RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 COPS6Q7L5N1 327 aa23.69■■□□□ 1.38
HOXA9-203ENST00000465941 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
HOXA9-203ENST00000465941 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
HOXA9-203ENST00000465941 KIF6Q6ZMV9 814 aa23.68■■□□□ 1.38
HOXA9-203ENST00000465941 PPP1R1BQ9UD71 204 aaPredicted RBP23.68■■□□□ 1.38
HOXA9-203ENST00000465941 ZNF652Q9Y2D9 606 aa23.68■■□□□ 1.38
HOXA9-203ENST00000465941 XAGE3Q8WTP9 111 aa23.67■■□□□ 1.38
HOXA9-203ENST00000465941 STK31Q9BXU1 1019 aa23.67■■□□□ 1.38
HOXA9-203ENST00000465941 NFIXQ14938 502 aa23.66■■□□□ 1.38
HOXA9-203ENST00000465941 AIMP1Q12904 312 aaKnown RBP23.65■■□□□ 1.38
HOXA9-203ENST00000465941 HLFQ16534 295 aa23.65■■□□□ 1.38
HOXA9-203ENST00000465941 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
HOXA9-203ENST00000465941 PARP3Q9Y6F1 533 aa23.65■■□□□ 1.38
HOXA9-203ENST00000465941 SCN7AQ01118 1682 aa23.64■■□□□ 1.38
HOXA9-203ENST00000465941 DDR1Q08345 913 aa23.64■■□□□ 1.37
HOXA9-203ENST00000465941 ZBTB3Q9H5J0 574 aa23.64■■□□□ 1.37
HOXA9-203ENST00000465941 POLRMTO00411 1230 aaKnown RBP23.63■■□□□ 1.37
HOXA9-203ENST00000465941 SLC4A2P04920 1241 aa23.63■■□□□ 1.37
HOXA9-203ENST00000465941 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
HOXA9-203ENST00000465941 PHAXQ9H814 394 aaKnown RBP23.63■■□□□ 1.37
HOXA9-203ENST00000465941 SRCAPQ6ZRS2 3230 aa23.62■■□□□ 1.37
HOXA9-203ENST00000465941 TCERG1O14776 1098 aaKnown RBP23.62■■□□□ 1.37
HOXA9-203ENST00000465941 ANKRD13DQ6ZTN6 518 aa23.62■■□□□ 1.37
HOXA9-203ENST00000465941 SETDB2Q96T68 719 aa23.62■■□□□ 1.37
HOXA9-203ENST00000465941 BCORQ6W2J9 1755 aa23.62■■□□□ 1.37
HOXA9-203ENST00000465941 CT47B1P0C2W7 299 aaPredicted RBP23.61■■□□□ 1.37
HOXA9-203ENST00000465941 BICDL1Q6ZP65 573 aa23.61■■□□□ 1.37
HOXA9-203ENST00000465941 PLBD2Q8NHP8 589 aa23.61■■□□□ 1.37
HOXA9-203ENST00000465941 ZNF428Q96B54 188 aa23.61■■□□□ 1.37
HOXA9-203ENST00000465941 FHDC1Q9C0D6 1143 aaPredicted RBP23.6■■□□□ 1.37
HOXA9-203ENST00000465941 SERPINB2P05120 415 aa23.59■■□□□ 1.37
HOXA9-203ENST00000465941 NIP7Q9Y221 180 aaKnown RBP eCLIP23.59■■□□□ 1.37
HOXA9-203ENST00000465941 CD2APQ9Y5K6 639 aa23.59■■□□□ 1.37
HOXA9-203ENST00000465941 CARMIL3Q8ND23 1372 aa23.59■■□□□ 1.37
HOXA9-203ENST00000465941 ZNF34Q8IZ26 560 aa23.58■■□□□ 1.37
HOXA9-203ENST00000465941 ATP10DQ9P241 1426 aa23.58■■□□□ 1.36
HOXA9-203ENST00000465941 DDX58O95786 925 aaKnown RBP23.57■■□□□ 1.36
HOXA9-203ENST00000465941 HSP90AB3PQ58FF7 597 aa23.57■■□□□ 1.36
HOXA9-203ENST00000465941 G2E3Q7L622 706 aa23.57■■□□□ 1.36
HOXA9-203ENST00000465941 SYT17Q9BSW7 474 aa23.57■■□□□ 1.36
HOXA9-203ENST00000465941 TCIRG1Q13488 830 aa23.56■■□□□ 1.36
HOXA9-203ENST00000465941 RIC3Q7Z5B4 369 aa23.56■■□□□ 1.36
HOXA9-203ENST00000465941 FLIIQ13045 1269 aa23.55■■□□□ 1.36
HOXA9-203ENST00000465941 ALDH1L2Q3SY69 923 aa23.54■■□□□ 1.36
HOXA9-203ENST00000465941 KSR2Q6VAB6 950 aa23.54■■□□□ 1.36
HOXA9-203ENST00000465941 GPTP24298 496 aa23.53■■□□□ 1.36
HOXA9-203ENST00000465941 KLHL34Q8N239 644 aa23.53■■□□□ 1.36
HOXA9-203ENST00000465941 NUP98P52948 1817 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 C10orf71Q711Q0 1435 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 PI4KAP2A4QPH2 592 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 TPTE2Q6XPS3 522 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 NBPF5PQ86XG9 351 aaPredicted RBP23.52■■□□□ 1.36
HOXA9-203ENST00000465941 MRPL50Q8N5N7 158 aaKnown RBP23.52■■□□□ 1.36
HOXA9-203ENST00000465941 PI4KAP1Q8N8J0 262 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 SSH1Q8WYL5 1049 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 UBN2Q6ZU65 1347 aa23.52■■□□□ 1.36
HOXA9-203ENST00000465941 NRXN2Q9P2S2 1712 aa23.51■■□□□ 1.35
HOXA9-203ENST00000465941 TRIM28Q13263 835 aaKnown RBP23.51■■□□□ 1.35
HOXA9-203ENST00000465941 PRR5LQ6MZQ0 368 aa23.51■■□□□ 1.35
HOXA9-203ENST00000465941 CNBD1Q8NA66 436 aa23.51■■□□□ 1.35
HOXA9-203ENST00000465941 TGFB2P61812 414 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 FKBP5Q13451 457 aaPredicted RBP23.5■■□□□ 1.35
HOXA9-203ENST00000465941 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 PPP1R42Q7Z4L9 355 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 ISCA1Q9BUE6 129 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 METTL22Q9BUU2 404 aaPredicted RBP23.5■■□□□ 1.35
HOXA9-203ENST00000465941 NYXQ9GZU5 481 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 MAP3K2Q9Y2U5 619 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 ADCY9O60503 1353 aa23.5■■□□□ 1.35
HOXA9-203ENST00000465941 NLRP10Q86W26 655 aa23.49■■□□□ 1.35
HOXA9-203ENST00000465941 IBTKQ9P2D0 1353 aaPredicted RBP23.49■■□□□ 1.35
HOXA9-203ENST00000465941 NPHP1O15259 732 aa23.48■■□□□ 1.35
HOXA9-203ENST00000465941 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
HOXA9-203ENST00000465941 NLGN2Q8NFZ4 835 aa23.48■■□□□ 1.35
HOXA9-203ENST00000465941 BRIP1Q9BX63 1249 aa23.48■■□□□ 1.35
HOXA9-203ENST00000465941 CACNA1FO60840 1977 aa23.48■■□□□ 1.35
HOXA9-203ENST00000465941 FAM177BA6PVY3 158 aa23.47■■□□□ 1.35
HOXA9-203ENST00000465941 ATP5J2-PTCD1G3V325 749 aa23.47■■□□□ 1.35
HOXA9-203ENST00000465941 BRPF1P55201 1214 aaPredicted RBP23.47■■□□□ 1.35
HOXA9-203ENST00000465941 ST5P78524 1137 aa23.47■■□□□ 1.35
HOXA9-203ENST00000465941 UTP14AQ9BVJ6 771 aaKnown RBP23.47■■□□□ 1.35
HOXA9-203ENST00000465941 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
HOXA9-203ENST00000465941 NTSR2O95665 410 aa23.46■■□□□ 1.35
HOXA9-203ENST00000465941 MYD88Q99836 296 aa23.46■■□□□ 1.35
HOXA9-203ENST00000465941 BCL2L13Q9BXK5 485 aa23.46■■□□□ 1.35
HOXA9-203ENST00000465941 KIF13BQ9NQT8 1826 aa23.46■■□□□ 1.35
HOXA9-203ENST00000465941 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
HOXA9-203ENST00000465941 RNF123Q5XPI4 1314 aa23.45■■□□□ 1.34
HOXA9-203ENST00000465941 GTF2E1P29083 439 aaPredicted RBP23.45■■□□□ 1.34
HOXA9-203ENST00000465941 DNAAF4Q8WXU2 420 aa23.45■■□□□ 1.34
HOXA9-203ENST00000465941 ARFGEF2Q9Y6D5 1785 aa23.45■■□□□ 1.34
HOXA9-203ENST00000465941 PTPRCP08575 1304 aa23.44■■□□□ 1.34
HOXA9-203ENST00000465941 PDE6BP35913 854 aa23.44■■□□□ 1.34
HOXA9-203ENST00000465941 NEXNQ0ZGT2 675 aa23.44■■□□□ 1.34
HOXA9-203ENST00000465941 CCDC24Q8N4L8 307 aa23.44■■□□□ 1.34
HOXA9-203ENST00000465941 CCDC191Q8NCU4 936 aa23.44■■□□□ 1.34
HOXA9-203ENST00000465941 A0A0G2JLW4 131 aa23.43■■□□□ 1.34
HOXA9-203ENST00000465941 ERFEQ4G0M1 354 aa23.43■■□□□ 1.34
HOXA9-203ENST00000465941 NUTM1Q86Y26 1132 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms