RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, human

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RERE-208	ENST00000465125	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.26	■■■□□ 2.59
RERE-208	ENST00000465125	MAP3K15	Q6ZN16	1313 aa		31.25	■■■□□ 2.59
RERE-208	ENST00000465125	CAMTA2	O94983	1202 aa		31.25	■■■□□ 2.59
RERE-208	ENST00000465125	USPL1	Q5W0Q7	1092 aa		31.25	■■■□□ 2.59
RERE-208	ENST00000465125	DDX58	O95786	925 aa	Known RBP	31.24	■■■□□ 2.59
RERE-208	ENST00000465125	ZBTB3	Q9H5J0	574 aa		31.24	■■■□□ 2.59
RERE-208	ENST00000465125	SLC16A10	Q8TF71	515 aa		31.23	■■■□□ 2.59
RERE-208	ENST00000465125	ERVV-1	B6SEH8	477 aa		31.22	■■■□□ 2.59
RERE-208	ENST00000465125	FKBP5	Q13451	457 aa	Predicted RBP	31.22	■■■□□ 2.59
RERE-208	ENST00000465125	RCAN3	Q9UKA8	241 aa		31.22	■■■□□ 2.59
RERE-208	ENST00000465125	ZNF652	Q9Y2D9	606 aa		31.22	■■■□□ 2.59
RERE-208	ENST00000465125	GYS1	P13807	737 aa		31.21	■■■□□ 2.59
RERE-208	ENST00000465125	ANKRD13D	Q6ZTN6	518 aa		31.21	■■■□□ 2.59
RERE-208	ENST00000465125	PLBD2	Q8NHP8	589 aa		31.21	■■■□□ 2.59
RERE-208	ENST00000465125	KIF16B	Q96L93	1317 aa		31.21	■■■□□ 2.59
RERE-208	ENST00000465125	RGL2	O15211	777 aa		31.2	■■■□□ 2.59
RERE-208	ENST00000465125	BCAR3	O75815	825 aa		31.2	■■■□□ 2.59
RERE-208	ENST00000465125	BRPF1	P55201	1214 aa	Predicted RBP	31.2	■■■□□ 2.59
RERE-208	ENST00000465125	RIC3	Q7Z5B4	369 aa		31.19	■■■□□ 2.58
RERE-208	ENST00000465125	ARFGEF2	Q9Y6D5	1785 aa		31.19	■■■□□ 2.58
RERE-208	ENST00000465125	BCL2L12	Q9HB09	334 aa		31.18	■■■□□ 2.58
RERE-208	ENST00000465125	PTPRC	P08575	1304 aa		31.18	■■■□□ 2.58
RERE-208	ENST00000465125	HLF	Q16534	295 aa		31.17	■■■□□ 2.58
RERE-208	ENST00000465125	MSL1	Q68DK7	614 aa		31.17	■■■□□ 2.58
RERE-208	ENST00000465125	CLEC4G	Q6UXB4	293 aa		31.17	■■■□□ 2.58
RERE-208	ENST00000465125	KSR2	Q6VAB6	950 aa		31.17	■■■□□ 2.58
RERE-208	ENST00000465125	GIGYF2	Q6Y7W6	1299 aa	Known RBP	31.17	■■■□□ 2.58
RERE-208	ENST00000465125	NUP98	P52948	1817 aa		31.17	■■■□□ 2.58
RERE-208	ENST00000465125	ZBTB7A	O95365	584 aa		31.16	■■■□□ 2.58
RERE-208	ENST00000465125	FKBP8	Q14318	412 aa		31.16	■■■□□ 2.58
RERE-208	ENST00000465125	NLGN1	Q8N2Q7	840 aa		31.16	■■■□□ 2.58
RERE-208	ENST00000465125	ADCY9	O60503	1353 aa		31.16	■■■□□ 2.58
RERE-208	ENST00000465125	PI4KAP2	A4QPH2	592 aa		31.15	■■■□□ 2.58
RERE-208	ENST00000465125	PI4KAP1	Q8N8J0	262 aa		31.15	■■■□□ 2.58
RERE-208	ENST00000465125	MTFR1L	Q9H019	292 aa		31.15	■■■□□ 2.58
RERE-208	ENST00000465125	NOB1	Q9ULX3	412 aa	Known RBP	31.15	■■■□□ 2.58
RERE-208	ENST00000465125	MAP3K2	Q9Y2U5	619 aa		31.15	■■■□□ 2.58
RERE-208	ENST00000465125	HSP90AB3P	Q58FF7	597 aa		31.14	■■■□□ 2.58
RERE-208	ENST00000465125	ATP10D	Q9P241	1426 aa		31.14	■■■□□ 2.58
RERE-208	ENST00000465125	ANKRD36C	Q5JPF3	1778 aa		31.12	■■■□□ 2.57
RERE-208	ENST00000465125	FRAT1	Q92837	279 aa	Predicted RBP	31.12	■■■□□ 2.57
RERE-208	ENST00000465125	IPO8	O15397	1037 aa	Known RBP	31.11	■■■□□ 2.57
RERE-208	ENST00000465125	TBC1D9B	Q66K14	1250 aa		31.11	■■■□□ 2.57
RERE-208	ENST00000465125	DNAAF4	Q8WXU2	420 aa		31.11	■■■□□ 2.57
RERE-208	ENST00000465125	BICDL1	Q6ZP65	573 aa		31.1	■■■□□ 2.57
RERE-208	ENST00000465125	API5	Q9BZZ5	524 aa	Known RBP	31.1	■■■□□ 2.57
RERE-208	ENST00000465125	ATF5	Q9Y2D1	282 aa	Predicted RBP	31.1	■■■□□ 2.57
RERE-208	ENST00000465125		F6X3S4	739 aa		31.09	■■■□□ 2.57
RERE-208	ENST00000465125	TCIRG1	Q13488	830 aa		31.09	■■■□□ 2.57
RERE-208	ENST00000465125	METTL22	Q9BUU2	404 aa	Predicted RBP	31.09	■■■□□ 2.57
RERE-208	ENST00000465125	NIP7	Q9Y221	180 aa	Known RBP eCLIP	31.09	■■■□□ 2.57
RERE-208	ENST00000465125	COL24A1	Q17RW2	1714 aa		31.09	■■■□□ 2.57
RERE-208	ENST00000465125	NEXN	Q0ZGT2	675 aa		31.08	■■■□□ 2.57
RERE-208	ENST00000465125	NFIX	Q14938	502 aa		31.08	■■■□□ 2.57
RERE-208	ENST00000465125	ARHGAP45	Q92619	1136 aa		31.08	■■■□□ 2.57
RERE-208	ENST00000465125	MYD88	Q99836	296 aa		31.08	■■■□□ 2.57
RERE-208	ENST00000465125	MMP10	P09238	476 aa		31.07	■■■□□ 2.56
RERE-208	ENST00000465125	GPT	P24298	496 aa		31.07	■■■□□ 2.56
RERE-208	ENST00000465125	ZKSCAN2	Q63HK3	967 aa		31.07	■■■□□ 2.56
RERE-208	ENST00000465125	SETDB2	Q96T68	719 aa		31.07	■■■□□ 2.56
RERE-208	ENST00000465125	CARMIL3	Q8ND23	1372 aa		31.06	■■■□□ 2.56
RERE-208	ENST00000465125	TM4SF1	P30408	202 aa		31.06	■■■□□ 2.56
RERE-208	ENST00000465125	ZNF34	Q8IZ26	560 aa		31.06	■■■□□ 2.56
RERE-208	ENST00000465125	POLD1	P28340	1107 aa		31.05	■■■□□ 2.56
RERE-208	ENST00000465125	ATF7IP	Q6VMQ6	1270 aa		31.05	■■■□□ 2.56
RERE-208	ENST00000465125	SPON1	Q9HCB6	807 aa		31.05	■■■□□ 2.56
RERE-208	ENST00000465125	PXDNL	A1KZ92	1463 aa		31.05	■■■□□ 2.56
RERE-208	ENST00000465125	ATP5J2-PTCD1	G3V325	749 aa		31.04	■■■□□ 2.56
RERE-208	ENST00000465125	SLC4A10	Q6U841	1118 aa		31.04	■■■□□ 2.56
RERE-208	ENST00000465125	ISCA1	Q9BUE6	129 aa		31.04	■■■□□ 2.56
RERE-208	ENST00000465125	PARP3	Q9Y6F1	533 aa		31.04	■■■□□ 2.56
RERE-208	ENST00000465125	UBN2	Q6ZU65	1347 aa		31.03	■■■□□ 2.56
RERE-208	ENST00000465125	DDR1	Q08345	913 aa		31.03	■■■□□ 2.56
RERE-208	ENST00000465125	PARP10	Q53GL7	1025 aa		31.03	■■■□□ 2.56
RERE-208	ENST00000465125	POLRMT	O00411	1230 aa	Known RBP	31.02	■■■□□ 2.56
RERE-208	ENST00000465125	TRIM27	P14373	513 aa		31.02	■■■□□ 2.56
RERE-208	ENST00000465125	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	31.02	■■■□□ 2.56
RERE-208	ENST00000465125	AFDN	P55196	1824 aa	Known RBP	31.01	■■■□□ 2.56
RERE-208	ENST00000465125	LINS1	Q8NG48	757 aa		31.01	■■■□□ 2.55
RERE-208	ENST00000465125	TRIM28	Q13263	835 aa	Known RBP	31	■■■□□ 2.55
RERE-208	ENST00000465125	NLRP10	Q86W26	655 aa		31	■■■□□ 2.55
RERE-208	ENST00000465125	FAM177B	A6PVY3	158 aa		30.99	■■■□□ 2.55
RERE-208	ENST00000465125	IGKV5-2	P06315	115 aa		30.99	■■■□□ 2.55
RERE-208	ENST00000465125	BEND3	Q5T5X7	828 aa		30.99	■■■□□ 2.55
RERE-208	ENST00000465125	NBPF5P	Q86XG9	351 aa	Predicted RBP	30.99	■■■□□ 2.55
RERE-208	ENST00000465125	IBTK	Q9P2D0	1353 aa	Predicted RBP	30.99	■■■□□ 2.55
RERE-208	ENST00000465125	ABCC4	O15439	1325 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	N4BP2	Q86UW6	1770 aa	Predicted RBP	30.98	■■■□□ 2.55
RERE-208	ENST00000465125	NEURL1B	A8MQ27	555 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	SERPINB2	P05120	415 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	CWF19L2	Q2TBE0	894 aa	Known RBP	30.98	■■■□□ 2.55
RERE-208	ENST00000465125	PPP1R42	Q7Z4L9	355 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	CCDC191	Q8NCU4	936 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	SGIP1	Q9BQI5	828 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	SRCIN1	Q9C0H9	1055 aa		30.98	■■■□□ 2.55
RERE-208	ENST00000465125	CWC25	Q9NXE8	425 aa	Predicted RBP	30.98	■■■□□ 2.55
RERE-208	ENST00000465125	NPHP1	O15259	732 aa		30.97	■■■□□ 2.55
RERE-208	ENST00000465125	PTGER2	P43116	358 aa		30.97	■■■□□ 2.55
RERE-208	ENST00000465125	SUSD4	Q5VX71	490 aa		30.97	■■■□□ 2.55
RERE-208	ENST00000465125	FTSJ3	Q8IY81	847 aa	Known RBP	30.97	■■■□□ 2.55

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