 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 BRF1Q92994 677 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 USP26Q9BXU7 913 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.312e-9■□□□□ 11.3
CMC1-205ENST00000466830 MCM5P33992 734 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 RBM25P49756 843 aaKnown RBP13.13□□□□□ -0.31
CMC1-205ENST00000466830 UVSSAQ2YD98 709 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 PA2G4Q9UQ80 394 aaKnown RBP13.13□□□□□ -0.31
CMC1-205ENST00000466830 MSH6P52701 1360 aa13.13□□□□□ -0.31
CMC1-205ENST00000466830 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 GCP02774 474 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 PIBF1Q8WXW3 757 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 IP6K1Q92551 441 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 ZNF287Q9HBT7 754 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 BABAM1Q9NWV8 329 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 KIF2AO00139 706 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 CHMLP26374 656 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 HAND2P61296 217 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 CT47A1Q5JQC4 288 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 G2E3Q7L622 706 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
CMC1-205ENST00000466830 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
CMC1-205ENST00000466830 ZPR1O75312 459 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms