RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 CD163Q86VB7 1156 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
UBR4-209ENST00000465036 ADARB2-AS1A8MUL3 147 aa9.92□□□□□ -0.82
UBR4-209ENST00000465036 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
UBR4-209ENST00000465036 USP17L3A6NCW0 530 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 USP17L4A6NCW7 530 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 ALAS2P22557 587 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 PSMA6P60900 246 aaKnown RBP9.91□□□□□ -0.82
UBR4-209ENST00000465036 CCDC102BQ68D86 513 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 USP17L2Q6R6M4 530 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 LRRC69Q6ZNQ3 347 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 USP17L1Q7RTZ2 530 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 TPCN2Q8NHX9 752 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 NEUROD4Q9HD90 331 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 ZNF232Q9UNY5 417 aa9.91□□□□□ -0.82
UBR4-209ENST00000465036 ATP9BO43861 1147 aa9.9□□□□□ -0.82
UBR4-209ENST00000465036 UBTFP17480 764 aaKnown RBP9.9□□□□□ -0.82
UBR4-209ENST00000465036 CLDN10P78369 228 aa9.9□□□□□ -0.82
UBR4-209ENST00000465036 SYT9Q86SS6 491 aa9.9□□□□□ -0.82
UBR4-209ENST00000465036 TNFRSF25Q93038 417 aa9.9□□□□□ -0.82
UBR4-209ENST00000465036 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
UBR4-209ENST00000465036 PALM3A6NDB9 673 aaPredicted RBP9.89□□□□□ -0.83
UBR4-209ENST00000465036 POM121CA8CG34 1229 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 CHRNA4P43681 627 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 KCNQ4P56696 695 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 HDGFL1Q5TGJ6 251 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 UCN2Q96RP3 112 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 PRDM6Q9NQX0 595 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 ANKIB1Q9P2G1 1089 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 KIAA1024Q9UPX6 916 aa9.89□□□□□ -0.83
UBR4-209ENST00000465036 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 SPATA31C1P0DKV0 1188 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 SIX5Q8N196 739 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 RHPN1Q8TCX5 695 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 PLVAPQ9BX97 442 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 CHMP3Q9Y3E7 222 aa9.88□□□□□ -0.83
UBR4-209ENST00000465036 FURINP09958 794 aa9.87□□□□□ -0.83
UBR4-209ENST00000465036 PRKCSHP14314 528 aaPredicted RBP9.87□□□□□ -0.83
UBR4-209ENST00000465036 TBCELQ5QJ74 424 aa9.87□□□□□ -0.83
UBR4-209ENST00000465036 STAG2Q8N3U4 1231 aa9.87□□□□□ -0.83
UBR4-209ENST00000465036 TSPAN10Q9H1Z9 355 aaPredicted RBP9.87□□□□□ -0.83
UBR4-209ENST00000465036 SFSWAPQ12872 951 aaKnown RBP9.86□□□□□ -0.83
UBR4-209ENST00000465036 SH3PXD2AQ5TCZ1 1133 aa9.86□□□□□ -0.83
UBR4-209ENST00000465036 OGFOD1Q8N543 542 aa9.86□□□□□ -0.83
UBR4-209ENST00000465036 MKRN1Q9UHC7 482 aaKnown RBP9.86□□□□□ -0.83
UBR4-209ENST00000465036 DKK1O94907 266 aa9.85□□□□□ -0.83
UBR4-209ENST00000465036 NEUROD1Q13562 356 aa9.85□□□□□ -0.83
UBR4-209ENST00000465036 GAS2L2Q8NHY3 880 aa9.85□□□□□ -0.83
UBR4-209ENST00000465036 SLC30A3Q99726 388 aa9.85□□□□□ -0.83
UBR4-209ENST00000465036 XP32Q5T750 250 aa9.84□□□□□ -0.83
UBR4-209ENST00000465036 SPEM2Q0P670 501 aa9.83□□□□□ -0.84
UBR4-209ENST00000465036 COL9A3Q14050 684 aaPredicted RBP9.83□□□□□ -0.84
UBR4-209ENST00000465036 PHACTR1Q9C0D0 580 aa9.83□□□□□ -0.84
UBR4-209ENST00000465036 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
UBR4-209ENST00000465036 BRD7Q9NPI1 651 aa9.83□□□□□ -0.84
UBR4-209ENST00000465036 HIF1AQ16665 826 aa9.82□□□□□ -0.84
UBR4-209ENST00000465036 STARD13Q9Y3M8 1113 aa9.82□□□□□ -0.84
UBR4-209ENST00000465036 HCN4Q9Y3Q4 1203 aa9.82□□□□□ -0.84
UBR4-209ENST00000465036 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
UBR4-209ENST00000465036 C21orf2O43822 256 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 TYRO3Q06418 890 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 PRRT3Q5FWE3 981 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 SUSD3Q96L08 255 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
UBR4-209ENST00000465036 GATA4P43694 442 aa9.8□□□□□ -0.84
UBR4-209ENST00000465036 MICALL1Q8N3F8 863 aa9.8□□□□□ -0.84
UBR4-209ENST00000465036 FNBP4Q8N3X1 1017 aaPredicted RBP9.8□□□□□ -0.84
UBR4-209ENST00000465036 TSEN2Q8NCE0 465 aaKnown RBP9.8□□□□□ -0.84
UBR4-209ENST00000465036 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
UBR4-209ENST00000465036 M0R082 166 aa9.79□□□□□ -0.84
UBR4-209ENST00000465036 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
UBR4-209ENST00000465036 ADH7P40394 386 aa9.79□□□□□ -0.84
UBR4-209ENST00000465036 ZNF417Q8TAU3 575 aa9.79□□□□□ -0.84
UBR4-209ENST00000465036 ZNF587Q96SQ5 575 aaPredicted RBP9.79□□□□□ -0.84
UBR4-209ENST00000465036 C2orf49Q9BVC5 232 aaPredicted RBP9.79□□□□□ -0.84
UBR4-209ENST00000465036 SFI1A8K8P3 1242 aa9.78□□□□□ -0.84
UBR4-209ENST00000465036 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
UBR4-209ENST00000465036 ALDH16A1Q8IZ83 802 aa9.78□□□□□ -0.84
UBR4-209ENST00000465036 ZNF280CQ8ND82 737 aa9.78□□□□□ -0.84
UBR4-209ENST00000465036 HSH2DQ96JZ2 352 aa9.78□□□□□ -0.84
UBR4-209ENST00000465036 ALBP02768 609 aa9.77□□□□□ -0.85
UBR4-209ENST00000465036 SEC13P55735 322 aa9.77□□□□□ -0.85
UBR4-209ENST00000465036 IER5Q5VY09 327 aa9.77□□□□□ -0.85
UBR4-209ENST00000465036 ZNF594Q96JF6 807 aaPredicted RBP9.77□□□□□ -0.85
UBR4-209ENST00000465036 NID1P14543 1247 aa9.76□□□□□ -0.85
UBR4-209ENST00000465036 NACC1Q96RE7 527 aa9.76□□□□□ -0.85
UBR4-209ENST00000465036 MAFBQ9Y5Q3 323 aaPredicted RBP9.76□□□□□ -0.85
UBR4-209ENST00000465036 APBA3O96018 575 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 RASA1P20936 1047 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 DOC2BQ14184 412 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 BTLAQ7Z6A9 289 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 Q8N3U1 123 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 GLMNQ92990 594 aa9.75□□□□□ -0.85
UBR4-209ENST00000465036 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
UBR4-209ENST00000465036 ITGB7P26010 798 aa9.74□□□□□ -0.85
UBR4-209ENST00000465036 TRIM28Q13263 835 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms