RNA–Protein interactions for RNA: ENST00000464748.1

CDK11A-211, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-211ENST00000464748 TWISTNBQ3B726 338 aaPredicted RBP25.86■■□□□ 1.73
CDK11A-211ENST00000464748 HYPKQ9NX55 129 aa25.86■■□□□ 1.73
CDK11A-211ENST00000464748 DDR1Q08345 913 aa25.85■■□□□ 1.73
CDK11A-211ENST00000464748 PROSER3Q2NL68 480 aa25.85■■□□□ 1.73
CDK11A-211ENST00000464748 TSPYL6Q8N831 410 aa25.85■■□□□ 1.73
CDK11A-211ENST00000464748 SPINK5Q9NQ38 1064 aaPredicted RBP25.85■■□□□ 1.73
CDK11A-211ENST00000464748 KIF13BQ9NQT8 1826 aa25.85■■□□□ 1.73
CDK11A-211ENST00000464748 CARMIL3Q8ND23 1372 aa25.84■■□□□ 1.73
CDK11A-211ENST00000464748 TBC1D9BQ66K14 1250 aa25.84■■□□□ 1.73
CDK11A-211ENST00000464748 KLHL34Q8N239 644 aa25.84■■□□□ 1.73
CDK11A-211ENST00000464748 NRXN2Q9P2S2 1712 aa25.84■■□□□ 1.73
CDK11A-211ENST00000464748 NUP98P52948 1817 aa25.84■■□□□ 1.73
CDK11A-211ENST00000464748 C10orf71Q711Q0 1435 aa25.83■■□□□ 1.73
CDK11A-211ENST00000464748 TTLL7Q6ZT98 887 aa25.83■■□□□ 1.73
CDK11A-211ENST00000464748 SETDB2Q96T68 719 aa25.83■■□□□ 1.73
CDK11A-211ENST00000464748 AFDNP55196 1824 aaKnown RBP25.82■■□□□ 1.72
CDK11A-211ENST00000464748 ANXA1P04083 346 aa25.82■■□□□ 1.72
CDK11A-211ENST00000464748 CACNA1FO60840 1977 aa25.82■■□□□ 1.72
CDK11A-211ENST00000464748 ATP10DQ9P241 1426 aa25.81■■□□□ 1.72
CDK11A-211ENST00000464748 EXOSC9Q06265 439 aaKnown RBP25.81■■□□□ 1.72
CDK11A-211ENST00000464748 BICDL1Q6ZP65 573 aa25.81■■□□□ 1.72
CDK11A-211ENST00000464748 COPS6Q7L5N1 327 aa25.81■■□□□ 1.72
CDK11A-211ENST00000464748 XAGE3Q8WTP9 111 aa25.81■■□□□ 1.72
CDK11A-211ENST00000464748 STK31Q9BXU1 1019 aa25.81■■□□□ 1.72
CDK11A-211ENST00000464748 SERPINB2P05120 415 aa25.8■■□□□ 1.72
CDK11A-211ENST00000464748 SLFN5Q08AF3 891 aa25.79■■□□□ 1.72
CDK11A-211ENST00000464748 HLFQ16534 295 aa25.79■■□□□ 1.72
CDK11A-211ENST00000464748 GIGYF2Q6Y7W6 1299 aaKnown RBP25.79■■□□□ 1.72
CDK11A-211ENST00000464748 ZBTB3Q9H5J0 574 aa25.79■■□□□ 1.72
CDK11A-211ENST00000464748 TGFB2P61812 414 aa25.78■■□□□ 1.72
CDK11A-211ENST00000464748 NIP7Q9Y221 180 aaKnown RBP eCLIP25.78■■□□□ 1.72
CDK11A-211ENST00000464748 VAMP4O75379 141 aa25.77■■□□□ 1.72
CDK11A-211ENST00000464748 AIMP1Q12904 312 aaKnown RBP25.77■■□□□ 1.72
CDK11A-211ENST00000464748 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
CDK11A-211ENST00000464748 DCAF8L1A6NGE4 600 aa25.76■■□□□ 1.71
CDK11A-211ENST00000464748 HNRNPUQ00839 825 aaKnown RBP eCLIP25.76■■□□□ 1.71
CDK11A-211ENST00000464748 PLBD2Q8NHP8 589 aa25.76■■□□□ 1.71
CDK11A-211ENST00000464748 ANKRD36CQ5JPF3 1778 aa25.75■■□□□ 1.71
CDK11A-211ENST00000464748 ANKRD13DQ6ZTN6 518 aa25.75■■□□□ 1.71
CDK11A-211ENST00000464748 NLGN2Q8NFZ4 835 aa25.75■■□□□ 1.71
CDK11A-211ENST00000464748 IBTKQ9P2D0 1353 aaPredicted RBP25.74■■□□□ 1.71
CDK11A-211ENST00000464748 CNBD1Q8NA66 436 aa25.74■■□□□ 1.71
CDK11A-211ENST00000464748 NPHP1O15259 732 aa25.73■■□□□ 1.71
CDK11A-211ENST00000464748 DDX58O95786 925 aaKnown RBP25.73■■□□□ 1.71
CDK11A-211ENST00000464748 NBPF5PQ86XG9 351 aaPredicted RBP25.73■■□□□ 1.71
CDK11A-211ENST00000464748 TRMT2AQ8IZ69 625 aaKnown RBP25.73■■□□□ 1.71
CDK11A-211ENST00000464748 NYXQ9GZU5 481 aa25.73■■□□□ 1.71
CDK11A-211ENST00000464748 KIAA1551Q9HCM1 1747 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 ST5P78524 1137 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 PARP10Q53GL7 1025 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 TPTE2Q6XPS3 522 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 ZNF34Q8IZ26 560 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 PDZRN3Q9UPQ7 1066 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
CDK11A-211ENST00000464748 TCIRG1Q13488 830 aa25.71■■□□□ 1.71
CDK11A-211ENST00000464748 PRR5LQ6MZQ0 368 aa25.71■■□□□ 1.71
CDK11A-211ENST00000464748 ZNF428Q96B54 188 aa25.71■■□□□ 1.71
CDK11A-211ENST00000464748 CDCA7LQ96GN5 454 aa25.71■■□□□ 1.71
CDK11A-211ENST00000464748 ARFGEF2Q9Y6D5 1785 aa25.71■■□□□ 1.71
CDK11A-211ENST00000464748 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
CDK11A-211ENST00000464748 SLC4A2P04920 1241 aa25.69■■□□□ 1.7
CDK11A-211ENST00000464748 CT47B1P0C2W7 299 aaPredicted RBP25.69■■□□□ 1.7
CDK11A-211ENST00000464748 PPP1R42Q7Z4L9 355 aa25.69■■□□□ 1.7
CDK11A-211ENST00000464748 BRIP1Q9BX63 1249 aa25.69■■□□□ 1.7
CDK11A-211ENST00000464748 N4BP2Q86UW6 1770 aaPredicted RBP25.69■■□□□ 1.7
CDK11A-211ENST00000464748 ZBED9Q6R2W3 1325 aa25.68■■□□□ 1.7
CDK11A-211ENST00000464748 RIC3Q7Z5B4 369 aa25.68■■□□□ 1.7
CDK11A-211ENST00000464748 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
CDK11A-211ENST00000464748 UBN2Q6ZU65 1347 aa25.67■■□□□ 1.7
CDK11A-211ENST00000464748 GPTP24298 496 aa25.67■■□□□ 1.7
CDK11A-211ENST00000464748 PDE6BP35913 854 aa25.67■■□□□ 1.7
CDK11A-211ENST00000464748 ANKRD31Q8N7Z5 1873 aa25.66■■□□□ 1.7
CDK11A-211ENST00000464748 BRCA1P38398 1863 aaKnown RBP25.66■■□□□ 1.7
CDK11A-211ENST00000464748 TCERG1O14776 1098 aaKnown RBP25.65■■□□□ 1.7
CDK11A-211ENST00000464748 DPEP1P16444 411 aa25.65■■□□□ 1.7
CDK11A-211ENST00000464748 GTF2E1P29083 439 aaPredicted RBP25.65■■□□□ 1.7
CDK11A-211ENST00000464748 DLEC1Q9Y238 1755 aa25.64■■□□□ 1.7
CDK11A-211ENST00000464748 RIC1Q4ADV7 1423 aa25.64■■□□□ 1.7
CDK11A-211ENST00000464748 A0A0G2JLW4 131 aa25.64■■□□□ 1.7
CDK11A-211ENST00000464748 FLIIQ13045 1269 aa25.64■■□□□ 1.7
CDK11A-211ENST00000464748 TRIM28Q13263 835 aaKnown RBP25.64■■□□□ 1.7
CDK11A-211ENST00000464748 KSR2Q6VAB6 950 aa25.64■■□□□ 1.7
CDK11A-211ENST00000464748 GPR162Q16538 588 aa25.63■■□□□ 1.69
CDK11A-211ENST00000464748 SUSD4Q5VX71 490 aa25.63■■□□□ 1.69
CDK11A-211ENST00000464748 NLRP10Q86W26 655 aa25.63■■□□□ 1.69
CDK11A-211ENST00000464748 ISCA1Q9BUE6 129 aa25.63■■□□□ 1.69
CDK11A-211ENST00000464748 UTP14AQ9BVJ6 771 aaKnown RBP25.63■■□□□ 1.69
CDK11A-211ENST00000464748 FAM177BA6PVY3 158 aa25.62■■□□□ 1.69
CDK11A-211ENST00000464748 H0YIN7 160 aa25.62■■□□□ 1.69
CDK11A-211ENST00000464748 NTSR2O95665 410 aa25.62■■□□□ 1.69
CDK11A-211ENST00000464748 G2E3Q7L622 706 aa25.61■■□□□ 1.69
CDK11A-211ENST00000464748 C2CD5Q86YS7 1000 aa25.61■■□□□ 1.69
CDK11A-211ENST00000464748 METTL22Q9BUU2 404 aaPredicted RBP25.61■■□□□ 1.69
CDK11A-211ENST00000464748 PIM2Q9P1W9 311 aa25.61■■□□□ 1.69
CDK11A-211ENST00000464748 MAP3K2Q9Y2U5 619 aa25.61■■□□□ 1.69
CDK11A-211ENST00000464748 PI4KAP2A4QPH2 592 aa25.6■■□□□ 1.69
CDK11A-211ENST00000464748 KCNA3P22001 575 aa25.6■■□□□ 1.69
CDK11A-211ENST00000464748 FKBP5Q13451 457 aaPredicted RBP25.6■■□□□ 1.69
CDK11A-211ENST00000464748 ALDH1L2Q3SY69 923 aa25.6■■□□□ 1.69
CDK11A-211ENST00000464748 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms