RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 RPS6KA4O75676 772 aa21.85■■□□□ 1.09
PTPRU-206ENST00000465525 IL6STP40189 918 aaPredicted RBP21.85■■□□□ 1.09
PTPRU-206ENST00000465525 MAP3K2Q9Y2U5 619 aa21.85■■□□□ 1.09
PTPRU-206ENST00000465525 GNPATO15228 680 aa21.85■■□□□ 1.09
PTPRU-206ENST00000465525 ITPRIPQ8IWB1 547 aa21.85■■□□□ 1.09
PTPRU-206ENST00000465525 AKT1S1Q96B36 256 aa21.85■■□□□ 1.09
PTPRU-206ENST00000465525 N4BP2Q86UW6 1770 aaPredicted RBP21.84■■□□□ 1.09
PTPRU-206ENST00000465525 DDX58O95786 925 aaKnown RBP21.84■■□□□ 1.09
PTPRU-206ENST00000465525 MS4A1P11836 297 aa21.84■■□□□ 1.09
PTPRU-206ENST00000465525 KSR2Q6VAB6 950 aa21.84■■□□□ 1.09
PTPRU-206ENST00000465525 RIC3Q7Z5B4 369 aa21.84■■□□□ 1.09
PTPRU-206ENST00000465525 NPM2Q86SE8 214 aaKnown RBP21.84■■□□□ 1.09
PTPRU-206ENST00000465525 ZBTB3Q9H5J0 574 aa21.84■■□□□ 1.09
PTPRU-206ENST00000465525 RTCBQ9Y3I0 505 aaKnown RBP21.84■■□□□ 1.09
PTPRU-206ENST00000465525 EIF5P55010 431 aaKnown RBP21.83■■□□□ 1.09
PTPRU-206ENST00000465525 ANKRD13DQ6ZTN6 518 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 AMIGO3Q86WK7 504 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 DNAAF4Q8WXU2 420 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 STK32BQ9NY57 414 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 TBC1D2BQ9UPU7 963 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 UBR3Q6ZT12 1888 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 MVPQ14764 893 aaKnown RBP21.82■■□□□ 1.08
PTPRU-206ENST00000465525 SLC15A2Q16348 729 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 ZNF827Q17R98 1081 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 TFCP2L1Q9NZI6 479 aa21.82■■□□□ 1.08
PTPRU-206ENST00000465525 AFDNP55196 1824 aaKnown RBP21.81■■□□□ 1.08
PTPRU-206ENST00000465525 COL15A1P39059 1388 aa21.81■■□□□ 1.08
PTPRU-206ENST00000465525 KIF6Q6ZMV9 814 aa21.81■■□□□ 1.08
PTPRU-206ENST00000465525 PLBD2Q8NHP8 589 aa21.81■■□□□ 1.08
PTPRU-206ENST00000465525 DZIP3Q86Y13 1208 aaKnown RBP21.8■■□□□ 1.08
PTPRU-206ENST00000465525 A0A087WZG4 1122 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 PHF14O94880 888 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 ADRA2BP18089 450 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 SSFA2P28290 1259 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 TRAPPC3LQ5T215 181 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
PTPRU-206ENST00000465525 NUP98P52948 1817 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 TUBGCP6Q96RT7 1819 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 PXDNLA1KZ92 1463 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 INTS3Q68E01 1043 aaKnown RBP21.79■■□□□ 1.08
PTPRU-206ENST00000465525 MYD88Q99836 296 aa21.79■■□□□ 1.08
PTPRU-206ENST00000465525 C4AP0C0L4 1744 aa21.78■■□□□ 1.08
PTPRU-206ENST00000465525 SOCS7O14512 581 aa21.78■■□□□ 1.08
PTPRU-206ENST00000465525 FLAD1Q8NFF5 587 aa21.78■■□□□ 1.08
PTPRU-206ENST00000465525 MAP3K15Q6ZN16 1313 aa21.78■■□□□ 1.08
PTPRU-206ENST00000465525 BCORQ6W2J9 1755 aa21.77■■□□□ 1.08
PTPRU-206ENST00000465525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
PTPRU-206ENST00000465525 CCT4P50991 539 aaKnown RBP21.77■■□□□ 1.08
PTPRU-206ENST00000465525 HLFQ16534 295 aa21.77■■□□□ 1.08
PTPRU-206ENST00000465525 CWF19L2Q2TBE0 894 aaKnown RBP21.77■■□□□ 1.08
PTPRU-206ENST00000465525 BEND3Q5T5X7 828 aa21.77■■□□□ 1.08
PTPRU-206ENST00000465525 METTL22Q9BUU2 404 aaPredicted RBP21.77■■□□□ 1.08
PTPRU-206ENST00000465525 ATP5J2-PTCD1G3V325 749 aa21.76■■□□□ 1.07
PTPRU-206ENST00000465525 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
PTPRU-206ENST00000465525 ANKRD36CQ5JPF3 1778 aa21.76■■□□□ 1.07
PTPRU-206ENST00000465525 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
PTPRU-206ENST00000465525 RFC4P35249 363 aa21.75■■□□□ 1.07
PTPRU-206ENST00000465525 DDX19BQ9UMR2 479 aa21.75■■□□□ 1.07
PTPRU-206ENST00000465525 IGKV5-2P06315 115 aa21.74■■□□□ 1.07
PTPRU-206ENST00000465525 SCN7AQ01118 1682 aa21.74■■□□□ 1.07
PTPRU-206ENST00000465525 NEXNQ0ZGT2 675 aa21.74■■□□□ 1.07
PTPRU-206ENST00000465525 ATP10DQ9P241 1426 aa21.74■■□□□ 1.07
PTPRU-206ENST00000465525 SRP68Q9UHB9 627 aaKnown RBP21.74■■□□□ 1.07
PTPRU-206ENST00000465525 CAMTA2O94983 1202 aa21.73■■□□□ 1.07
PTPRU-206ENST00000465525 NARFQ9UHQ1 456 aa21.73■■□□□ 1.07
PTPRU-206ENST00000465525 PNPLA7Q6ZV29 1317 aa21.73■■□□□ 1.07
PTPRU-206ENST00000465525 ZBTB7BO15156 539 aaPredicted RBP21.72■■□□□ 1.07
PTPRU-206ENST00000465525 LINS1Q8NG48 757 aa21.72■■□□□ 1.07
PTPRU-206ENST00000465525 MEIS3Q99687 375 aa21.72■■□□□ 1.07
PTPRU-206ENST00000465525 ERVV-1B6SEH8 477 aa21.72■■□□□ 1.07
PTPRU-206ENST00000465525 ZPR1O75312 459 aa21.72■■□□□ 1.07
PTPRU-206ENST00000465525 GIGYF2Q6Y7W6 1299 aaKnown RBP21.72■■□□□ 1.07
PTPRU-206ENST00000465525 COL23A1Q86Y22 540 aaPredicted RBP21.72■■□□□ 1.07
PTPRU-206ENST00000465525 NEURL1BA8MQ27 555 aa21.71■■□□□ 1.07
PTPRU-206ENST00000465525 GPTP24298 496 aa21.71■■□□□ 1.07
PTPRU-206ENST00000465525 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
PTPRU-206ENST00000465525 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
PTPRU-206ENST00000465525 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
PTPRU-206ENST00000465525 RGL2O15211 777 aa21.69■■□□□ 1.06
PTPRU-206ENST00000465525 MSH5O43196 834 aa21.69■■□□□ 1.06
PTPRU-206ENST00000465525 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
PTPRU-206ENST00000465525 JARID2Q92833 1246 aaPredicted RBP21.69■■□□□ 1.06
PTPRU-206ENST00000465525 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
PTPRU-206ENST00000465525 USP44Q9H0E7 712 aa21.69■■□□□ 1.06
PTPRU-206ENST00000465525 ZBTB40Q9NUA8 1239 aa21.69■■□□□ 1.06
PTPRU-206ENST00000465525 CLEC4GQ6UXB4 293 aa21.68■■□□□ 1.06
PTPRU-206ENST00000465525 QSER1Q2KHR3 1735 aa21.68■■□□□ 1.06
PTPRU-206ENST00000465525 GCKRQ14397 625 aa21.67■■□□□ 1.06
PTPRU-206ENST00000465525 ISCA1Q9BUE6 129 aa21.67■■□□□ 1.06
PTPRU-206ENST00000465525 BCL2L12Q9HB09 334 aa21.67■■□□□ 1.06
PTPRU-206ENST00000465525 ZNF652Q9Y2D9 606 aa21.67■■□□□ 1.06
PTPRU-206ENST00000465525 NBPF7P0C2Y1 421 aaPredicted RBP21.66■■□□□ 1.06
PTPRU-206ENST00000465525 R3HDM1Q15032 1099 aaKnown RBP21.66■■□□□ 1.06
PTPRU-206ENST00000465525 C9orf78Q9NZ63 289 aaPredicted RBP21.66■■□□□ 1.06
PTPRU-206ENST00000465525 HSP90AB3PQ58FF7 597 aa21.66■■□□□ 1.06
PTPRU-206ENST00000465525 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
PTPRU-206ENST00000465525 ERICH6BQ5W0A0 696 aa21.66■■□□□ 1.06
PTPRU-206ENST00000465525 BICDL1Q6ZP65 573 aa21.66■■□□□ 1.06
PTPRU-206ENST00000465525 UBN2Q6ZU65 1347 aa21.65■■□□□ 1.06
PTPRU-206ENST00000465525 GYS1P13807 737 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms