RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
RPA3-206ENST00000463632 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
RPA3-206ENST00000463632 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
RPA3-206ENST00000463632 SRGNP10124 158 aa16.32■□□□□ 0.2
RPA3-206ENST00000463632 SOGA3Q5TF21 947 aa16.32■□□□□ 0.2
RPA3-206ENST00000463632 CLEC4GQ6UXB4 293 aa16.32■□□□□ 0.2
RPA3-206ENST00000463632 TPTE2Q6XPS3 522 aa16.32■□□□□ 0.2
RPA3-206ENST00000463632 KLRG1Q96E93 195 aa16.32■□□□□ 0.2
RPA3-206ENST00000463632 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
RPA3-206ENST00000463632 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
RPA3-206ENST00000463632 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
RPA3-206ENST00000463632 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
RPA3-206ENST00000463632 NBPF26B4DH59 902 aa16.29■□□□□ 0.2
RPA3-206ENST00000463632 DDNO94850 711 aaPredicted RBP16.29■□□□□ 0.2
RPA3-206ENST00000463632 NPR1P16066 1061 aa16.29■□□□□ 0.2
RPA3-206ENST00000463632 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
RPA3-206ENST00000463632 NBPF10Q6P3W6 841 aaKnown RBP16.29■□□□□ 0.2
RPA3-206ENST00000463632 NBPF15Q8N660 670 aa16.29■□□□□ 0.2
RPA3-206ENST00000463632 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
RPA3-206ENST00000463632 MYL6BP14649 208 aa16.28■□□□□ 0.2
RPA3-206ENST00000463632 KIF6Q6ZMV9 814 aa16.28■□□□□ 0.2
RPA3-206ENST00000463632 THUMPD2Q9BTF0 503 aaKnown RBP16.28■□□□□ 0.2
RPA3-206ENST00000463632 PNNQ9H307 717 aaKnown RBP16.28■□□□□ 0.2
RPA3-206ENST00000463632 HLFQ16534 295 aa16.27■□□□□ 0.2
RPA3-206ENST00000463632 UBR2Q8IWV8 1755 aa16.27■□□□□ 0.2
RPA3-206ENST00000463632 ZNF277Q9NRM2 450 aaPredicted RBP16.26■□□□□ 0.19
RPA3-206ENST00000463632 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
RPA3-206ENST00000463632 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
RPA3-206ENST00000463632 LTBP3Q9NS15 1303 aa16.25■□□□□ 0.19
RPA3-206ENST00000463632 GPTP24298 496 aa16.25■□□□□ 0.19
RPA3-206ENST00000463632 NFE2L2Q16236 605 aa16.25■□□□□ 0.19
RPA3-206ENST00000463632 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
RPA3-206ENST00000463632 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
RPA3-206ENST00000463632 FKBP4Q02790 459 aaKnown RBP eCLIP16.24■□□□□ 0.19
RPA3-206ENST00000463632 OLFM4Q6UX06 510 aa16.24■□□□□ 0.19
RPA3-206ENST00000463632 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
RPA3-206ENST00000463632 RTKN2Q8IZC4 609 aa16.24■□□□□ 0.19
RPA3-206ENST00000463632 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
RPA3-206ENST00000463632 IQCA1LA6NCM1 817 aa16.23■□□□□ 0.19
RPA3-206ENST00000463632 POTECB2RU33 542 aa16.23■□□□□ 0.19
RPA3-206ENST00000463632 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
RPA3-206ENST00000463632 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
RPA3-206ENST00000463632 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
RPA3-206ENST00000463632 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
RPA3-206ENST00000463632 RPGRQ92834 1020 aaKnown RBP16.23■□□□□ 0.19
RPA3-206ENST00000463632 TSPYL4Q9UJ04 414 aa16.23■□□□□ 0.19
RPA3-206ENST00000463632 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
RPA3-206ENST00000463632 SCN7AQ01118 1682 aa16.22■□□□□ 0.19
RPA3-206ENST00000463632 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
RPA3-206ENST00000463632 TTLL7Q6ZT98 887 aa16.22■□□□□ 0.19
RPA3-206ENST00000463632 JMYQ8N9B5 988 aa16.22■□□□□ 0.19
RPA3-206ENST00000463632 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 ERVV-1B6SEH8 477 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 RGL2O15211 777 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 C7orf43Q8WVR3 580 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 PLEKHF1Q96S99 279 aa16.21■□□□□ 0.19
RPA3-206ENST00000463632 CAPN15O75808 1086 aa16.2■□□□□ 0.18
RPA3-206ENST00000463632 POTEIP0CG38 1075 aa16.2■□□□□ 0.18
RPA3-206ENST00000463632 POTEJP0CG39 1038 aa16.2■□□□□ 0.18
RPA3-206ENST00000463632 RIPK4P57078 832 aa16.2■□□□□ 0.18
RPA3-206ENST00000463632 JDP2Q8WYK2 163 aa16.2■□□□□ 0.18
RPA3-206ENST00000463632 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
RPA3-206ENST00000463632 MKRN1Q9UHC7 482 aaKnown RBP16.2■□□□□ 0.18
RPA3-206ENST00000463632 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
RPA3-206ENST00000463632 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 KLRG2A4D1S0 409 aaPredicted RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 HSPA1AP0DMV8 641 aaKnown RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 HSPA1BP0DMV9 641 aaKnown RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
RPA3-206ENST00000463632 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
RPA3-206ENST00000463632 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
RPA3-206ENST00000463632 SUSD4Q5VX71 490 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 LDHDQ86WU2 507 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 TNS4Q8IZW8 715 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
RPA3-206ENST00000463632 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 LAS1LQ9Y4W2 734 aaKnown RBP16.18■□□□□ 0.18
RPA3-206ENST00000463632 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
RPA3-206ENST00000463632 ZNF541Q9H0D2 1346 aa16.18■□□□□ 0.18
RPA3-206ENST00000463632 ABCC12Q96J65 1359 aa16.17■□□□□ 0.18
RPA3-206ENST00000463632 SBF1O95248 1867 aa16.17■□□□□ 0.18
RPA3-206ENST00000463632 EIF6P56537 245 aaKnown RBP16.17■□□□□ 0.18
RPA3-206ENST00000463632 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
RPA3-206ENST00000463632 AIMP1Q12904 312 aaKnown RBP16.17■□□□□ 0.18
RPA3-206ENST00000463632 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
RPA3-206ENST00000463632 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
RPA3-206ENST00000463632 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
RPA3-206ENST00000463632 CREBZFQ9NS37 354 aa16.16■□□□□ 0.18
RPA3-206ENST00000463632 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
RPA3-206ENST00000463632 ANXA1P04083 346 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 COL11A2P13942 1736 aaPredicted RBP16.15■□□□□ 0.18
RPA3-206ENST00000463632 EPHX2P34913 555 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 DDX10Q13206 875 aaKnown RBP16.15■□□□□ 0.18
RPA3-206ENST00000463632 RALBP1Q15311 655 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 CC2D2BQ6DHV5 1058 aa16.15■□□□□ 0.18
RPA3-206ENST00000463632 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms