RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 HACL1Q9UJ83 578 aa20.58■□□□□ 0.89
HDAC6-214ENST00000465269 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
HDAC6-214ENST00000465269 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
HDAC6-214ENST00000465269 SRGNP10124 158 aa20.56■□□□□ 0.88
HDAC6-214ENST00000465269 AKAP4Q5JQC9 854 aa20.56■□□□□ 0.88
HDAC6-214ENST00000465269 CYP4F22Q6NT55 531 aa20.56■□□□□ 0.88
HDAC6-214ENST00000465269 CNKSR1Q969H4 720 aa20.56■□□□□ 0.88
HDAC6-214ENST00000465269 SCN7AQ01118 1682 aa20.55■□□□□ 0.88
HDAC6-214ENST00000465269 STYK1Q6J9G0 422 aa20.55■□□□□ 0.88
HDAC6-214ENST00000465269 CAPNS2Q96L46 248 aa20.55■□□□□ 0.88
HDAC6-214ENST00000465269 MRC1P22897 1456 aa20.55■□□□□ 0.88
HDAC6-214ENST00000465269 NPHP1O15259 732 aa20.54■□□□□ 0.88
HDAC6-214ENST00000465269 CNBD1Q8NA66 436 aa20.54■□□□□ 0.88
HDAC6-214ENST00000465269 C7orf43Q8WVR3 580 aa20.54■□□□□ 0.88
HDAC6-214ENST00000465269 PDZRN3Q9UPQ7 1066 aa20.53■□□□□ 0.88
HDAC6-214ENST00000465269 AOC2O75106 756 aa20.52■□□□□ 0.88
HDAC6-214ENST00000465269 MASTLQ96GX5 879 aa20.52■□□□□ 0.88
HDAC6-214ENST00000465269 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
HDAC6-214ENST00000465269 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
HDAC6-214ENST00000465269 IL13P35225 146 aa20.51■□□□□ 0.87
HDAC6-214ENST00000465269 CCDC93Q567U6 631 aa20.51■□□□□ 0.87
HDAC6-214ENST00000465269 GPR101Q96P66 508 aaPredicted RBP20.51■□□□□ 0.87
HDAC6-214ENST00000465269 MCOLN1Q9GZU1 580 aa20.51■□□□□ 0.87
HDAC6-214ENST00000465269 THSD7BQ9C0I4 1608 aa20.51■□□□□ 0.87
HDAC6-214ENST00000465269 UBR2Q8IWV8 1755 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 A0A087WZG4 1122 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 TRAF5O00463 557 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 STARD3NLO95772 234 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 HMOX1P09601 288 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
HDAC6-214ENST00000465269 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 SETDB2Q96T68 719 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
HDAC6-214ENST00000465269 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
HDAC6-214ENST00000465269 CAMTA2O94983 1202 aa20.49■□□□□ 0.87
HDAC6-214ENST00000465269 ST5P78524 1137 aa20.49■□□□□ 0.87
HDAC6-214ENST00000465269 SOGA3Q5TF21 947 aa20.49■□□□□ 0.87
HDAC6-214ENST00000465269 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
HDAC6-214ENST00000465269 LTBP1Q14766 1721 aa20.49■□□□□ 0.87
HDAC6-214ENST00000465269 A1BGP04217 495 aa20.48■□□□□ 0.87
HDAC6-214ENST00000465269 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-214ENST00000465269 PNMA8AQ86V59 439 aaPredicted RBP20.48■□□□□ 0.87
HDAC6-214ENST00000465269 MTHFSDQ2M296 383 aaKnown RBP20.47■□□□□ 0.87
HDAC6-214ENST00000465269 CST9Q5W186 159 aa20.47■□□□□ 0.87
HDAC6-214ENST00000465269 GJA3Q9Y6H8 435 aa20.47■□□□□ 0.87
HDAC6-214ENST00000465269 MORC1Q86VD1 984 aa20.46■□□□□ 0.87
HDAC6-214ENST00000465269 PANK3Q9H999 370 aa20.46■□□□□ 0.87
HDAC6-214ENST00000465269 COL4A5P29400 1685 aa20.45■□□□□ 0.86
HDAC6-214ENST00000465269 FZD9O00144 591 aa20.45■□□□□ 0.86
HDAC6-214ENST00000465269 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
HDAC6-214ENST00000465269 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
HDAC6-214ENST00000465269 SYNE4Q8N205 404 aa20.45■□□□□ 0.86
HDAC6-214ENST00000465269 IARSP41252 1262 aaKnown RBP20.44■□□□□ 0.86
HDAC6-214ENST00000465269 EPS15P42566 896 aa20.44■□□□□ 0.86
HDAC6-214ENST00000465269 FAM177BA6PVY3 158 aa20.43■□□□□ 0.86
HDAC6-214ENST00000465269 ECE1P42892 770 aa20.43■□□□□ 0.86
HDAC6-214ENST00000465269 NBPF5PQ86XG9 351 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-214ENST00000465269 GPC2Q8N158 579 aa20.43■□□□□ 0.86
HDAC6-214ENST00000465269 HEG1Q9ULI3 1381 aa20.43■□□□□ 0.86
HDAC6-214ENST00000465269 NPR1P16066 1061 aa20.42■□□□□ 0.86
HDAC6-214ENST00000465269 IL6STP40189 918 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-214ENST00000465269 DGKZQ13574 1117 aa20.42■□□□□ 0.86
HDAC6-214ENST00000465269 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
HDAC6-214ENST00000465269 KCNQ3O43525 872 aa20.4■□□□□ 0.86
HDAC6-214ENST00000465269 SCNN1DP51172 638 aa20.4■□□□□ 0.86
HDAC6-214ENST00000465269 BCORQ6W2J9 1755 aa20.4■□□□□ 0.86
HDAC6-214ENST00000465269 TLL2Q9Y6L7 1015 aa20.4■□□□□ 0.86
HDAC6-214ENST00000465269 SOX10P56693 466 aa20.39■□□□□ 0.85
HDAC6-214ENST00000465269 ZNF790Q6PG37 636 aa20.39■□□□□ 0.85
HDAC6-214ENST00000465269 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.85
HDAC6-214ENST00000465269 TRPM7Q96QT4 1865 aa20.39■□□□□ 0.85
HDAC6-214ENST00000465269 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
HDAC6-214ENST00000465269 PRAMEF22A3QJZ6 481 aa20.37■□□□□ 0.85
HDAC6-214ENST00000465269 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-214ENST00000465269 IL17REQ8NFR9 667 aa20.37■□□□□ 0.85
HDAC6-214ENST00000465269 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
HDAC6-214ENST00000465269 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
HDAC6-214ENST00000465269 MAP2K2P36507 400 aa20.36■□□□□ 0.85
HDAC6-214ENST00000465269 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
HDAC6-214ENST00000465269 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
HDAC6-214ENST00000465269 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
HDAC6-214ENST00000465269 EIF6P56537 245 aaKnown RBP20.35■□□□□ 0.85
HDAC6-214ENST00000465269 SAPCD2Q86UD0 394 aa20.35■□□□□ 0.85
HDAC6-214ENST00000465269 CELF2O95319 508 aaKnown RBP20.34■□□□□ 0.85
HDAC6-214ENST00000465269 TEFQ10587 303 aa20.34■□□□□ 0.85
HDAC6-214ENST00000465269 TEX13AQ9BXU3 409 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-214ENST00000465269 USP16Q9Y5T5 823 aa20.34■□□□□ 0.85
HDAC6-214ENST00000465269 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
HDAC6-214ENST00000465269 GLIS2Q9BZE0 524 aaPredicted RBP20.33■□□□□ 0.85
HDAC6-214ENST00000465269 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.85
HDAC6-214ENST00000465269 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
HDAC6-214ENST00000465269 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
HDAC6-214ENST00000465269 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
HDAC6-214ENST00000465269 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
HDAC6-214ENST00000465269 PSMD1Q99460 953 aa20.31■□□□□ 0.84
HDAC6-214ENST00000465269 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
HDAC6-214ENST00000465269 DLK2Q6UY11 383 aa20.3■□□□□ 0.84
HDAC6-214ENST00000465269 TPTE2Q6XPS3 522 aa20.3■□□□□ 0.84
HDAC6-214ENST00000465269 USP50Q70EL3 339 aaPredicted RBP20.3■□□□□ 0.84
HDAC6-214ENST00000465269 ABCC12Q96J65 1359 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms