RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 NYXQ9GZU5 481 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 MAP3K2Q9Y2U5 619 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
EPHA4-210ENST00000463446 NHSQ6T4R5 1651 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 MAP3K15Q6ZN16 1313 aa9.31□□□□□ -0.92
EPHA4-210ENST00000463446 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 GNPATO15228 680 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 ITPK1Q13572 414 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
EPHA4-210ENST00000463446 TPTE2Q6XPS3 522 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 RPAP2Q8IXW5 612 aaPredicted RBP9.3□□□□□ -0.92
EPHA4-210ENST00000463446 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 SETDB2Q96T68 719 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 PHAXQ9H814 394 aaKnown RBP9.3□□□□□ -0.92
EPHA4-210ENST00000463446 VIRMAQ69YN4 1812 aaKnown RBP9.3□□□□□ -0.92
EPHA4-210ENST00000463446 KCPQ6ZWJ8 1503 aa9.3□□□□□ -0.92
EPHA4-210ENST00000463446 DOT1LQ8TEK3 1739 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 PRAMEF22A3QJZ6 481 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
EPHA4-210ENST00000463446 HMMRO75330 724 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 GTF2E1P29083 439 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-210ENST00000463446 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-210ENST00000463446 LINC00116Q8NCU8 138 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 RWDD1Q9H446 243 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-210ENST00000463446 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
EPHA4-210ENST00000463446 ZBTB1Q9Y2K1 713 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 ABCC4O15439 1325 aa9.29□□□□□ -0.92
EPHA4-210ENST00000463446 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-210ENST00000463446 NPHP1O15259 732 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 PLIN1O60240 522 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 GNAI2P04899 355 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 UBTFL1P0CB47 393 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-210ENST00000463446 SLC15A2Q16348 729 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 BEND3Q5T5X7 828 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 PROM2Q8N271 834 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
EPHA4-210ENST00000463446 PPP4R2Q9NY27 417 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 ZBTB47Q9UFB7 747 aaPredicted RBP9.28□□□□□ -0.92
EPHA4-210ENST00000463446 PDZRN3Q9UPQ7 1066 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 BRWD3Q6RI45 1802 aa9.28□□□□□ -0.92
EPHA4-210ENST00000463446 UBR2Q8IWV8 1755 aa9.27□□□□□ -0.92
EPHA4-210ENST00000463446 SBF2Q86WG5 1849 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.27□□□□□ -0.93
EPHA4-210ENST00000463446 FKBP8Q14318 412 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 HSP90AB4PQ58FF6 505 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 G2E3Q7L622 706 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 LRP10Q7Z4F1 713 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-210ENST00000463446 MYD88Q99836 296 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 LRRC4BQ9NT99 713 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 TBC1D2BQ9UPU7 963 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 ATP10DQ9P241 1426 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 PAPPAQ13219 1627 aa9.27□□□□□ -0.93
EPHA4-210ENST00000463446 COL15A1P39059 1388 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 TOGARAM1Q9Y4F4 1720 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 GRM8O00222 908 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 KCNA4P22459 653 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 GCKRQ14397 625 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 EZH2Q15910 746 aaKnown RBP9.26□□□□□ -0.93
EPHA4-210ENST00000463446 PROSER3Q2NL68 480 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 ZNF34Q8IZ26 560 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 TMEM57Q8N5G2 664 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 UPF1Q92900 1129 aaKnown RBP eCLIP9.26□□□□□ -0.93
EPHA4-210ENST00000463446 AKT1S1Q96B36 256 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 UTP14AQ9BVJ6 771 aaKnown RBP9.26□□□□□ -0.93
EPHA4-210ENST00000463446 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 PXDNLA1KZ92 1463 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 BTAF1O14981 1849 aa9.26□□□□□ -0.93
EPHA4-210ENST00000463446 CICQ96RK0 1608 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-210ENST00000463446 NEURL1BA8MQ27 555 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 F6X3S4 739 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 CAMTA2O94983 1202 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 ANXA1P04083 346 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 PCCAP05165 728 aaPredicted RBP9.25□□□□□ -0.93
EPHA4-210ENST00000463446 PANK1Q8TE04 598 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 ISCA1Q9BUE6 129 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 ZBTB3Q9H5J0 574 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 ZBTB40Q9NUA8 1239 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 TRMT112Q9UI30 125 aaKnown RBP9.25□□□□□ -0.93
EPHA4-210ENST00000463446 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.93
EPHA4-210ENST00000463446 UTYO14607 1347 aa9.25□□□□□ -0.93
EPHA4-210ENST00000463446 H7C1W4 665 aa9.24□□□□□ -0.93
EPHA4-210ENST00000463446 TTLL7Q6ZT98 887 aa9.24□□□□□ -0.93
EPHA4-210ENST00000463446 USP44Q9H0E7 712 aa9.24□□□□□ -0.93
EPHA4-210ENST00000463446 PARP3Q9Y6F1 533 aa9.24□□□□□ -0.93
EPHA4-210ENST00000463446 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
EPHA4-210ENST00000463446 RGPD3A6NKT7 1758 aaPredicted RBP9.24□□□□□ -0.93
EPHA4-210ENST00000463446 RGPD4Q7Z3J3 1758 aa9.24□□□□□ -0.93
EPHA4-210ENST00000463446 C5P01031 1676 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 LAMB4A4D0S4 1761 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 PHF14O94880 888 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 ST5P78524 1137 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 SLC10A5Q5PT55 438 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 USPL1Q5W0Q7 1092 aa9.23□□□□□ -0.93
EPHA4-210ENST00000463446 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms