RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 PRPF40BQ6NWY9 871 aaKnown RBP12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
RN7SL541P-201ENST00000464317 PRKAR2BP31323 418 aa12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 PIP4K2AP48426 406 aaPredicted RBP12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 PHACTR3Q96KR7 559 aa12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
RN7SL541P-201ENST00000464317 FER1L6Q2WGJ9 1857 aa12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 MKRN1Q9UHC7 482 aaKnown RBP12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
RN7SL541P-201ENST00000464317 SNRPA1P09661 255 aaKnown RBP12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 POTEJP0CG39 1038 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 NUDCQ9Y266 331 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 SIPA1L3O60292 1781 aaPredicted RBP12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
RN7SL541P-201ENST00000464317 PRAMEF22A3QJZ6 481 aa12.13□□□□□ -0.47
RN7SL541P-201ENST00000464317 NPR1P16066 1061 aa12.13□□□□□ -0.47
RN7SL541P-201ENST00000464317 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
RN7SL541P-201ENST00000464317 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
RN7SL541P-201ENST00000464317 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 MCM10Q7L590 875 aa12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 LDHDQ86WU2 507 aa12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 C7orf43Q8WVR3 580 aa12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 TAF1DQ9H5J8 278 aaPredicted RBP12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
RN7SL541P-201ENST00000464317 BCORQ6W2J9 1755 aa12.11□□□□□ -0.47
RN7SL541P-201ENST00000464317 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
RN7SL541P-201ENST00000464317 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
RN7SL541P-201ENST00000464317 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
RN7SL541P-201ENST00000464317 ZNF277Q9NRM2 450 aaPredicted RBP12.11□□□□□ -0.47
RN7SL541P-201ENST00000464317 CACNA1SQ13698 1873 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 PCNTO95613 3336 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 ARFGEF2Q9Y6D5 1785 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
RN7SL541P-201ENST00000464317 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 NBPF26B4DH59 902 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 RGL2O15211 777 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 NBPF10Q6P3W6 841 aaKnown RBP12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 NBPF15Q8N660 670 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 PASKQ96RG2 1323 aa12.09□□□□□ -0.47
RN7SL541P-201ENST00000464317 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
RN7SL541P-201ENST00000464317 EPHX2P34913 555 aa12.08□□□□□ -0.48
RN7SL541P-201ENST00000464317 HLFQ16534 295 aa12.08□□□□□ -0.48
RN7SL541P-201ENST00000464317 SYNE4Q8N205 404 aa12.08□□□□□ -0.48
RN7SL541P-201ENST00000464317 AIDAQ96BJ3 306 aa12.08□□□□□ -0.48
RN7SL541P-201ENST00000464317 FOXN1O15353 648 aa12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 PPP2R1AP30153 589 aa12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 NGEFQ8N5V2 710 aa12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 RNF123Q5XPI4 1314 aa12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 SCN4AP35499 1836 aa12.07□□□□□ -0.48
RN7SL541P-201ENST00000464317 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 NEFMP07197 916 aa12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 VEGFBP49765 207 aa12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 PNMA8AQ86V59 439 aaPredicted RBP12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 NYXQ9GZU5 481 aa12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 MIS18AQ9NYP9 233 aa12.06□□□□□ -0.48
RN7SL541P-201ENST00000464317 FZD9O00144 591 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 CTCFP49711 727 aaPredicted RBP12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 MAP1SQ66K74 1059 aaPredicted RBP12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 NUTM1Q86Y26 1132 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 CNTROBQ8N137 903 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 GPC2Q8N158 579 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 PNISRQ8TF01 805 aaKnown RBP12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 PSMD1Q99460 953 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
RN7SL541P-201ENST00000464317 ERVV-1B6SEH8 477 aa12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 EIF6P56537 245 aaKnown RBP12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 CC2D2BQ6DHV5 1058 aa12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 KIF6Q6ZMV9 814 aa12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 RRP7AQ9Y3A4 280 aaKnown RBP12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 GJA3Q9Y6H8 435 aa12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 ABCC12Q96J65 1359 aa12.04□□□□□ -0.48
RN7SL541P-201ENST00000464317 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
RN7SL541P-201ENST00000464317 DEFB115Q30KQ5 88 aa12.03□□□□□ -0.48
RN7SL541P-201ENST00000464317 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms