RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 GRM8O00222 908 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 GLRX3O76003 335 aaKnown RBP12.6□□□□□ -0.39
UFD1-206ENST00000466373 BRD1O95696 1058 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 PRIM1P49642 420 aaKnown RBP12.6□□□□□ -0.39
UFD1-206ENST00000466373 LSG1Q9H089 658 aaKnown RBP12.6□□□□□ -0.39
UFD1-206ENST00000466373 RGPD5Q99666 1765 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 ALDH1L1O75891 902 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 CSB-PGBD3P0DP91 1061 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 CHRNA2Q15822 529 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 KAZALD1Q96I82 304 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
UFD1-206ENST00000466373 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 TMEM63CQ9P1W3 806 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 SYCE3A1L190 88 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 PTH1RQ03431 593 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 PDIA6Q15084 440 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 DDX21Q9NR30 783 aaKnown RBP eCLIP12.59□□□□□ -0.39
UFD1-206ENST00000466373 ECHDC1Q9NTX5 307 aa12.59□□□□□ -0.39
UFD1-206ENST00000466373 ESPNB1AK53 854 aa12.58□□□□□ -0.39
UFD1-206ENST00000466373 AK2P54819 239 aa12.58□□□□□ -0.39
UFD1-206ENST00000466373 MTX1Q13505 466 aa12.58□□□□□ -0.39
UFD1-206ENST00000466373 LINS1Q8NG48 757 aa12.58□□□□□ -0.39
UFD1-206ENST00000466373 IGKV5-2P06315 115 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 ZNF445P59923 1031 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 INTS4Q96HW7 963 aaKnown RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 RBSNQ9H1K0 784 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 SASH1O94885 1247 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 XAGE3Q8WTP9 111 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
UFD1-206ENST00000466373 C19orf44Q9H6X5 657 aa12.58□□□□□ -0.4
UFD1-206ENST00000466373 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 G3BP1Q13283 466 aaKnown RBP eCLIP12.57□□□□□ -0.4
UFD1-206ENST00000466373 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
UFD1-206ENST00000466373 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
UFD1-206ENST00000466373 ADCK5Q3MIX3 580 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 GPATCH3Q96I76 525 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 MYD88Q99836 296 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 SLIT3O75094 1523 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
UFD1-206ENST00000466373 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 CLCN1P35523 988 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 FAM227BQ96M60 508 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 BOLA2Q9H3K6 86 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 ZNF142P52746 1687 aaPredicted RBP12.56□□□□□ -0.4
UFD1-206ENST00000466373 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
UFD1-206ENST00000466373 ATF3P18847 181 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 TCHHQ07283 1943 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
UFD1-206ENST00000466373 TATP17735 454 aaPredicted RBP12.56□□□□□ -0.4
UFD1-206ENST00000466373 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 ERC1Q8IUD2 1116 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
UFD1-206ENST00000466373 JAKMIP1Q96N16 626 aaKnown RBP12.56□□□□□ -0.4
UFD1-206ENST00000466373 LARGE1O95461 756 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 PHKG2P15735 406 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 KCNJ4P48050 445 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 NEXNQ0ZGT2 675 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 TTC14Q96N46 770 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 USP42Q9H9J4 1324 aaKnown RBP12.55□□□□□ -0.4
UFD1-206ENST00000466373 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
UFD1-206ENST00000466373 CCDC173Q0VFZ6 552 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
UFD1-206ENST00000466373 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
UFD1-206ENST00000466373 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
UFD1-206ENST00000466373 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
UFD1-206ENST00000466373 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 PTCD1O75127 700 aaKnown RBP12.54□□□□□ -0.4
UFD1-206ENST00000466373 EVI5LQ96CN4 794 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 EDC3Q96F86 508 aaKnown RBP12.54□□□□□ -0.4
UFD1-206ENST00000466373 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
UFD1-206ENST00000466373 NMIQ13287 307 aaPredicted RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 GCKRQ14397 625 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 USP48Q86UV5 1035 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 TCEANC2Q96MN5 208 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 MEGF6O75095 1541 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 RPAP1Q9BWH6 1393 aaPredicted RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 CYP27B1O15528 508 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
UFD1-206ENST00000466373 MBD3O95983 291 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
UFD1-206ENST00000466373 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms