RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 TTLL7Q6ZT98 887 aa17■□□□□ 0.31
ATF3-208ENST00000465155 COG6Q9Y2V7 657 aa17■□□□□ 0.31
ATF3-208ENST00000465155 N4BP2Q86UW6 1770 aaPredicted RBP17■□□□□ 0.31
ATF3-208ENST00000465155 BAG6P46379 1132 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 EIF5P55010 431 aaKnown RBP16.99■□□□□ 0.31
ATF3-208ENST00000465155 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 ARXQ96QS3 562 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 GNPATO15228 680 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 EZH2Q15910 746 aaKnown RBP16.99■□□□□ 0.31
ATF3-208ENST00000465155 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 AK7Q96M32 723 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
ATF3-208ENST00000465155 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 COL15A1P39059 1388 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 HMGB2P26583 209 aaKnown RBP16.98■□□□□ 0.31
ATF3-208ENST00000465155 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
ATF3-208ENST00000465155 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 ITPRIPQ8IWB1 547 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
ATF3-208ENST00000465155 DEFB132Q7Z7B7 95 aa16.97■□□□□ 0.31
ATF3-208ENST00000465155 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
ATF3-208ENST00000465155 EXOC6Q8TAG9 804 aa16.97■□□□□ 0.31
ATF3-208ENST00000465155 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
ATF3-208ENST00000465155 INTS3Q68E01 1043 aaKnown RBP16.96■□□□□ 0.31
ATF3-208ENST00000465155 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
ATF3-208ENST00000465155 MAP3K15Q6ZN16 1313 aa16.96■□□□□ 0.31
ATF3-208ENST00000465155 CCT4P50991 539 aaKnown RBP16.96■□□□□ 0.3
ATF3-208ENST00000465155 SMIM5Q71RC9 77 aa16.96■□□□□ 0.3
ATF3-208ENST00000465155 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
ATF3-208ENST00000465155 NUP98P52948 1817 aa16.95■□□□□ 0.3
ATF3-208ENST00000465155 AFDNP55196 1824 aaKnown RBP16.95■□□□□ 0.3
ATF3-208ENST00000465155 AMIGO3Q86WK7 504 aa16.95■□□□□ 0.3
ATF3-208ENST00000465155 GTF3C3Q9Y5Q9 886 aa16.95■□□□□ 0.3
ATF3-208ENST00000465155 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
ATF3-208ENST00000465155 A0A087WZG4 1122 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 PHF14O94880 888 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 MYD88Q99836 296 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 METTL22Q9BUU2 404 aaPredicted RBP16.94■□□□□ 0.3
ATF3-208ENST00000465155 ATP10DQ9P241 1426 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 DDX19BQ9UMR2 479 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 TUBGCP6Q96RT7 1819 aa16.94■□□□□ 0.3
ATF3-208ENST00000465155 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
ATF3-208ENST00000465155 ANKRD36CQ5JPF3 1778 aa16.93■□□□□ 0.3
ATF3-208ENST00000465155 HLFQ16534 295 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 ZNF827Q17R98 1081 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 ERVV-1B6SEH8 477 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
ATF3-208ENST00000465155 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 GIGYF2Q6Y7W6 1299 aaKnown RBP16.92■□□□□ 0.3
ATF3-208ENST00000465155 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 ARHGEF1Q92888 912 aaKnown RBP16.92■□□□□ 0.3
ATF3-208ENST00000465155 UPF1Q92900 1129 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATF3-208ENST00000465155 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
ATF3-208ENST00000465155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.91■□□□□ 0.3
ATF3-208ENST00000465155 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
ATF3-208ENST00000465155 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
ATF3-208ENST00000465155 ZBTB7BO15156 539 aaPredicted RBP16.9■□□□□ 0.3
ATF3-208ENST00000465155 SSFA2P28290 1259 aa16.9■□□□□ 0.3
ATF3-208ENST00000465155 RFC4P35249 363 aa16.9■□□□□ 0.3
ATF3-208ENST00000465155 NEURL1BA8MQ27 555 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 TCIRG1Q13488 830 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
ATF3-208ENST00000465155 ZPR1O75312 459 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 CHMP4BQ9H444 224 aaKnown RBP16.88■□□□□ 0.29
ATF3-208ENST00000465155 SRP68Q9UHB9 627 aaKnown RBP16.88■□□□□ 0.29
ATF3-208ENST00000465155 MEIS3Q99687 375 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 ANO8Q9HCE9 1232 aaPredicted RBP16.88■□□□□ 0.29
ATF3-208ENST00000465155 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
ATF3-208ENST00000465155 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
ATF3-208ENST00000465155 GPTP24298 496 aa16.87■□□□□ 0.29
ATF3-208ENST00000465155 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
ATF3-208ENST00000465155 USP44Q9H0E7 712 aa16.87■□□□□ 0.29
ATF3-208ENST00000465155 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
ATF3-208ENST00000465155 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
ATF3-208ENST00000465155 QSER1Q2KHR3 1735 aa16.86■□□□□ 0.29
ATF3-208ENST00000465155 GCKRQ14397 625 aa16.86■□□□□ 0.29
ATF3-208ENST00000465155 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
ATF3-208ENST00000465155 CLEC4GQ6UXB4 293 aa16.86■□□□□ 0.29
ATF3-208ENST00000465155 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
ATF3-208ENST00000465155 C9orf78Q9NZ63 289 aaPredicted RBP16.86■□□□□ 0.29
ATF3-208ENST00000465155 AAMPQ13685 434 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms