RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 TRIM63Q969Q1 353 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 NUP85Q9BW27 656 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 IQCGQ9H095 443 aaKnown RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 UTP6Q9NYH9 597 aaKnown RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 USP47Q96K76 1375 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 LCMT1Q9UIC8 334 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 ILF2Q12905 390 aaKnown RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 SNW1Q13573 536 aaKnown RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 CAMSAP2Q08AD1 1489 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 CFAP74Q9C0B2 1584 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 DONSONQ9NYP3 566 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 CALCOCO2Q13137 446 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 BZW1Q7L1Q6 419 aaKnown RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 ELMSAN1Q6PJG2 1045 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 API5Q9BZZ5 524 aaKnown RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 FAN1Q9Y2M0 1017 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 APOBRQ0VD83 1088 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 CIZ1Q9ULV3 898 aaPredicted RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 A0A1B0GUA9 196 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 PDE1CQ14123 709 aaPredicted RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 CCDC77Q9BR77 488 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 FSD2A1L4K1 749 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 C1orf141Q5JVX7 400 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 ARFGAP2Q8N6H7 521 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 THOC2Q8NI27 1593 aaKnown RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 PDCD2Q16342 344 aaPredicted RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 FKBP15Q5T1M5 1219 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 ZSCAN16Q9H4T2 348 aaPredicted RBP8.53□□□□□ -1.04
PBX1-204ENST00000465089 OLFML3Q9NRN5 406 aa8.53□□□□□ -1.04
PBX1-204ENST00000465089 RASSF7Q02833 373 aa8.52□□□□□ -1.04
PBX1-204ENST00000465089 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.04
PBX1-204ENST00000465089 ZNF131P52739 623 aa8.52□□□□□ -1.04
PBX1-204ENST00000465089 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.04
PBX1-204ENST00000465089 FMNL2Q96PY5 1086 aa8.52□□□□□ -1.04
PBX1-204ENST00000465089 CCDC78A2IDD5 438 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 CALM1P0DP23 149 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 CALM2P0DP24 149 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 CALM3P0DP25 149 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 NCBP1Q09161 790 aaKnown RBP8.52□□□□□ -1.05
PBX1-204ENST00000465089 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 CLUAP1Q96AJ1 413 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 DRC3Q9H069 523 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 ARHGAP5Q13017 1502 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 SNTNA6NMZ2 147 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 S100BP04271 92 aaPredicted RBP8.52□□□□□ -1.05
PBX1-204ENST00000465089 CTNNBL1Q8WYA6 563 aaPredicted RBP8.52□□□□□ -1.05
PBX1-204ENST00000465089 CHMP2BQ9UQN3 213 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 RGS3P49796 1198 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 NLRP5P59047 1200 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 HOOK2Q96ED9 719 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
PBX1-204ENST00000465089 IFT81Q8WYA0 676 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 WHAMMQ8TF30 809 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 TEKT1Q969V4 418 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 SLC17A8Q8NDX2 589 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 TRIM4Q9C037 500 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 RGS22Q8NE09 1264 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 ATP2A3Q93084 1043 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 SMARCAL1Q9NZC9 954 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 Q9H521 79 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 PAXBP1Q9Y5B6 917 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 NBPF1Q3BBV0 1214 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 CCDC65Q8IXS2 484 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 RABEP2Q9H5N1 569 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 GNAI3P08754 354 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 TEX11Q8IYF3 940 aa8.51□□□□□ -1.05
PBX1-204ENST00000465089 JPH2Q9BR39 696 aaPredicted RBP8.51□□□□□ -1.05
PBX1-204ENST00000465089 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
PBX1-204ENST00000465089 PAWRQ96IZ0 340 aaKnown RBP8.51□□□□□ -1.05
PBX1-204ENST00000465089 E2F4Q16254 413 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 APLFQ8IW19 511 aaPredicted RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 PRPF4BQ13523 1007 aaKnown RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 PSMD6Q15008 389 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 HSF2BPO75031 334 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 ZMAT2Q96NC0 199 aaKnown RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 DDX49Q9Y6V7 483 aaKnown RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 PYGLP06737 847 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 GSDMBQ8TAX9 411 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 ZFYVE27Q5T4F4 411 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 LMBR1Q8WVP7 490 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 SKILP12757 684 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 SLC8A3P57103 927 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 KIF6Q6ZMV9 814 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 CCDC117Q8IWD4 279 aaPredicted RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 LUC7L3O95232 432 aaKnown RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 HSPA4P34932 840 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 KRT222Q8N1A0 295 aa8.5□□□□□ -1.05
PBX1-204ENST00000465089 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
PBX1-204ENST00000465089 TSGA10Q9BZW7 698 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms