RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
RPP40-203ENST00000464646 RRP7AQ9Y3A4 280 aaKnown RBP18.24■□□□□ 0.51
RPP40-203ENST00000464646 DLEC1Q9Y238 1755 aa18.23■□□□□ 0.51
RPP40-203ENST00000464646 ANKRD31Q8N7Z5 1873 aa18.22■□□□□ 0.51
RPP40-203ENST00000464646 MYL6BP14649 208 aa18.22■□□□□ 0.51
RPP40-203ENST00000464646 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
RPP40-203ENST00000464646 RALBP1Q15311 655 aa18.21■□□□□ 0.51
RPP40-203ENST00000464646 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
RPP40-203ENST00000464646 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
RPP40-203ENST00000464646 CNKSR1Q969H4 720 aa18.21■□□□□ 0.51
RPP40-203ENST00000464646 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
RPP40-203ENST00000464646 RIPK4P57078 832 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 TPTE2Q6XPS3 522 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 KIF6Q6ZMV9 814 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
RPP40-203ENST00000464646 APLP1P51693 650 aa18.19■□□□□ 0.5
RPP40-203ENST00000464646 MASTLQ96GX5 879 aa18.19■□□□□ 0.5
RPP40-203ENST00000464646 TSPYL4Q9UJ04 414 aa18.19■□□□□ 0.5
RPP40-203ENST00000464646 NFKBIEO00221 500 aa18.18■□□□□ 0.5
RPP40-203ENST00000464646 EIF2S2P20042 333 aaKnown RBP18.18■□□□□ 0.5
RPP40-203ENST00000464646 HLFQ16534 295 aa18.18■□□□□ 0.5
RPP40-203ENST00000464646 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
RPP40-203ENST00000464646 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
RPP40-203ENST00000464646 DPY19L2Q6NUT2 758 aa18.18■□□□□ 0.5
RPP40-203ENST00000464646 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
RPP40-203ENST00000464646 COL11A2P13942 1736 aaPredicted RBP18.18■□□□□ 0.5
RPP40-203ENST00000464646 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
RPP40-203ENST00000464646 WDR43Q15061 677 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPP40-203ENST00000464646 PRPF40BQ6NWY9 871 aaKnown RBP18.17■□□□□ 0.5
RPP40-203ENST00000464646 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
RPP40-203ENST00000464646 TAOK3Q9H2K8 898 aa18.17■□□□□ 0.5
RPP40-203ENST00000464646 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
RPP40-203ENST00000464646 LAMB4A4D0S4 1761 aa18.17■□□□□ 0.5
RPP40-203ENST00000464646 GLTPD2A6NH11 291 aa18.16■□□□□ 0.5
RPP40-203ENST00000464646 SRGNP10124 158 aa18.16■□□□□ 0.5
RPP40-203ENST00000464646 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
RPP40-203ENST00000464646 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
RPP40-203ENST00000464646 TIAM2Q8IVF5 1701 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 KDM3BQ7LBC6 1761 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 SLX4Q8IY92 1834 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 GPTP24298 496 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 PRELPP51888 382 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
RPP40-203ENST00000464646 VEGFAP15692 232 aaPredicted RBP18.14■□□□□ 0.49
RPP40-203ENST00000464646 NPR1P16066 1061 aa18.14■□□□□ 0.49
RPP40-203ENST00000464646 LMOD3Q0VAK6 560 aa18.14■□□□□ 0.49
RPP40-203ENST00000464646 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
RPP40-203ENST00000464646 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
RPP40-203ENST00000464646 NECTIN2Q92692 538 aa18.14■□□□□ 0.49
RPP40-203ENST00000464646 MYBBP1AQ9BQG0 1328 aaKnown RBP18.14■□□□□ 0.49
RPP40-203ENST00000464646 ZC3H4Q9UPT8 1303 aaKnown RBP18.14■□□□□ 0.49
RPP40-203ENST00000464646 FSTL1Q12841 308 aa18.13■□□□□ 0.49
RPP40-203ENST00000464646 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
RPP40-203ENST00000464646 NYXQ9GZU5 481 aa18.13■□□□□ 0.49
RPP40-203ENST00000464646 MAP3K15Q6ZN16 1313 aa18.13■□□□□ 0.49
RPP40-203ENST00000464646 TMPOP42166 694 aaKnown RBP18.12■□□□□ 0.49
RPP40-203ENST00000464646 HTRA3P83110 453 aa18.12■□□□□ 0.49
RPP40-203ENST00000464646 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
RPP40-203ENST00000464646 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
RPP40-203ENST00000464646 NUP98P52948 1817 aa18.11■□□□□ 0.49
RPP40-203ENST00000464646 ERVV-1B6SEH8 477 aa18.1■□□□□ 0.49
RPP40-203ENST00000464646 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
RPP40-203ENST00000464646 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
RPP40-203ENST00000464646 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
RPP40-203ENST00000464646 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
RPP40-203ENST00000464646 TCERG1O14776 1098 aaKnown RBP18.09■□□□□ 0.49
RPP40-203ENST00000464646 ANXA1P04083 346 aa18.09■□□□□ 0.49
RPP40-203ENST00000464646 DDNO94850 711 aaPredicted RBP18.08■□□□□ 0.48
RPP40-203ENST00000464646 OLFM4Q6UX06 510 aa18.08■□□□□ 0.48
RPP40-203ENST00000464646 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
RPP40-203ENST00000464646 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
RPP40-203ENST00000464646 RGL2O15211 777 aa18.07■□□□□ 0.48
RPP40-203ENST00000464646 PPP1R42Q7Z4L9 355 aa18.07■□□□□ 0.48
RPP40-203ENST00000464646 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
RPP40-203ENST00000464646 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
RPP40-203ENST00000464646 LTBP3Q9NS15 1303 aa18.06■□□□□ 0.48
RPP40-203ENST00000464646 FKBP4Q02790 459 aaKnown RBP eCLIP18.06■□□□□ 0.48
RPP40-203ENST00000464646 SUSD4Q5VX71 490 aa18.06■□□□□ 0.48
RPP40-203ENST00000464646 RTKN2Q8IZC4 609 aa18.06■□□□□ 0.48
RPP40-203ENST00000464646 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
RPP40-203ENST00000464646 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
RPP40-203ENST00000464646 GIGYF2Q6Y7W6 1299 aaKnown RBP18.05■□□□□ 0.48
RPP40-203ENST00000464646 TMX4Q9H1E5 349 aaPredicted RBP18.05■□□□□ 0.48
RPP40-203ENST00000464646 SYNE4Q8N205 404 aa18.04■□□□□ 0.48
RPP40-203ENST00000464646 RBM17Q96I25 401 aaKnown RBP18.04■□□□□ 0.48
RPP40-203ENST00000464646 ADAMTS8Q9UP79 889 aa18.04■□□□□ 0.48
RPP40-203ENST00000464646 UBN2Q6ZU65 1347 aa18.03■□□□□ 0.48
RPP40-203ENST00000464646 KLRG2A4D1S0 409 aaPredicted RBP18.03■□□□□ 0.48
RPP40-203ENST00000464646 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
RPP40-203ENST00000464646 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
RPP40-203ENST00000464646 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
RPP40-203ENST00000464646 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
RPP40-203ENST00000464646 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 EAPPQ56P03 285 aaPredicted RBP18.02■□□□□ 0.48
RPP40-203ENST00000464646 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
RPP40-203ENST00000464646 C7orf43Q8WVR3 580 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms